RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 OR51H1Q8NH63 302 aa12.65□□□□□ -0.38
SCFD2-201ENST00000388940 NANPQ8TBE9 248 aa12.65□□□□□ -0.38
SCFD2-201ENST00000388940 RXFP4Q8TDU9 374 aa12.65□□□□□ -0.38
SCFD2-201ENST00000388940 IL1F10Q8WWZ1 152 aa12.65□□□□□ -0.38
SCFD2-201ENST00000388940 ATP5SQ99766 215 aa12.65□□□□□ -0.38
SCFD2-201ENST00000388940 SLC35B3Q9H1N7 401 aa12.65□□□□□ -0.38
SCFD2-201ENST00000388940 TUBA4BQ9H853 241 aa12.65□□□□□ -0.38
SCFD2-201ENST00000388940 CDIPTO14735 213 aa12.64□□□□□ -0.39
SCFD2-201ENST00000388940 NXPH2O95156 264 aa12.64□□□□□ -0.39
SCFD2-201ENST00000388940 SELLP14151 372 aa12.64□□□□□ -0.39
SCFD2-201ENST00000388940 PPP1CCP36873 323 aaKnown RBP12.64□□□□□ -0.39
SCFD2-201ENST00000388940 ERVS71-1P61550 626 aa12.64□□□□□ -0.39
SCFD2-201ENST00000388940 RPL23AP62750 156 aaKnown RBP12.64□□□□□ -0.39
SCFD2-201ENST00000388940 PSG7Q13046 419 aa12.64□□□□□ -0.39
SCFD2-201ENST00000388940 OR1J1Q8NGS3 322 aa12.64□□□□□ -0.39
SCFD2-201ENST00000388940 C1QTNF9BB2RNN3 333 aa12.64□□□□□ -0.39
SCFD2-201ENST00000388940 TXNL1O43396 289 aa12.64□□□□□ -0.39
SCFD2-201ENST00000388940 LYZL6O75951 148 aa12.64□□□□□ -0.39
SCFD2-201ENST00000388940 DFFBO76075 338 aa12.64□□□□□ -0.39
SCFD2-201ENST00000388940 CST7O76096 145 aa12.64□□□□□ -0.39
SCFD2-201ENST00000388940 IGKV1-39P01597 117 aa12.64□□□□□ -0.39
SCFD2-201ENST00000388940 IGKV1D-39P04432 117 aa12.64□□□□□ -0.39
SCFD2-201ENST00000388940 CRYBA1P05813 215 aa12.64□□□□□ -0.39
SCFD2-201ENST00000388940 TUBG1P23258 451 aa12.64□□□□□ -0.39
SCFD2-201ENST00000388940 ALKBH6Q3KRA9 238 aa12.64□□□□□ -0.39
SCFD2-201ENST00000388940 SPSB3Q6PJ21 355 aa12.64□□□□□ -0.39
SCFD2-201ENST00000388940 DPPA3Q6W0C5 159 aa12.64□□□□□ -0.39
SCFD2-201ENST00000388940 C1orf162Q8NEQ5 155 aaPredicted RBP12.64□□□□□ -0.39
SCFD2-201ENST00000388940 TUBG2Q9NRH3 451 aa12.64□□□□□ -0.39
SCFD2-201ENST00000388940 WSB1Q9Y6I7 421 aa12.64□□□□□ -0.39
SCFD2-201ENST00000388940 AQP7O14520 342 aa12.63□□□□□ -0.39
SCFD2-201ENST00000388940 EIF3GO75821 320 aaKnown RBP eCLIP12.63□□□□□ -0.39
SCFD2-201ENST00000388940 COX5AP20674 150 aa12.63□□□□□ -0.39
SCFD2-201ENST00000388940 SULT1A1P50225 295 aa12.63□□□□□ -0.39
SCFD2-201ENST00000388940 ZNF295-AS1Q8N0V1 137 aa12.63□□□□□ -0.39
SCFD2-201ENST00000388940 TRIB1Q96RU8 372 aa12.63□□□□□ -0.39
SCFD2-201ENST00000388940 LIN7CQ9NUP9 197 aaKnown RBP12.63□□□□□ -0.39
SCFD2-201ENST00000388940 PPP1R14DQ9NXH3 145 aa12.63□□□□□ -0.39
SCFD2-201ENST00000388940 NKX2-8O15522 239 aa12.62□□□□□ -0.39
SCFD2-201ENST00000388940 IGKV3-15P01624 115 aa12.62□□□□□ -0.39
SCFD2-201ENST00000388940 TAS2R30P59541 319 aa12.62□□□□□ -0.39
SCFD2-201ENST00000388940 RELQ04864 619 aaPredicted RBP12.62□□□□□ -0.39
SCFD2-201ENST00000388940 Q6ZRM9 215 aa12.62□□□□□ -0.39
SCFD2-201ENST00000388940 BEND4Q6ZU67 534 aa12.62□□□□□ -0.39
SCFD2-201ENST00000388940 GCNT2Q8N0V5 402 aa12.62□□□□□ -0.39
SCFD2-201ENST00000388940 KLF14Q8TD94 323 aaPredicted RBP12.62□□□□□ -0.39
SCFD2-201ENST00000388940 KCNJ16Q9NPI9 418 aa12.62□□□□□ -0.39
SCFD2-201ENST00000388940 TRAV39A0A0B4J263 110 aa12.62□□□□□ -0.39
SCFD2-201ENST00000388940 HAND1O96004 215 aa12.62□□□□□ -0.39
SCFD2-201ENST00000388940 EPHA1P21709 976 aa12.62□□□□□ -0.39
SCFD2-201ENST00000388940 CCL11P51671 97 aa12.62□□□□□ -0.39
SCFD2-201ENST00000388940 ZNF585BQ52M93 769 aa12.62□□□□□ -0.39
SCFD2-201ENST00000388940 AWAT1Q58HT5 328 aa12.62□□□□□ -0.39
SCFD2-201ENST00000388940 FDCSPQ8NFU4 85 aa12.62□□□□□ -0.39
SCFD2-201ENST00000388940 RPS10P5Q9NQ39 176 aa12.62□□□□□ -0.39
SCFD2-201ENST00000388940 KIAA1456Q9P272 454 aa12.62□□□□□ -0.39
SCFD2-201ENST00000388940 FBXO7Q9Y3I1 522 aa12.62□□□□□ -0.39
SCFD2-201ENST00000388940 RFNGQ9Y644 331 aa12.62□□□□□ -0.39
SCFD2-201ENST00000388940 WDFY4Q6ZS81 3184 aa12.62□□□□□ -0.39
SCFD2-201ENST00000388940 FAM186AA6NE01 2351 aa12.62□□□□□ -0.39
SCFD2-201ENST00000388940 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.61□□□□□ -0.39
SCFD2-201ENST00000388940 C7orf77A4D0Y5 90 aa12.61□□□□□ -0.39
SCFD2-201ENST00000388940 H0YL77 283 aa12.61□□□□□ -0.39
SCFD2-201ENST00000388940 IGKV1-5P01602 117 aa12.61□□□□□ -0.39
SCFD2-201ENST00000388940 MPV17P39210 176 aa12.61□□□□□ -0.39
SCFD2-201ENST00000388940 KIR2DL2P43627 348 aaPredicted RBP12.61□□□□□ -0.39
SCFD2-201ENST00000388940 RNF212Q495C1 297 aa12.61□□□□□ -0.39
SCFD2-201ENST00000388940 TMEM217Q8N7C4 229 aa12.61□□□□□ -0.39
SCFD2-201ENST00000388940 WDR31Q8NA23 367 aa12.61□□□□□ -0.39
SCFD2-201ENST00000388940 ZBTB34Q8NCN2 500 aa12.61□□□□□ -0.39
SCFD2-201ENST00000388940 ABHD14AQ9BUJ0 271 aa12.61□□□□□ -0.39
SCFD2-201ENST00000388940 TOLLIPQ9H0E2 274 aa12.61□□□□□ -0.39
SCFD2-201ENST00000388940 PPP1R3CQ9UQK1 317 aa12.61□□□□□ -0.39
SCFD2-201ENST00000388940 TRAV17A0A0B4J275 112 aa12.61□□□□□ -0.39
SCFD2-201ENST00000388940 MED19A0JLT2 244 aaPredicted RBP12.61□□□□□ -0.39
SCFD2-201ENST00000388940 RBFOX3A6NFN3 312 aa12.61□□□□□ -0.39
SCFD2-201ENST00000388940 RNF212BA8MTL3 300 aa12.61□□□□□ -0.39
SCFD2-201ENST00000388940 SYNGR2O43760 224 aa12.61□□□□□ -0.39
SCFD2-201ENST00000388940 NXPH3O95157 252 aa12.61□□□□□ -0.39
SCFD2-201ENST00000388940 GRPP07492 148 aa12.61□□□□□ -0.39
SCFD2-201ENST00000388940 CEACAM6P40199 344 aa12.61□□□□□ -0.39
SCFD2-201ENST00000388940 RHEBQ15382 184 aa12.61□□□□□ -0.39
SCFD2-201ENST00000388940 SLC35E4Q6ICL7 350 aa12.61□□□□□ -0.39
SCFD2-201ENST00000388940 ETV3LQ6ZN32 361 aa12.61□□□□□ -0.39
SCFD2-201ENST00000388940 C11orf53Q8IXP5 236 aa12.61□□□□□ -0.39
SCFD2-201ENST00000388940 RNASE11Q8TAA1 199 aaKnown RBP12.61□□□□□ -0.39
SCFD2-201ENST00000388940 CLCC1Q96S66 551 aa12.61□□□□□ -0.39
SCFD2-201ENST00000388940 TCEAL7Q9BRU2 100 aa12.61□□□□□ -0.39
SCFD2-201ENST00000388940 KCNIP1Q9NZI2 227 aa12.61□□□□□ -0.39
SCFD2-201ENST00000388940 CACNG5Q9UF02 275 aa12.61□□□□□ -0.39
SCFD2-201ENST00000388940 RBM7Q9Y580 266 aaKnown RBP12.61□□□□□ -0.39
SCFD2-201ENST00000388940 TMEM30CPA0ZSE6 113 aa12.6□□□□□ -0.39
SCFD2-201ENST00000388940 MLNRO43193 412 aa12.6□□□□□ -0.39
SCFD2-201ENST00000388940 IGHV2-70P01814 119 aa12.6□□□□□ -0.39
SCFD2-201ENST00000388940 CCL20P78556 96 aa12.6□□□□□ -0.39
SCFD2-201ENST00000388940 AKR1C8PQ5T2L2 129 aa12.6□□□□□ -0.39
SCFD2-201ENST00000388940 PRR18Q8N4B5 295 aa12.6□□□□□ -0.39
SCFD2-201ENST00000388940 DRAM1Q8N682 238 aa12.6□□□□□ -0.39
SCFD2-201ENST00000388940 ARL6IP6Q8N6S5 226 aa12.6□□□□□ -0.39
SCFD2-201ENST00000388940 PRR7Q8TB68 274 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms