RNA–Protein interactions for RNA: ENST00000375167.1

H2AFX-201, Transcript of H2A histone family member X, humanhuman

TSL 2

Gene H2AFX, Length 1,373 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFX-201ENST00000375167 PMS2P11Q13670 270 aa13.44□□□□□ -0.26
H2AFX-201ENST00000375167 RBM39Q14498 530 aaKnown RBP13.44□□□□□ -0.26
H2AFX-201ENST00000375167 HNF4GQ14541 408 aa13.44□□□□□ -0.26
H2AFX-201ENST00000375167 ZNF146Q15072 292 aa13.44□□□□□ -0.26
H2AFX-201ENST00000375167 NEDD8Q15843 81 aa13.44□□□□□ -0.26
H2AFX-201ENST00000375167 SPIN3Q5JUX0 258 aa13.44□□□□□ -0.26
H2AFX-201ENST00000375167 PRAMEF5Q5TYX0 476 aa13.44□□□□□ -0.26
H2AFX-201ENST00000375167 TRAPPC6BQ86SZ2 158 aa13.44□□□□□ -0.26
H2AFX-201ENST00000375167 PXT1Q8NFP0 134 aa13.44□□□□□ -0.26
H2AFX-201ENST00000375167 ARPC1AQ92747 370 aa13.44□□□□□ -0.26
H2AFX-201ENST00000375167 TOMM40LQ969M1 308 aa13.44□□□□□ -0.26
H2AFX-201ENST00000375167 RPEQ96AT9 228 aa13.44□□□□□ -0.26
H2AFX-201ENST00000375167 UBE2E2Q96LR5 201 aa13.44□□□□□ -0.26
H2AFX-201ENST00000375167 TMED9Q9BVK6 235 aa13.44□□□□□ -0.26
H2AFX-201ENST00000375167 MRPS26Q9BYN8 205 aaKnown RBP13.44□□□□□ -0.26
H2AFX-201ENST00000375167 KRTAP4-5Q9BYR2 181 aa13.44□□□□□ -0.26
H2AFX-201ENST00000375167 GNB4Q9HAV0 340 aa13.44□□□□□ -0.26
H2AFX-201ENST00000375167 HMG20AQ9NP66 347 aa13.44□□□□□ -0.26
H2AFX-201ENST00000375167 PLA2G2EQ9NZK7 142 aa13.44□□□□□ -0.26
H2AFX-201ENST00000375167 TRAV8-7A0A075B6U6 113 aa13.43□□□□□ -0.26
H2AFX-201ENST00000375167 PSMB8P28062 276 aa13.43□□□□□ -0.26
H2AFX-201ENST00000375167 ZNF93P35789 620 aaPredicted RBP13.43□□□□□ -0.26
H2AFX-201ENST00000375167 GNB1P62873 340 aa13.43□□□□□ -0.26
H2AFX-201ENST00000375167 ACSM3Q53FZ2 586 aa13.43□□□□□ -0.26
H2AFX-201ENST00000375167 SYT6Q5T7P8 510 aaPredicted RBP13.43□□□□□ -0.26
H2AFX-201ENST00000375167 DDI2Q5TDH0 399 aa13.43□□□□□ -0.26
H2AFX-201ENST00000375167 BAIAP2L2Q6UXY1 529 aa13.43□□□□□ -0.26
H2AFX-201ENST00000375167 DLX4Q92988 240 aaPredicted RBP13.43□□□□□ -0.26
H2AFX-201ENST00000375167 OR5B12Q96R08 314 aa13.43□□□□□ -0.26
H2AFX-201ENST00000375167 NDUFB11Q9NX14 153 aa13.43□□□□□ -0.26
H2AFX-201ENST00000375167 GLS2Q9UI32 602 aa13.43□□□□□ -0.26
H2AFX-201ENST00000375167 VSIG4Q9Y279 399 aa13.43□□□□□ -0.26
H2AFX-201ENST00000375167 LY6LH3BQJ8 138 aa13.42□□□□□ -0.26
H2AFX-201ENST00000375167 GABRPO00591 440 aa13.42□□□□□ -0.26
H2AFX-201ENST00000375167 HAND1O96004 215 aa13.42□□□□□ -0.26
H2AFX-201ENST00000375167 CALCBP10092 127 aa13.42□□□□□ -0.26
H2AFX-201ENST00000375167 PTGFRP43088 359 aa13.42□□□□□ -0.26
H2AFX-201ENST00000375167 PITPNAQ00169 270 aa13.42□□□□□ -0.26
H2AFX-201ENST00000375167 CFHR3Q02985 330 aa13.42□□□□□ -0.26
H2AFX-201ENST00000375167 ELP2Q6IA86 826 aa13.42□□□□□ -0.26
H2AFX-201ENST00000375167 ASCL4Q6XD76 172 aa13.42□□□□□ -0.26
H2AFX-201ENST00000375167 TPRX1Q8N7U7 411 aa13.42□□□□□ -0.26
H2AFX-201ENST00000375167 NKAIN3Q8N8D7 197 aa13.42□□□□□ -0.26
H2AFX-201ENST00000375167 MYOZ3Q8TDC0 251 aa13.42□□□□□ -0.26
H2AFX-201ENST00000375167 TNFAIP8L1Q8WVP5 186 aa13.42□□□□□ -0.26
H2AFX-201ENST00000375167 OR51J1Q9H342 316 aa13.42□□□□□ -0.26
H2AFX-201ENST00000375167 GAL3ST2Q9H3Q3 398 aa13.42□□□□□ -0.26
H2AFX-201ENST00000375167 IL36RNQ9UBH0 155 aa13.42□□□□□ -0.26
H2AFX-201ENST00000375167 GSTK1Q9Y2Q3 226 aa13.42□□□□□ -0.26
H2AFX-201ENST00000375167 SH2D1BO14796 132 aa13.41□□□□□ -0.26
H2AFX-201ENST00000375167 DUSP1P28562 367 aa13.41□□□□□ -0.26
H2AFX-201ENST00000375167 CD34P28906 385 aa13.41□□□□□ -0.26
H2AFX-201ENST00000375167 PSMD7P51665 324 aa13.41□□□□□ -0.26
H2AFX-201ENST00000375167 PRRX1P54821 245 aa13.41□□□□□ -0.26
H2AFX-201ENST00000375167 HSD17B12Q53GQ0 312 aa13.41□□□□□ -0.26
H2AFX-201ENST00000375167 CDH26Q8IXH8 852 aa13.41□□□□□ -0.26
H2AFX-201ENST00000375167 SNX22Q96L94 193 aa13.41□□□□□ -0.26
H2AFX-201ENST00000375167 NABP2Q9BQ15 211 aa13.41□□□□□ -0.26
H2AFX-201ENST00000375167 FAM192AQ9GZU8 254 aa13.41□□□□□ -0.26
H2AFX-201ENST00000375167 ABCG5Q9H222 651 aa13.41□□□□□ -0.26
H2AFX-201ENST00000375167 ZNF286AQ9HBT8 521 aa13.41□□□□□ -0.26
H2AFX-201ENST00000375167 SSR3Q9UNL2 185 aa13.41□□□□□ -0.26
H2AFX-201ENST00000375167 CEPT1Q9Y6K0 416 aa13.41□□□□□ -0.26
H2AFX-201ENST00000375167 PKHD1P08F94 4074 aa13.41□□□□□ -0.26
H2AFX-201ENST00000375167 TMEM82A0PJX8 343 aa13.4□□□□□ -0.26
H2AFX-201ENST00000375167 SC5DO75845 299 aa13.4□□□□□ -0.26
H2AFX-201ENST00000375167 BRI3O95415 125 aa13.4□□□□□ -0.26
H2AFX-201ENST00000375167 CDK2P24941 298 aa13.4□□□□□ -0.26
H2AFX-201ENST00000375167 SLURP1P55000 103 aa13.4□□□□□ -0.26
H2AFX-201ENST00000375167 INSL4Q14641 139 aa13.4□□□□□ -0.26
H2AFX-201ENST00000375167 RSU1Q15404 277 aa13.4□□□□□ -0.26
H2AFX-201ENST00000375167 TMEM65Q6PI78 240 aa13.4□□□□□ -0.26
H2AFX-201ENST00000375167 CEACAM19Q7Z692 300 aa13.4□□□□□ -0.26
H2AFX-201ENST00000375167 HAPLN4Q86UW8 402 aa13.4□□□□□ -0.26
H2AFX-201ENST00000375167 TGIF2LXQ8IUE1 241 aa13.4□□□□□ -0.26
H2AFX-201ENST00000375167 MUL1Q969V5 352 aa13.4□□□□□ -0.26
H2AFX-201ENST00000375167 S100A13Q99584 98 aa13.4□□□□□ -0.26
H2AFX-201ENST00000375167 LIN7CQ9NUP9 197 aaKnown RBP13.4□□□□□ -0.26
H2AFX-201ENST00000375167 UBE2J1Q9Y385 318 aaPredicted RBP13.4□□□□□ -0.26
H2AFX-201ENST00000375167 IGKV1D-33P01593 117 aa13.39□□□□□ -0.27
H2AFX-201ENST00000375167 IGKV1-33P01594 117 aa13.39□□□□□ -0.27
H2AFX-201ENST00000375167 MAS1P04201 325 aa13.39□□□□□ -0.27
H2AFX-201ENST00000375167 OR5H8P0DN80 308 aa13.39□□□□□ -0.27
H2AFX-201ENST00000375167 SNU13P55769 128 aaKnown RBP13.39□□□□□ -0.27
H2AFX-201ENST00000375167 HEPN1Q6WQI6 88 aa13.39□□□□□ -0.27
H2AFX-201ENST00000375167 ZNF491Q8N8L2 437 aa13.39□□□□□ -0.27
H2AFX-201ENST00000375167 TMEM203Q969S6 136 aa13.39□□□□□ -0.27
H2AFX-201ENST00000375167 METTL9Q9H1A3 318 aa13.39□□□□□ -0.27
H2AFX-201ENST00000375167 EXOSC4Q9NPD3 245 aaKnown RBP13.39□□□□□ -0.27
H2AFX-201ENST00000375167 IL36GQ9NZH8 169 aa13.39□□□□□ -0.27
H2AFX-201ENST00000375167 STUB1Q9UNE7 303 aa13.39□□□□□ -0.27
H2AFX-201ENST00000375167 ING4Q9UNL4 249 aa13.39□□□□□ -0.27
H2AFX-201ENST00000375167 NCBP2LA6PVI3 153 aaKnown RBP13.38□□□□□ -0.27
H2AFX-201ENST00000375167 CDRT1O95170 752 aa13.38□□□□□ -0.27
H2AFX-201ENST00000375167 OR2H2O95918 312 aa13.38□□□□□ -0.27
H2AFX-201ENST00000375167 GABRR1P24046 479 aa13.38□□□□□ -0.27
H2AFX-201ENST00000375167 MYL9P24844 172 aa13.38□□□□□ -0.27
H2AFX-201ENST00000375167 GRK1Q15835 563 aa13.38□□□□□ -0.27
H2AFX-201ENST00000375167 LGALS9CQ6DKI2 356 aa13.38□□□□□ -0.27
H2AFX-201ENST00000375167 GTSCR1Q86UQ5 136 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms