RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 IGKV1-39P01597 117 aa16.59■□□□□ 0.25
COL13A1-201ENST00000354547 IGKV1D-39P04432 117 aa16.59■□□□□ 0.25
COL13A1-201ENST00000354547 RPS10P46783 165 aaKnown RBP16.59■□□□□ 0.25
COL13A1-201ENST00000354547 FGF8P55075 233 aaPredicted RBP16.59■□□□□ 0.25
COL13A1-201ENST00000354547 UBE2KP61086 200 aa16.59■□□□□ 0.25
COL13A1-201ENST00000354547 RHEBQ15382 184 aa16.59■□□□□ 0.25
COL13A1-201ENST00000354547 LCN15Q6UWW0 184 aa16.59■□□□□ 0.25
COL13A1-201ENST00000354547 USF3Q68DE3 2245 aa16.59■□□□□ 0.25
COL13A1-201ENST00000354547 TNRC6AQ8NDV7 1962 aaKnown RBP16.59■□□□□ 0.25
COL13A1-201ENST00000354547 LYZL6O75951 148 aa16.59■□□□□ 0.25
COL13A1-201ENST00000354547 NXPH2O95156 264 aa16.59■□□□□ 0.25
COL13A1-201ENST00000354547 IFNA5P01569 189 aa16.59■□□□□ 0.25
COL13A1-201ENST00000354547 SRSF7Q16629 238 aaKnown RBP eCLIP16.59■□□□□ 0.25
COL13A1-201ENST00000354547 ZNF295-AS1Q8N0V1 137 aa16.59■□□□□ 0.25
COL13A1-201ENST00000354547 SCCPDHQ8NBX0 429 aa16.59■□□□□ 0.25
COL13A1-201ENST00000354547 GPR87Q9BY21 358 aa16.59■□□□□ 0.25
COL13A1-201ENST00000354547 VSIRQ9H7M9 311 aa16.59■□□□□ 0.25
COL13A1-201ENST00000354547 ZFP92A6NM28 416 aa16.58■□□□□ 0.24
COL13A1-201ENST00000354547 AGAP20933 346 aa16.58■□□□□ 0.24
COL13A1-201ENST00000354547 CEACAM6P40199 344 aa16.58■□□□□ 0.24
COL13A1-201ENST00000354547 IL24Q13007 206 aa16.58■□□□□ 0.24
COL13A1-201ENST00000354547 FBXW9Q5XUX1 488 aa16.58■□□□□ 0.24
COL13A1-201ENST00000354547 KLRC4-KLRK1H3BQV0 150 aa16.58■□□□□ 0.24
COL13A1-201ENST00000354547 SRP19P09132 144 aaKnown RBP16.58■□□□□ 0.24
COL13A1-201ENST00000354547 ZNF429Q86V71 674 aa16.58■□□□□ 0.24
COL13A1-201ENST00000354547 BCL2L2Q92843 193 aaPredicted RBP16.58■□□□□ 0.24
COL13A1-201ENST00000354547 WSB1Q9Y6I7 421 aa16.58■□□□□ 0.24
COL13A1-201ENST00000354547 CLEC18AA5D8T8 446 aa16.57■□□□□ 0.24
COL13A1-201ENST00000354547 BAXQ07812 192 aa16.57■□□□□ 0.24
COL13A1-201ENST00000354547 ICAM4Q14773 271 aa16.57■□□□□ 0.24
COL13A1-201ENST00000354547 TESK1Q15569 626 aa16.57■□□□□ 0.24
COL13A1-201ENST00000354547 RNF212Q495C1 297 aa16.57■□□□□ 0.24
COL13A1-201ENST00000354547 CLEC18CQ8NCF0 446 aa16.57■□□□□ 0.24
COL13A1-201ENST00000354547 SPRR3Q9UBC9 169 aa16.57■□□□□ 0.24
COL13A1-201ENST00000354547 ZFHX4Q86UP3 3567 aa16.57■□□□□ 0.24
COL13A1-201ENST00000354547 PRSS44E7EML9 344 aa16.57■□□□□ 0.24
COL13A1-201ENST00000354547 J3QT63 122 aa16.57■□□□□ 0.24
COL13A1-201ENST00000354547 SCAF4O95104 1147 aaKnown RBP16.57■□□□□ 0.24
COL13A1-201ENST00000354547 ARL16Q0P5N6 197 aa16.57■□□□□ 0.24
COL13A1-201ENST00000354547 SPANXN5Q5MJ07 72 aa16.57■□□□□ 0.24
COL13A1-201ENST00000354547 NCMAPQ5T1S8 102 aa16.57■□□□□ 0.24
COL13A1-201ENST00000354547 Q6P435 159 aa16.57■□□□□ 0.24
COL13A1-201ENST00000354547 PSENENQ9NZ42 101 aa16.57■□□□□ 0.24
COL13A1-201ENST00000354547 KIAA1456Q9P272 454 aa16.57■□□□□ 0.24
COL13A1-201ENST00000354547 KLF13Q9Y2Y9 288 aaPredicted RBP16.57■□□□□ 0.24
COL13A1-201ENST00000354547 PCNX2A6NKB5 2137 aa16.57■□□□□ 0.24
COL13A1-201ENST00000354547 RP1L1Q8IWN7 2480 aaPredicted RBP16.56■□□□□ 0.24
COL13A1-201ENST00000354547 DUXBA0A1W2PPF3 345 aa16.56■□□□□ 0.24
COL13A1-201ENST00000354547 PAX6P26367 422 aa16.56■□□□□ 0.24
COL13A1-201ENST00000354547 TAS2R30P59541 319 aa16.56■□□□□ 0.24
COL13A1-201ENST00000354547 ARG2P78540 354 aa16.56■□□□□ 0.24
COL13A1-201ENST00000354547 DLK1P80370 383 aa16.56■□□□□ 0.24
COL13A1-201ENST00000354547 IGKV1-5P01602 117 aa16.56■□□□□ 0.24
COL13A1-201ENST00000354547 IGLV2-14P01704 120 aa16.56■□□□□ 0.24
COL13A1-201ENST00000354547 S100A9P06702 114 aaKnown RBP16.56■□□□□ 0.24
COL13A1-201ENST00000354547 RPS16P62249 146 aaKnown RBP16.56■□□□□ 0.24
COL13A1-201ENST00000354547 TLE4Q04727 773 aa16.56■□□□□ 0.24
COL13A1-201ENST00000354547 SCGB1C1Q8TD33 95 aa16.56■□□□□ 0.24
COL13A1-201ENST00000354547 RTL8AQ9BWD3 113 aa16.56■□□□□ 0.24
COL13A1-201ENST00000354547 COL27A1Q8IZC6 1860 aaPredicted RBP16.56■□□□□ 0.24
COL13A1-201ENST00000354547 C21orf140B9A014 251 aa16.56■□□□□ 0.24
COL13A1-201ENST00000354547 SYNGR2O43760 224 aa16.56■□□□□ 0.24
COL13A1-201ENST00000354547 TBC1D28Q2M2D7 210 aa16.56■□□□□ 0.24
COL13A1-201ENST00000354547 ZNF808Q8N4W9 903 aaPredicted RBP16.56■□□□□ 0.24
COL13A1-201ENST00000354547 TUBA4BQ9H853 241 aa16.56■□□□□ 0.24
COL13A1-201ENST00000354547 A0A1B0GU03 582 aa16.55■□□□□ 0.24
COL13A1-201ENST00000354547 PPP1CBP62140 327 aa16.55■□□□□ 0.24
COL13A1-201ENST00000354547 DBX2Q6ZNG2 339 aa16.55■□□□□ 0.24
COL13A1-201ENST00000354547 ZNF826PQ6ZT77 177 aa16.55■□□□□ 0.24
COL13A1-201ENST00000354547 RPRMQ9NS64 109 aa16.55■□□□□ 0.24
COL13A1-201ENST00000354547 TRGV5A0A0B4J1U4 118 aa16.55■□□□□ 0.24
COL13A1-201ENST00000354547 CD46P15529 392 aa16.55■□□□□ 0.24
COL13A1-201ENST00000354547 ELLP55199 621 aaPredicted RBP16.55■□□□□ 0.24
COL13A1-201ENST00000354547 RAB11AP62491 216 aa16.55■□□□□ 0.24
COL13A1-201ENST00000354547 OR8G2PQ6IF36 304 aa16.55■□□□□ 0.24
COL13A1-201ENST00000354547 LILRB2Q8N423 598 aa16.55■□□□□ 0.24
COL13A1-201ENST00000354547 ABHD14BQ96IU4 210 aa16.55■□□□□ 0.24
COL13A1-201ENST00000354547 OPA3Q9H6K4 179 aa16.55■□□□□ 0.24
COL13A1-201ENST00000354547 ZNF665Q9H7R5 613 aa16.55■□□□□ 0.24
COL13A1-201ENST00000354547 CDH20Q9HBT6 801 aa16.55■□□□□ 0.24
COL13A1-201ENST00000354547 FZR1Q9UM11 496 aa16.55■□□□□ 0.24
COL13A1-201ENST00000354547 CHD3Q12873 2000 aaKnown RBP16.55■□□□□ 0.24
COL13A1-201ENST00000354547 WISP2O76076 250 aa16.54■□□□□ 0.24
COL13A1-201ENST00000354547 CD59P13987 128 aa16.54■□□□□ 0.24
COL13A1-201ENST00000354547 CLDND2Q8NHS1 167 aa16.54■□□□□ 0.24
COL13A1-201ENST00000354547 NANOS1Q8WY41 292 aaKnown RBP16.54■□□□□ 0.24
COL13A1-201ENST00000354547 WDYHV1Q96HA8 205 aa16.54■□□□□ 0.24
COL13A1-201ENST00000354547 NIT2Q9NQR4 276 aa16.54■□□□□ 0.24
COL13A1-201ENST00000354547 TINAGQ9UJW2 476 aa16.54■□□□□ 0.24
COL13A1-201ENST00000354547 KMT2EQ8IZD2 1858 aa16.54■□□□□ 0.24
COL13A1-201ENST00000354547 KIAA1324LA8MWY0 1029 aaPredicted RBP16.54■□□□□ 0.24
COL13A1-201ENST00000354547 WNT9BO14905 357 aa16.54■□□□□ 0.24
COL13A1-201ENST00000354547 UBE2NP61088 152 aaKnown RBP16.54■□□□□ 0.24
COL13A1-201ENST00000354547 LINC00596Q86U02 117 aa16.54■□□□□ 0.24
COL13A1-201ENST00000354547 SLC25A40Q8TBP6 338 aa16.54■□□□□ 0.24
COL13A1-201ENST00000354547 IL22RA2Q969J5 263 aa16.54■□□□□ 0.24
COL13A1-201ENST00000354547 CNOT1A5YKK6 2376 aaKnown RBP16.54■□□□□ 0.24
COL13A1-201ENST00000354547 ZNF585BQ52M93 769 aa16.54■□□□□ 0.24
COL13A1-201ENST00000354547 RAB40CQ96S21 281 aa16.54■□□□□ 0.24
COL13A1-201ENST00000354547 NIPSNAP3BQ9BS92 247 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms