RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 GLO1Q04760 184 aa12.54□□□□□ -0.4
LMO4-201ENST00000370542 TBC1D28Q2M2D7 210 aa12.54□□□□□ -0.4
LMO4-201ENST00000370542 AWAT1Q58HT5 328 aa12.54□□□□□ -0.4
LMO4-201ENST00000370542 ASPHD2Q6ICH7 369 aa12.54□□□□□ -0.4
LMO4-201ENST00000370542 OR52W1Q6IF63 320 aa12.54□□□□□ -0.4
LMO4-201ENST00000370542 SLC25A47Q6Q0C1 308 aa12.54□□□□□ -0.4
LMO4-201ENST00000370542 Q6ZRG5 221 aa12.54□□□□□ -0.4
LMO4-201ENST00000370542 FOXL2NBQ6ZUU3 175 aa12.54□□□□□ -0.4
LMO4-201ENST00000370542 PNLDC1Q8NA58 520 aaKnown RBP12.54□□□□□ -0.4
LMO4-201ENST00000370542 ADAD2Q8NCV1 583 aaKnown RBP12.54□□□□□ -0.4
LMO4-201ENST00000370542 OR13D1Q8NGV5 346 aa12.54□□□□□ -0.4
LMO4-201ENST00000370542 OR5H2Q8NGV7 314 aa12.54□□□□□ -0.4
LMO4-201ENST00000370542 KCNG3Q8TAE7 436 aa12.54□□□□□ -0.4
LMO4-201ENST00000370542 MARCH1Q8TCQ1 289 aa12.54□□□□□ -0.4
LMO4-201ENST00000370542 MRGPRFQ96AM1 343 aa12.54□□□□□ -0.4
LMO4-201ENST00000370542 CPNE2Q96FN4 548 aaPredicted RBP12.54□□□□□ -0.4
LMO4-201ENST00000370542 URM1Q9BTM9 101 aaKnown RBP12.54□□□□□ -0.4
LMO4-201ENST00000370542 ABHD6Q9BV23 337 aa12.54□□□□□ -0.4
LMO4-201ENST00000370542 TAAR3PQ9P1P4 343 aa12.54□□□□□ -0.4
LMO4-201ENST00000370542 CGGBP1Q9UFW8 167 aaPredicted RBP12.54□□□□□ -0.4
LMO4-201ENST00000370542 SLC22A13Q9Y226 551 aa12.54□□□□□ -0.4
LMO4-201ENST00000370542 LRP12Q9Y561 859 aa12.54□□□□□ -0.4
LMO4-201ENST00000370542 IGKV1D-43A0A0B4J1Z2 117 aa12.53□□□□□ -0.4
LMO4-201ENST00000370542 CXorf65A6NEN9 183 aa12.53□□□□□ -0.4
LMO4-201ENST00000370542 TMEM14DPA8MWL7 114 aa12.53□□□□□ -0.4
LMO4-201ENST00000370542 K7EPK0 472 aa12.53□□□□□ -0.4
LMO4-201ENST00000370542 M0R036 132 aa12.53□□□□□ -0.4
LMO4-201ENST00000370542 DCTN6O00399 190 aa12.53□□□□□ -0.4
LMO4-201ENST00000370542 OR8U8P0C7N1 319 aa12.53□□□□□ -0.4
LMO4-201ENST00000370542 EGR1P18146 543 aa12.53□□□□□ -0.4
LMO4-201ENST00000370542 ACKR3P25106 362 aa12.53□□□□□ -0.4
LMO4-201ENST00000370542 CDX1P47902 265 aaPredicted RBP12.53□□□□□ -0.4
LMO4-201ENST00000370542 SELENOVP59797 346 aa12.53□□□□□ -0.4
LMO4-201ENST00000370542 ERVS71-1P61550 626 aa12.53□□□□□ -0.4
LMO4-201ENST00000370542 QRFPP83859 136 aa12.53□□□□□ -0.4
LMO4-201ENST00000370542 RBM39Q14498 530 aaKnown RBP12.53□□□□□ -0.4
LMO4-201ENST00000370542 GUK1Q16774 197 aa12.53□□□□□ -0.4
LMO4-201ENST00000370542 OR2B11Q5JQS5 317 aa12.53□□□□□ -0.4
LMO4-201ENST00000370542 GPR157Q5UAW9 335 aa12.53□□□□□ -0.4
LMO4-201ENST00000370542 FAM27BQ5VT28 67 aa12.53□□□□□ -0.4
LMO4-201ENST00000370542 RBMS3Q6XE24 437 aaKnown RBP12.53□□□□□ -0.4
LMO4-201ENST00000370542 LRRC18Q8N456 261 aa12.53□□□□□ -0.4
LMO4-201ENST00000370542 FAM71E2Q8N5Q1 922 aa12.53□□□□□ -0.4
LMO4-201ENST00000370542 OR4S1Q8NGB4 309 aa12.53□□□□□ -0.4
LMO4-201ENST00000370542 OR5D14Q8NGL3 314 aa12.53□□□□□ -0.4
LMO4-201ENST00000370542 C11orf40Q8WZ69 217 aa12.53□□□□□ -0.4
LMO4-201ENST00000370542 AKR1E2Q96JD6 320 aa12.53□□□□□ -0.4
LMO4-201ENST00000370542 POM121L2Q96KW2 1035 aa12.53□□□□□ -0.4
LMO4-201ENST00000370542 PFDN5Q99471 154 aa12.53□□□□□ -0.4
LMO4-201ENST00000370542 SLC35B3Q9H1N7 401 aa12.53□□□□□ -0.4
LMO4-201ENST00000370542 CDH20Q9HBT6 801 aa12.53□□□□□ -0.4
LMO4-201ENST00000370542 OR2S2Q9NQN1 319 aa12.53□□□□□ -0.4
LMO4-201ENST00000370542 C14orf166Q9Y224 244 aaKnown RBP12.53□□□□□ -0.4
LMO4-201ENST00000370542 RHBDD3Q9Y3P4 386 aa12.53□□□□□ -0.4
LMO4-201ENST00000370542 A0A087WWC5 75 aa12.52□□□□□ -0.41
LMO4-201ENST00000370542 SEC14L6B5MCN3 397 aa12.52□□□□□ -0.41
LMO4-201ENST00000370542 TXNL1O43396 289 aa12.52□□□□□ -0.41
LMO4-201ENST00000370542 SYT7O43581 403 aa12.52□□□□□ -0.41
LMO4-201ENST00000370542 PNPP00491 289 aa12.52□□□□□ -0.41
LMO4-201ENST00000370542 MSMBP08118 114 aa12.52□□□□□ -0.41
LMO4-201ENST00000370542 RPL12P30050 165 aaKnown RBP12.52□□□□□ -0.41
LMO4-201ENST00000370542 RBMXP38159 391 aaKnown RBP12.52□□□□□ -0.41
LMO4-201ENST00000370542 MMP16P51512 607 aa12.52□□□□□ -0.41
LMO4-201ENST00000370542 PLP2Q04941 152 aa12.52□□□□□ -0.41
LMO4-201ENST00000370542 MFGE8Q08431 387 aaPredicted RBP12.52□□□□□ -0.41
LMO4-201ENST00000370542 PCK2Q16822 640 aa12.52□□□□□ -0.41
LMO4-201ENST00000370542 ODF4Q2M2E3 257 aa12.52□□□□□ -0.41
LMO4-201ENST00000370542 MOGAT2Q3SYC2 334 aa12.52□□□□□ -0.41
LMO4-201ENST00000370542 KRBOX4Q5JUW0 171 aa12.52□□□□□ -0.41
LMO4-201ENST00000370542 LHFPL1Q86WI0 220 aa12.52□□□□□ -0.41
LMO4-201ENST00000370542 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.52□□□□□ -0.41
LMO4-201ENST00000370542 C1orf174Q8IYL3 243 aa12.52□□□□□ -0.41
LMO4-201ENST00000370542 TMEM186Q96B77 213 aa12.52□□□□□ -0.41
LMO4-201ENST00000370542 GGACTQ9BVM4 153 aa12.52□□□□□ -0.41
LMO4-201ENST00000370542 KCNK15Q9H427 330 aa12.52□□□□□ -0.41
LMO4-201ENST00000370542 FN3KRPQ9HA64 309 aa12.52□□□□□ -0.41
LMO4-201ENST00000370542 SIRT7Q9NRC8 400 aa12.52□□□□□ -0.41
LMO4-201ENST00000370542 GFOD1Q9NXC2 390 aa12.52□□□□□ -0.41
LMO4-201ENST00000370542 LOC100509620A0A075B734 347 aa12.51□□□□□ -0.41
LMO4-201ENST00000370542 E5RGE8 158 aa12.51□□□□□ -0.41
LMO4-201ENST00000370542 TCF21O43680 179 aa12.51□□□□□ -0.41
LMO4-201ENST00000370542 ADH4P08319 380 aa12.51□□□□□ -0.41
LMO4-201ENST00000370542 SNRNP70P08621 437 aaKnown RBP12.51□□□□□ -0.41
LMO4-201ENST00000370542 NR2C1P13056 603 aa12.51□□□□□ -0.41
LMO4-201ENST00000370542 ZNF32P17041 273 aa12.51□□□□□ -0.41
LMO4-201ENST00000370542 CDAP32320 146 aa12.51□□□□□ -0.41
LMO4-201ENST00000370542 WNT5AP41221 380 aa12.51□□□□□ -0.41
LMO4-201ENST00000370542 PSG4Q00888 419 aa12.51□□□□□ -0.41
LMO4-201ENST00000370542 RAB32Q13637 225 aa12.51□□□□□ -0.41
LMO4-201ENST00000370542 CLINT1Q14677 625 aa12.51□□□□□ -0.41
LMO4-201ENST00000370542 THEM4Q5T1C6 240 aa12.51□□□□□ -0.41
LMO4-201ENST00000370542 MBNL2Q5VZF2 373 aaKnown RBP12.51□□□□□ -0.41
LMO4-201ENST00000370542 RPL7L1Q6DKI1 246 aaKnown RBP12.51□□□□□ -0.41
LMO4-201ENST00000370542 ZNF101Q8IZC7 436 aa12.51□□□□□ -0.41
LMO4-201ENST00000370542 ZNF565Q8N9K5 539 aa12.51□□□□□ -0.41
LMO4-201ENST00000370542 MARS2Q96GW9 593 aaKnown RBP12.51□□□□□ -0.41
LMO4-201ENST00000370542 AMELYQ99218 206 aa12.51□□□□□ -0.41
LMO4-201ENST00000370542 C5orf66Q9H5L9 145 aa12.51□□□□□ -0.41
LMO4-201ENST00000370542 G6PC2Q9NQR9 355 aa12.51□□□□□ -0.41
LMO4-201ENST00000370542 HIF1ANQ9NWT6 349 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms