RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 SYT3Q9BQG1 590 aa16.38■□□□□ 0.21
SSU72-204ENST00000378726 SIRPB1O00241 398 aa16.38■□□□□ 0.21
SSU72-204ENST00000378726 SH2D1BO14796 132 aa16.38■□□□□ 0.21
SSU72-204ENST00000378726 GAPDHP04406 335 aaKnown RBP16.38■□□□□ 0.21
SSU72-204ENST00000378726 KLF3P57682 345 aaPredicted RBP16.38■□□□□ 0.21
SSU72-204ENST00000378726 MZT1Q08AG7 82 aa16.38■□□□□ 0.21
SSU72-204ENST00000378726 HABP2Q14520 560 aaPredicted RBP16.38■□□□□ 0.21
SSU72-204ENST00000378726 SMCO1Q147U7 214 aa16.38■□□□□ 0.21
SSU72-204ENST00000378726 WDR82Q6UXN9 313 aa16.38■□□□□ 0.21
SSU72-204ENST00000378726 C20orf204Q6ZNR8 217 aa16.38■□□□□ 0.21
SSU72-204ENST00000378726 WFDC8Q8IUA0 241 aa16.38■□□□□ 0.21
SSU72-204ENST00000378726 MRPL30Q8TCC3 161 aaKnown RBP16.38■□□□□ 0.21
SSU72-204ENST00000378726 CLCC1Q96S66 551 aa16.38■□□□□ 0.21
SSU72-204ENST00000378726 HES4Q9HCC6 221 aa16.38■□□□□ 0.21
SSU72-204ENST00000378726 ARID1AO14497 2285 aa16.38■□□□□ 0.21
SSU72-204ENST00000378726 SCTP09683 121 aa16.37■□□□□ 0.21
SSU72-204ENST00000378726 CASP6P55212 293 aa16.37■□□□□ 0.21
SSU72-204ENST00000378726 SP6Q3SY56 376 aa16.37■□□□□ 0.21
SSU72-204ENST00000378726 TMEM108Q6UXF1 575 aa16.37■□□□□ 0.21
SSU72-204ENST00000378726 TOMM40LQ969M1 308 aa16.37■□□□□ 0.21
SSU72-204ENST00000378726 SMCO4Q9NRQ5 59 aa16.37■□□□□ 0.21
SSU72-204ENST00000378726 SLC33A1O00400 549 aaPredicted RBP16.37■□□□□ 0.21
SSU72-204ENST00000378726 WNT9BO14905 357 aa16.37■□□□□ 0.21
SSU72-204ENST00000378726 IFNA21P01568 189 aa16.37■□□□□ 0.21
SSU72-204ENST00000378726 GLP1RP43220 463 aa16.37■□□□□ 0.21
SSU72-204ENST00000378726 FXYD4P59646 89 aa16.37■□□□□ 0.21
SSU72-204ENST00000378726 SPIN3Q5JUX0 258 aa16.37■□□□□ 0.21
SSU72-204ENST00000378726 LYPD6BQ8NI32 183 aa16.37■□□□□ 0.21
SSU72-204ENST00000378726 ZCCHC14Q8WYQ9 949 aaKnown RBP16.37■□□□□ 0.21
SSU72-204ENST00000378726 C14orf79Q96F83 325 aa16.37■□□□□ 0.21
SSU72-204ENST00000378726 ATP23Q9Y6H3 246 aa16.37■□□□□ 0.21
SSU72-204ENST00000378726 TRDCB7Z8K6 153 aa16.36■□□□□ 0.21
SSU72-204ENST00000378726 ZNF728P0DKX0 622 aa16.36■□□□□ 0.21
SSU72-204ENST00000378726 RPS23P62266 143 aaKnown RBP16.36■□□□□ 0.21
SSU72-204ENST00000378726 FIP1L1Q6UN15 594 aaKnown RBP16.36■□□□□ 0.21
SSU72-204ENST00000378726 OR14J1Q9UGF5 321 aa16.36■□□□□ 0.21
SSU72-204ENST00000378726 POMT1Q9Y6A1 747 aa16.36■□□□□ 0.21
SSU72-204ENST00000378726 IGLV3-9A0A075B6K5 115 aa16.35■□□□□ 0.21
SSU72-204ENST00000378726 TRBV6-6A0A0A6YYG2 114 aa16.35■□□□□ 0.21
SSU72-204ENST00000378726 KIR2DS1A0A191URI9 304 aa16.35■□□□□ 0.21
SSU72-204ENST00000378726 MBPP02686 304 aaPredicted RBP16.35■□□□□ 0.21
SSU72-204ENST00000378726 THBDP07204 575 aa16.35■□□□□ 0.21
SSU72-204ENST00000378726 SMIM6P0DI80 62 aa16.35■□□□□ 0.21
SSU72-204ENST00000378726 FOLR2P14207 255 aa16.35■□□□□ 0.21
SSU72-204ENST00000378726 PTAFRP25105 342 aa16.35■□□□□ 0.21
SSU72-204ENST00000378726 KIR2DS4P43632 304 aa16.35■□□□□ 0.21
SSU72-204ENST00000378726 PPT1P50897 306 aa16.35■□□□□ 0.21
SSU72-204ENST00000378726 PIGPP57054 158 aa16.35■□□□□ 0.21
SSU72-204ENST00000378726 HOXA4Q00056 320 aaPredicted RBP16.35■□□□□ 0.21
SSU72-204ENST00000378726 KIR2DS1Q14954 304 aa16.35■□□□□ 0.21
SSU72-204ENST00000378726 WFDC1Q9HC57 220 aa16.35■□□□□ 0.21
SSU72-204ENST00000378726 LINC00587B1AMM8 73 aa16.35■□□□□ 0.21
SSU72-204ENST00000378726 S100A8P05109 93 aa16.35■□□□□ 0.21
SSU72-204ENST00000378726 SELENOVP59797 346 aa16.35■□□□□ 0.21
SSU72-204ENST00000378726 RAB5BP61020 215 aa16.35■□□□□ 0.21
SSU72-204ENST00000378726 SNRPEP62304 92 aaKnown RBP16.35■□□□□ 0.21
SSU72-204ENST00000378726 NANPQ8TBE9 248 aa16.35■□□□□ 0.21
SSU72-204ENST00000378726 DPRXA6NFQ7 191 aa16.34■□□□□ 0.21
SSU72-204ENST00000378726 HAND1O96004 215 aa16.34■□□□□ 0.21
SSU72-204ENST00000378726 S100A9P06702 114 aaKnown RBP16.34■□□□□ 0.21
SSU72-204ENST00000378726 FABP1P07148 127 aa16.34■□□□□ 0.21
SSU72-204ENST00000378726 AADACP22760 399 aa16.34■□□□□ 0.21
SSU72-204ENST00000378726 CD200P41217 278 aa16.34■□□□□ 0.21
SSU72-204ENST00000378726 CA7P43166 264 aa16.34■□□□□ 0.21
SSU72-204ENST00000378726 ACP7Q6ZNF0 438 aa16.34■□□□□ 0.21
SSU72-204ENST00000378726 UBAC2Q8NBM4 344 aa16.34■□□□□ 0.21
SSU72-204ENST00000378726 ST6GALNAC3Q8NDV1 305 aa16.34■□□□□ 0.21
SSU72-204ENST00000378726 MOB3AQ96BX8 217 aa16.34■□□□□ 0.21
SSU72-204ENST00000378726 MRPL37Q9BZE1 423 aaKnown RBP16.34■□□□□ 0.21
SSU72-204ENST00000378726 RPS10P5Q9NQ39 176 aa16.34■□□□□ 0.21
SSU72-204ENST00000378726 TAAR3PQ9P1P4 343 aa16.34■□□□□ 0.21
SSU72-204ENST00000378726 SHANK1Q9Y566 2161 aa16.34■□□□□ 0.21
SSU72-204ENST00000378726 POLEQ07864 2286 aa16.34■□□□□ 0.21
SSU72-204ENST00000378726 TK1P04183 234 aa16.34■□□□□ 0.21
SSU72-204ENST00000378726 OR5AC1P0C628 307 aa16.34■□□□□ 0.21
SSU72-204ENST00000378726 MDH2P40926 338 aaKnown RBP16.34■□□□□ 0.21
SSU72-204ENST00000378726 CEBPDP49716 269 aaPredicted RBP16.34■□□□□ 0.21
SSU72-204ENST00000378726 TMEM187Q14656 261 aa16.34■□□□□ 0.21
SSU72-204ENST00000378726 MIDNQ504T8 468 aa16.34■□□□□ 0.21
SSU72-204ENST00000378726 ZNF880Q6PDB4 577 aa16.34■□□□□ 0.21
SSU72-204ENST00000378726 C15orf54Q8N8G6 183 aa16.34■□□□□ 0.21
SSU72-204ENST00000378726 HIST1H2BAQ96A08 127 aa16.34■□□□□ 0.21
SSU72-204ENST00000378726 EGLN1Q9GZT9 426 aa16.34■□□□□ 0.21
SSU72-204ENST00000378726 ARV1Q9H2C2 271 aa16.34■□□□□ 0.21
SSU72-204ENST00000378726 PLEKHA2Q9HB19 425 aa16.34■□□□□ 0.21
SSU72-204ENST00000378726 TREM2Q9NZC2 230 aa16.34■□□□□ 0.21
SSU72-204ENST00000378726 KPTNQ9Y664 436 aa16.34■□□□□ 0.21
SSU72-204ENST00000378726 SPRY3O43610 288 aa16.33■□□□□ 0.2
SSU72-204ENST00000378726 TSPAN15O95858 294 aa16.33■□□□□ 0.2
SSU72-204ENST00000378726 SNCAP37840 140 aa16.33■□□□□ 0.2
SSU72-204ENST00000378726 HERV-K104P61576 105 aa16.33■□□□□ 0.2
SSU72-204ENST00000378726 PLPPR1Q8TBJ4 325 aa16.33■□□□□ 0.2
SSU72-204ENST00000378726 ZNF251Q9BRH9 671 aa16.33■□□□□ 0.2
SSU72-204ENST00000378726 SCRT1Q9BWW7 348 aa16.33■□□□□ 0.2
SSU72-204ENST00000378726 ATRXP46100 2492 aa16.33■□□□□ 0.2
SSU72-204ENST00000378726 DIRAS3O95661 229 aa16.33■□□□□ 0.2
SSU72-204ENST00000378726 PPYP01298 95 aa16.33■□□□□ 0.2
SSU72-204ENST00000378726 CTXN2P0C2S0 81 aa16.33■□□□□ 0.2
SSU72-204ENST00000378726 FHITP49789 147 aa16.33■□□□□ 0.2
SSU72-204ENST00000378726 UCP3P55916 312 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms