RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 RAB8AP61006 207 aa1.39□□□□□ -2.19
ECHDC1-201ENST00000368287 ANGPT1Q15389 498 aa1.39□□□□□ -2.19
ECHDC1-201ENST00000368287 ZNHIT3Q15649 155 aaPredicted RBP1.39□□□□□ -2.19
ECHDC1-201ENST00000368287 USF2Q15853 346 aaPredicted RBP1.39□□□□□ -2.19
ECHDC1-201ENST00000368287 TIMM23BQ5SRD1 257 aa1.39□□□□□ -2.19
ECHDC1-201ENST00000368287 TMEM75Q8N9X5 138 aa1.39□□□□□ -2.19
ECHDC1-201ENST00000368287 OR4P4Q8NGL7 312 aa1.39□□□□□ -2.19
ECHDC1-201ENST00000368287 C16orf95Q9H693 158 aa1.39□□□□□ -2.19
ECHDC1-201ENST00000368287 VPREB3Q9UKI3 123 aa1.39□□□□□ -2.19
ECHDC1-201ENST00000368287 WASHC3Q9Y3C0 194 aa1.39□□□□□ -2.19
ECHDC1-201ENST00000368287 ICE1Q9Y2F5 2266 aa1.39□□□□□ -2.19
ECHDC1-201ENST00000368287 MPDZO75970 2070 aa1.39□□□□□ -2.19
ECHDC1-201ENST00000368287 USP42Q9H9J4 1324 aaKnown RBP1.39□□□□□ -2.19
ECHDC1-201ENST00000368287 NUP153P49790 1475 aaKnown RBP1.38□□□□□ -2.19
ECHDC1-201ENST00000368287 OTOGLQ3ZCN5 2332 aa1.38□□□□□ -2.19
ECHDC1-201ENST00000368287 M0QX08 132 aa1.38□□□□□ -2.19
ECHDC1-201ENST00000368287 TOR1AO14656 332 aa1.38□□□□□ -2.19
ECHDC1-201ENST00000368287 SYNGR1O43759 233 aa1.38□□□□□ -2.19
ECHDC1-201ENST00000368287 RAB36O95755 333 aa1.38□□□□□ -2.19
ECHDC1-201ENST00000368287 GADD45AP24522 165 aa1.38□□□□□ -2.19
ECHDC1-201ENST00000368287 RCVRNP35243 200 aa1.38□□□□□ -2.19
ECHDC1-201ENST00000368287 STC1P52823 247 aa1.38□□□□□ -2.19
ECHDC1-201ENST00000368287 DLX6P56179 175 aa1.38□□□□□ -2.19
ECHDC1-201ENST00000368287 PAFAH1B3Q15102 231 aaKnown RBP1.38□□□□□ -2.19
ECHDC1-201ENST00000368287 TRMT12Q53H54 448 aaKnown RBP1.38□□□□□ -2.19
ECHDC1-201ENST00000368287 MTERF4Q7Z6M4 381 aaKnown RBP1.38□□□□□ -2.19
ECHDC1-201ENST00000368287 DTD1Q8TEA8 209 aa1.38□□□□□ -2.19
ECHDC1-201ENST00000368287 GALMQ96C23 342 aa1.38□□□□□ -2.19
ECHDC1-201ENST00000368287 CFAP53Q96M91 514 aa1.38□□□□□ -2.19
ECHDC1-201ENST00000368287 KLF6Q99612 283 aaPredicted RBP1.38□□□□□ -2.19
ECHDC1-201ENST00000368287 GTSF1LQ9H1H1 148 aa1.38□□□□□ -2.19
ECHDC1-201ENST00000368287 SPACA1Q9HBV2 294 aa1.38□□□□□ -2.19
ECHDC1-201ENST00000368287 TAS2R9Q9NYW1 312 aa1.38□□□□□ -2.19
ECHDC1-201ENST00000368287 CLUHO75153 1309 aa1.38□□□□□ -2.19
ECHDC1-201ENST00000368287 DSCAMO60469 2012 aa1.37□□□□□ -2.19
ECHDC1-201ENST00000368287 ADAMTS7Q9UKP4 1686 aa1.37□□□□□ -2.19
ECHDC1-201ENST00000368287 VPS37CA5D8V6 355 aaPredicted RBP1.37□□□□□ -2.19
ECHDC1-201ENST00000368287 C9J4A7 227 aa1.37□□□□□ -2.19
ECHDC1-201ENST00000368287 ZNF189O75820 626 aaPredicted RBP1.37□□□□□ -2.19
ECHDC1-201ENST00000368287 ORM2P19652 201 aa1.37□□□□□ -2.19
ECHDC1-201ENST00000368287 GZMHP20718 246 aa1.37□□□□□ -2.19
ECHDC1-201ENST00000368287 CSRP1P21291 193 aaKnown RBP1.37□□□□□ -2.19
ECHDC1-201ENST00000368287 KRTAP12-1P59990 96 aa1.37□□□□□ -2.19
ECHDC1-201ENST00000368287 ACTBP60709 375 aa1.37□□□□□ -2.19
ECHDC1-201ENST00000368287 ACTG1P63261 375 aa1.37□□□□□ -2.19
ECHDC1-201ENST00000368287 TMED1Q13445 227 aa1.37□□□□□ -2.19
ECHDC1-201ENST00000368287 HTR4Q13639 388 aa1.37□□□□□ -2.19
ECHDC1-201ENST00000368287 HES1Q14469 280 aa1.37□□□□□ -2.19
ECHDC1-201ENST00000368287 C4orf26Q17RF5 130 aa1.37□□□□□ -2.19
ECHDC1-201ENST00000368287 MESTQ5EB52 335 aa1.37□□□□□ -2.19
ECHDC1-201ENST00000368287 TTC33Q6PID6 262 aaPredicted RBP1.37□□□□□ -2.19
ECHDC1-201ENST00000368287 SDIM1Q6ZPB5 146 aa1.37□□□□□ -2.19
ECHDC1-201ENST00000368287 RIBC1Q8N443 379 aaPredicted RBP1.37□□□□□ -2.19
ECHDC1-201ENST00000368287 Q8NDZ9 215 aa1.37□□□□□ -2.19
ECHDC1-201ENST00000368287 TAMM41Q96BW9 452 aa1.37□□□□□ -2.19
ECHDC1-201ENST00000368287 GPR22Q99680 433 aa1.37□□□□□ -2.19
ECHDC1-201ENST00000368287 EBNA1BP2Q99848 306 aaKnown RBP1.37□□□□□ -2.19
ECHDC1-201ENST00000368287 AICDAQ9GZX7 198 aa1.37□□□□□ -2.19
ECHDC1-201ENST00000368287 C1orf109Q9NX04 203 aa1.37□□□□□ -2.19
ECHDC1-201ENST00000368287 COMMD9Q9P000 198 aa1.37□□□□□ -2.19
ECHDC1-201ENST00000368287 VWDEQ8N2E2 1590 aa1.37□□□□□ -2.19
ECHDC1-201ENST00000368287 MAP3K19Q56UN5 1328 aa1.37□□□□□ -2.19
ECHDC1-201ENST00000368287 LRPPRCP42704 1394 aaKnown RBP1.36□□□□□ -2.19
ECHDC1-201ENST00000368287 ERICH2A1L162 156 aa1.36□□□□□ -2.19
ECHDC1-201ENST00000368287 C19orf71A6NCJ1 209 aa1.36□□□□□ -2.19
ECHDC1-201ENST00000368287 A8MWP6 167 aa1.36□□□□□ -2.19
ECHDC1-201ENST00000368287 F5H5K5 113 aa1.36□□□□□ -2.19
ECHDC1-201ENST00000368287 F5H5T6 163 aa1.36□□□□□ -2.19
ECHDC1-201ENST00000368287 TP53I11O14683 189 aa1.36□□□□□ -2.19
ECHDC1-201ENST00000368287 PHYHO14832 338 aa1.36□□□□□ -2.19
ECHDC1-201ENST00000368287 NEMFO60524 1076 aa1.36□□□□□ -2.19
ECHDC1-201ENST00000368287 UGT2B11O75310 529 aa1.36□□□□□ -2.19
ECHDC1-201ENST00000368287 SOD1P00441 154 aa1.36□□□□□ -2.19
ECHDC1-201ENST00000368287 PVALBP20472 110 aaPredicted RBP1.36□□□□□ -2.19
ECHDC1-201ENST00000368287 PPP1CCP36873 323 aaKnown RBP1.36□□□□□ -2.19
ECHDC1-201ENST00000368287 PSMB3P49720 205 aa1.36□□□□□ -2.19
ECHDC1-201ENST00000368287 CLDN12P56749 244 aa1.36□□□□□ -2.19
ECHDC1-201ENST00000368287 LINC00313P59037 77 aa1.36□□□□□ -2.19
ECHDC1-201ENST00000368287 GTF2BQ00403 316 aa1.36□□□□□ -2.19
ECHDC1-201ENST00000368287 SPATA31B1PQ5VZV4 182 aa1.36□□□□□ -2.19
ECHDC1-201ENST00000368287 CRLF3Q8IUI8 442 aa1.36□□□□□ -2.19
ECHDC1-201ENST00000368287 ZBTB8OSQ8IWT0 167 aa1.36□□□□□ -2.19
ECHDC1-201ENST00000368287 DNAAF3Q8N9W5 541 aa1.36□□□□□ -2.19
ECHDC1-201ENST00000368287 OR8K1Q8NGG5 319 aa1.36□□□□□ -2.19
ECHDC1-201ENST00000368287 CCDC12Q8WUD4 166 aaPredicted RBP1.36□□□□□ -2.19
ECHDC1-201ENST00000368287 ATP6V1G3Q96LB4 118 aa1.36□□□□□ -2.19
ECHDC1-201ENST00000368287 C1QTNF6Q9BXI9 259 aa1.36□□□□□ -2.19
ECHDC1-201ENST00000368287 BCL2L14Q9BZR8 327 aa1.36□□□□□ -2.19
ECHDC1-201ENST00000368287 TUBA4BQ9H853 241 aa1.36□□□□□ -2.19
ECHDC1-201ENST00000368287 CCL26Q9Y258 94 aa1.36□□□□□ -2.19
ECHDC1-201ENST00000368287 MRPS16Q9Y3D3 137 aaKnown RBP1.36□□□□□ -2.19
ECHDC1-201ENST00000368287 MINOS1-NBL1R4GNA1 71 aa1.36□□□□□ -2.19
ECHDC1-201ENST00000368287 ADGRB3O60242 1522 aa1.35□□□□□ -2.19
ECHDC1-201ENST00000368287 TMEM94Q12767 1356 aa1.35□□□□□ -2.19
ECHDC1-201ENST00000368287 ODF3BA8MYP8 253 aa1.35□□□□□ -2.19
ECHDC1-201ENST00000368287 DENRO43583 198 aaKnown RBP1.35□□□□□ -2.19
ECHDC1-201ENST00000368287 CRTAPO75718 401 aaPredicted RBP1.35□□□□□ -2.19
ECHDC1-201ENST00000368287 CD99P14209 185 aa1.35□□□□□ -2.19
ECHDC1-201ENST00000368287 C1DQ13901 141 aaKnown RBP1.35□□□□□ -2.19
ECHDC1-201ENST00000368287 MAPK14Q16539 360 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms