RNA–Protein interactions for RNA: ENST00000377507.7

TNFRSF9-201, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF9, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-201ENST00000377507 IL1F10Q8WWZ1 152 aa9.94□□□□□ -0.82
TNFRSF9-201ENST00000377507 MED13Q9UHV7 2174 aa9.93□□□□□ -0.82
TNFRSF9-201ENST00000377507 IQCF6A8MYZ5 107 aa9.93□□□□□ -0.82
TNFRSF9-201ENST00000377507 SYNGR2O43760 224 aa9.93□□□□□ -0.82
TNFRSF9-201ENST00000377507 SCAF4O95104 1147 aaKnown RBP9.93□□□□□ -0.82
TNFRSF9-201ENST00000377507 NXPH3O95157 252 aa9.93□□□□□ -0.82
TNFRSF9-201ENST00000377507 CELA3BP08861 270 aa9.93□□□□□ -0.82
TNFRSF9-201ENST00000377507 OR8U8P0C7N1 319 aa9.93□□□□□ -0.82
TNFRSF9-201ENST00000377507 RPS23P62266 143 aaKnown RBP9.93□□□□□ -0.82
TNFRSF9-201ENST00000377507 EIF2S3LQ2VIR3 472 aaKnown RBP9.93□□□□□ -0.82
TNFRSF9-201ENST00000377507 ACSF3Q4G176 576 aaPredicted RBP9.93□□□□□ -0.82
TNFRSF9-201ENST00000377507 DHRS13Q6UX07 377 aa9.93□□□□□ -0.82
TNFRSF9-201ENST00000377507 C1QL4Q86Z23 238 aa9.93□□□□□ -0.82
TNFRSF9-201ENST00000377507 OR10G4Q8NGN3 311 aa9.93□□□□□ -0.82
TNFRSF9-201ENST00000377507 OR2J1Q9GZK6 312 aa9.93□□□□□ -0.82
TNFRSF9-201ENST00000377507 HES4Q9HCC6 221 aa9.93□□□□□ -0.82
TNFRSF9-201ENST00000377507 CACNG5Q9UF02 275 aa9.93□□□□□ -0.82
TNFRSF9-201ENST00000377507 TRAPPC2LQ9UL33 140 aa9.93□□□□□ -0.82
TNFRSF9-201ENST00000377507 DNAJC13O75165 2243 aa9.93□□□□□ -0.82
TNFRSF9-201ENST00000377507 A0A087WWC5 75 aa9.92□□□□□ -0.82
TNFRSF9-201ENST00000377507 A0A1W2PPE2 198 aa9.92□□□□□ -0.82
TNFRSF9-201ENST00000377507 TMEM210A6NLX4 147 aa9.92□□□□□ -0.82
TNFRSF9-201ENST00000377507 SIRPB1O00241 398 aa9.92□□□□□ -0.82
TNFRSF9-201ENST00000377507 SH2D1BO14796 132 aa9.92□□□□□ -0.82
TNFRSF9-201ENST00000377507 EIF3GO75821 320 aaKnown RBP eCLIP9.92□□□□□ -0.82
TNFRSF9-201ENST00000377507 IGHV2-5P01817 119 aa9.92□□□□□ -0.82
TNFRSF9-201ENST00000377507 ARG1P05089 322 aa9.92□□□□□ -0.82
TNFRSF9-201ENST00000377507 IGHV1-2P23083 117 aa9.92□□□□□ -0.82
TNFRSF9-201ENST00000377507 TGFBR3Q03167 851 aa9.92□□□□□ -0.82
TNFRSF9-201ENST00000377507 HAGHQ16775 308 aa9.92□□□□□ -0.82
TNFRSF9-201ENST00000377507 KHDC3LQ587J8 217 aa9.92□□□□□ -0.82
TNFRSF9-201ENST00000377507 HES3Q5TGS1 186 aa9.92□□□□□ -0.82
TNFRSF9-201ENST00000377507 FAM24BQ8N5W8 94 aa9.92□□□□□ -0.82
TNFRSF9-201ENST00000377507 TMEM178AQ8NBL3 297 aa9.92□□□□□ -0.82
TNFRSF9-201ENST00000377507 PSMG3Q9BT73 122 aaPredicted RBP9.92□□□□□ -0.82
TNFRSF9-201ENST00000377507 PARD6GQ9BYG4 376 aaPredicted RBP9.92□□□□□ -0.82
TNFRSF9-201ENST00000377507 TOLLIPQ9H0E2 274 aa9.92□□□□□ -0.82
TNFRSF9-201ENST00000377507 LIN7CQ9NUP9 197 aaKnown RBP9.92□□□□□ -0.82
TNFRSF9-201ENST00000377507 MUC3AQ02505 3323 aa9.92□□□□□ -0.82
TNFRSF9-201ENST00000377507 TRAV39A0A0B4J263 110 aa9.92□□□□□ -0.82
TNFRSF9-201ENST00000377507 H3BQ15 152 aa9.92□□□□□ -0.82
TNFRSF9-201ENST00000377507 M0R296 226 aa9.92□□□□□ -0.82
TNFRSF9-201ENST00000377507 CDIPTO14735 213 aa9.92□□□□□ -0.82
TNFRSF9-201ENST00000377507 PPIHO43447 177 aaKnown RBP9.92□□□□□ -0.82
TNFRSF9-201ENST00000377507 IFNA5P01569 189 aa9.92□□□□□ -0.82
TNFRSF9-201ENST00000377507 RAB2AP61019 212 aa9.92□□□□□ -0.82
TNFRSF9-201ENST00000377507 GUSBP1Q15486 140 aa9.92□□□□□ -0.82
TNFRSF9-201ENST00000377507 IZUMO4Q1ZYL8 232 aa9.92□□□□□ -0.82
TNFRSF9-201ENST00000377507 KRBOX4Q5JUW0 171 aa9.92□□□□□ -0.82
TNFRSF9-201ENST00000377507 INO80CQ6PI98 192 aaPredicted RBP9.92□□□□□ -0.82
TNFRSF9-201ENST00000377507 HEPN1Q6WQI6 88 aa9.92□□□□□ -0.82
TNFRSF9-201ENST00000377507 THNSL2Q86YJ6 484 aa9.92□□□□□ -0.82
TNFRSF9-201ENST00000377507 DRAM1Q8N682 238 aa9.92□□□□□ -0.82
TNFRSF9-201ENST00000377507 MBD3L1Q8WWY6 194 aa9.92□□□□□ -0.82
TNFRSF9-201ENST00000377507 MUCL1Q96DR8 90 aa9.92□□□□□ -0.82
TNFRSF9-201ENST00000377507 CLCF1Q9UBD9 225 aa9.92□□□□□ -0.82
TNFRSF9-201ENST00000377507 METTL1Q9UBP6 276 aaKnown RBP9.92□□□□□ -0.82
TNFRSF9-201ENST00000377507 PPP1R3CQ9UQK1 317 aa9.92□□□□□ -0.82
TNFRSF9-201ENST00000377507 PUS1Q9Y606 427 aaKnown RBP eCLIP9.92□□□□□ -0.82
TNFRSF9-201ENST00000377507 hCG_1809904A0A1W2PP81 198 aa9.91□□□□□ -0.82
TNFRSF9-201ENST00000377507 A0A1W2PR64 198 aa9.91□□□□□ -0.82
TNFRSF9-201ENST00000377507 A0A1W2PRV1 198 aa9.91□□□□□ -0.82
TNFRSF9-201ENST00000377507 FAM90A26D6RGX4 464 aa9.91□□□□□ -0.82
TNFRSF9-201ENST00000377507 IGHG3P01860 377 aa9.91□□□□□ -0.82
TNFRSF9-201ENST00000377507 HOXB1P14653 301 aaPredicted RBP9.91□□□□□ -0.82
TNFRSF9-201ENST00000377507 SELEP16581 610 aa9.91□□□□□ -0.82
TNFRSF9-201ENST00000377507 TNFSF10P50591 281 aa9.91□□□□□ -0.82
TNFRSF9-201ENST00000377507 ERVS71-1P61550 626 aa9.91□□□□□ -0.82
TNFRSF9-201ENST00000377507 ARG2P78540 354 aa9.91□□□□□ -0.82
TNFRSF9-201ENST00000377507 S100A12P80511 92 aa9.91□□□□□ -0.82
TNFRSF9-201ENST00000377507 PSG7Q13046 419 aa9.91□□□□□ -0.82
TNFRSF9-201ENST00000377507 ALKBH6Q3KRA9 238 aa9.91□□□□□ -0.82
TNFRSF9-201ENST00000377507 ATP1A1-AS1Q5TC04 95 aa9.91□□□□□ -0.82
TNFRSF9-201ENST00000377507 HAPLN4Q86UW8 402 aa9.91□□□□□ -0.82
TNFRSF9-201ENST00000377507 ZNF525Q8N782 197 aa9.91□□□□□ -0.82
TNFRSF9-201ENST00000377507 ZBTB34Q8NCN2 500 aa9.91□□□□□ -0.82
TNFRSF9-201ENST00000377507 SLC25A40Q8TBP6 338 aa9.91□□□□□ -0.82
TNFRSF9-201ENST00000377507 CDH20Q9HBT6 801 aa9.91□□□□□ -0.82
TNFRSF9-201ENST00000377507 RNF150Q9ULK6 438 aa9.91□□□□□ -0.82
TNFRSF9-201ENST00000377507 COL6A3P12111 3177 aa9.91□□□□□ -0.82
TNFRSF9-201ENST00000377507 LOC102723971A0A1B0GUV8 181 aa9.9□□□□□ -0.82
TNFRSF9-201ENST00000377507 A0A1W2PPE3 182 aa9.9□□□□□ -0.82
TNFRSF9-201ENST00000377507 PCP4L1A6NKN8 68 aa9.9□□□□□ -0.82
TNFRSF9-201ENST00000377507 H3BP45 60 aa9.9□□□□□ -0.82
TNFRSF9-201ENST00000377507 NXPH2O95156 264 aa9.9□□□□□ -0.82
TNFRSF9-201ENST00000377507 OR2C1O95371 312 aa9.9□□□□□ -0.82
TNFRSF9-201ENST00000377507 S100A8P05109 93 aa9.9□□□□□ -0.82
TNFRSF9-201ENST00000377507 CEACAM6P40199 344 aa9.9□□□□□ -0.82
TNFRSF9-201ENST00000377507 IDH3GP51553 393 aaPredicted RBP9.9□□□□□ -0.82
TNFRSF9-201ENST00000377507 UBE2NP61088 152 aaKnown RBP9.9□□□□□ -0.82
TNFRSF9-201ENST00000377507 ARL16Q0P5N6 197 aa9.9□□□□□ -0.82
TNFRSF9-201ENST00000377507 TMEM267Q0VDI3 215 aaPredicted RBP9.9□□□□□ -0.82
TNFRSF9-201ENST00000377507 EIF4EBP1Q13541 118 aaPredicted RBP9.9□□□□□ -0.82
TNFRSF9-201ENST00000377507 LRRC75BQ2VPJ9 315 aa9.9□□□□□ -0.82
TNFRSF9-201ENST00000377507 P4HA3Q7Z4N8 544 aa9.9□□□□□ -0.82
TNFRSF9-201ENST00000377507 VASH2Q86V25 355 aa9.9□□□□□ -0.82
TNFRSF9-201ENST00000377507 C11orf53Q8IXP5 236 aa9.9□□□□□ -0.82
TNFRSF9-201ENST00000377507 RNASE11Q8TAA1 199 aaKnown RBP9.9□□□□□ -0.82
TNFRSF9-201ENST00000377507 RAB39BQ96DA2 213 aa9.9□□□□□ -0.82
TNFRSF9-201ENST00000377507 SEBOXQ9HB31 216 aaPredicted RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms