RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 IGKV1D-39P04432 117 aa12.33□□□□□ -0.44
TDP2-201ENST00000341060 AGAP20933 346 aa12.33□□□□□ -0.44
TDP2-201ENST00000341060 TAS2R30P59541 319 aa12.33□□□□□ -0.44
TDP2-201ENST00000341060 TGIF1Q15583 401 aa12.33□□□□□ -0.44
TDP2-201ENST00000341060 RNFT1Q5M7Z0 435 aa12.33□□□□□ -0.44
TDP2-201ENST00000341060 AKR1C8PQ5T2L2 129 aa12.33□□□□□ -0.44
TDP2-201ENST00000341060 ZNF561Q8N587 486 aa12.33□□□□□ -0.44
TDP2-201ENST00000341060 DIDO1Q9BTC0 2240 aaKnown RBP12.33□□□□□ -0.44
TDP2-201ENST00000341060 PCP4L1A6NKN8 68 aa12.32□□□□□ -0.44
TDP2-201ENST00000341060 A6NLC8 198 aa12.32□□□□□ -0.44
TDP2-201ENST00000341060 SIRPB1O00241 398 aa12.32□□□□□ -0.44
TDP2-201ENST00000341060 CNOT4O95628 575 aaKnown RBP12.32□□□□□ -0.44
TDP2-201ENST00000341060 TLE4Q04727 773 aa12.32□□□□□ -0.44
TDP2-201ENST00000341060 MRPL49Q13405 166 aaKnown RBP12.32□□□□□ -0.44
TDP2-201ENST00000341060 KRBOX4Q5JUW0 171 aa12.32□□□□□ -0.44
TDP2-201ENST00000341060 DHRS13Q6UX07 377 aa12.32□□□□□ -0.44
TDP2-201ENST00000341060 Q6ZRM9 215 aa12.32□□□□□ -0.44
TDP2-201ENST00000341060 VASH2Q86V25 355 aa12.32□□□□□ -0.44
TDP2-201ENST00000341060 RNASE11Q8TAA1 199 aaKnown RBP12.32□□□□□ -0.44
TDP2-201ENST00000341060 GMPPAQ96IJ6 420 aaPredicted RBP12.32□□□□□ -0.44
TDP2-201ENST00000341060 OR2J1Q9GZK6 312 aa12.32□□□□□ -0.44
TDP2-201ENST00000341060 ZDHHC11Q9H8X9 412 aa12.32□□□□□ -0.44
TDP2-201ENST00000341060 MBNL3Q9NUK0 354 aaKnown RBP12.32□□□□□ -0.44
TDP2-201ENST00000341060 H3BP45 60 aa12.32□□□□□ -0.44
TDP2-201ENST00000341060 CELA3BP08861 270 aa12.32□□□□□ -0.44
TDP2-201ENST00000341060 PGA5P0DJD9 388 aa12.32□□□□□ -0.44
TDP2-201ENST00000341060 RAB5AP20339 215 aa12.32□□□□□ -0.44
TDP2-201ENST00000341060 PPP1CBP62140 327 aa12.32□□□□□ -0.44
TDP2-201ENST00000341060 SNRPEP62304 92 aaKnown RBP12.32□□□□□ -0.44
TDP2-201ENST00000341060 ZNF146Q15072 292 aa12.32□□□□□ -0.44
TDP2-201ENST00000341060 ZNF766Q5HY98 468 aa12.32□□□□□ -0.44
TDP2-201ENST00000341060 HES3Q5TGS1 186 aa12.32□□□□□ -0.44
TDP2-201ENST00000341060 PRR18Q8N4B5 295 aa12.32□□□□□ -0.44
TDP2-201ENST00000341060 RBMXL1Q96E39 390 aaKnown RBP12.32□□□□□ -0.44
TDP2-201ENST00000341060 LIN7CQ9NUP9 197 aaKnown RBP12.32□□□□□ -0.44
TDP2-201ENST00000341060 TRAPPC2LQ9UL33 140 aa12.32□□□□□ -0.44
TDP2-201ENST00000341060 CNOT1A5YKK6 2376 aaKnown RBP12.31□□□□□ -0.44
TDP2-201ENST00000341060 TRAV39A0A0B4J263 110 aa12.31□□□□□ -0.44
TDP2-201ENST00000341060 C5orf52A6NGY3 159 aa12.31□□□□□ -0.44
TDP2-201ENST00000341060 P4HA3Q7Z4N8 544 aa12.31□□□□□ -0.44
TDP2-201ENST00000341060 CACNG5Q9UF02 275 aa12.31□□□□□ -0.44
TDP2-201ENST00000341060 WIPI2Q9Y4P8 454 aa12.31□□□□□ -0.44
TDP2-201ENST00000341060 PUS1Q9Y606 427 aaKnown RBP eCLIP12.31□□□□□ -0.44
TDP2-201ENST00000341060 A0A1W2PPE2 198 aa12.31□□□□□ -0.44
TDP2-201ENST00000341060 SYNGR2O43760 224 aa12.31□□□□□ -0.44
TDP2-201ENST00000341060 HBE1P02100 147 aa12.31□□□□□ -0.44
TDP2-201ENST00000341060 HSPB1P04792 205 aaKnown RBP12.31□□□□□ -0.44
TDP2-201ENST00000341060 ARG1P05089 322 aa12.31□□□□□ -0.44
TDP2-201ENST00000341060 SRP19P09132 144 aaKnown RBP12.31□□□□□ -0.44
TDP2-201ENST00000341060 MAS1LP35410 378 aa12.31□□□□□ -0.44
TDP2-201ENST00000341060 CD200P41217 278 aa12.31□□□□□ -0.44
TDP2-201ENST00000341060 MEOX2P50222 304 aa12.31□□□□□ -0.44
TDP2-201ENST00000341060 ARG2P78540 354 aa12.31□□□□□ -0.44
TDP2-201ENST00000341060 TMEM267Q0VDI3 215 aaPredicted RBP12.31□□□□□ -0.44
TDP2-201ENST00000341060 TRIP6Q15654 476 aaKnown RBP12.31□□□□□ -0.44
TDP2-201ENST00000341060 IZUMO4Q1ZYL8 232 aa12.31□□□□□ -0.44
TDP2-201ENST00000341060 EIF2S3LQ2VIR3 472 aaKnown RBP12.31□□□□□ -0.44
TDP2-201ENST00000341060 ATP1A1-AS1Q5TC04 95 aa12.31□□□□□ -0.44
TDP2-201ENST00000341060 FAM24BQ8N5W8 94 aa12.31□□□□□ -0.44
TDP2-201ENST00000341060 TMEM178AQ8NBL3 297 aa12.31□□□□□ -0.44
TDP2-201ENST00000341060 MALSU1Q96EH3 234 aa12.31□□□□□ -0.44
TDP2-201ENST00000341060 CHD3Q12873 2000 aaKnown RBP12.3□□□□□ -0.44
TDP2-201ENST00000341060 UBE2CO00762 179 aa12.3□□□□□ -0.44
TDP2-201ENST00000341060 CDIPTO14735 213 aa12.3□□□□□ -0.44
TDP2-201ENST00000341060 SCAF4O95104 1147 aaKnown RBP12.3□□□□□ -0.44
TDP2-201ENST00000341060 NXPH2O95156 264 aa12.3□□□□□ -0.44
TDP2-201ENST00000341060 IFNA5P01569 189 aa12.3□□□□□ -0.44
TDP2-201ENST00000341060 IGKV1-5P01602 117 aa12.3□□□□□ -0.44
TDP2-201ENST00000341060 S100A6P06703 90 aa12.3□□□□□ -0.44
TDP2-201ENST00000341060 RAC2P15153 192 aa12.3□□□□□ -0.44
TDP2-201ENST00000341060 RAB2AP61019 212 aa12.3□□□□□ -0.44
TDP2-201ENST00000341060 ERVS71-1P61550 626 aa12.3□□□□□ -0.44
TDP2-201ENST00000341060 RPS23P62266 143 aaKnown RBP12.3□□□□□ -0.44
TDP2-201ENST00000341060 TGFBR3Q03167 851 aa12.3□□□□□ -0.44
TDP2-201ENST00000341060 ICAM4Q14773 271 aa12.3□□□□□ -0.44
TDP2-201ENST00000341060 HAGHQ16775 308 aa12.3□□□□□ -0.44
TDP2-201ENST00000341060 ZNF506Q5JVG8 444 aa12.3□□□□□ -0.44
TDP2-201ENST00000341060 CDH20Q9HBT6 801 aa12.3□□□□□ -0.44
TDP2-201ENST00000341060 PPP1R3CQ9UQK1 317 aa12.3□□□□□ -0.44
TDP2-201ENST00000341060 RBM7Q9Y580 266 aaKnown RBP12.3□□□□□ -0.44
TDP2-201ENST00000341060 URB1O60287 2271 aaKnown RBP12.3□□□□□ -0.44
TDP2-201ENST00000341060 GVINP1Q7Z2Y8 2422 aa12.3□□□□□ -0.44
TDP2-201ENST00000341060 TRAV1-1A0A0B4J248 108 aa12.29□□□□□ -0.44
TDP2-201ENST00000341060 hCG_1809904A0A1W2PP81 198 aa12.29□□□□□ -0.44
TDP2-201ENST00000341060 A0A1W2PR64 198 aa12.29□□□□□ -0.44
TDP2-201ENST00000341060 A0A1W2PRV1 198 aa12.29□□□□□ -0.44
TDP2-201ENST00000341060 IQCF6A8MYZ5 107 aa12.29□□□□□ -0.44
TDP2-201ENST00000341060 SH2D1BO14796 132 aa12.29□□□□□ -0.44
TDP2-201ENST00000341060 EIF3GO75821 320 aaKnown RBP eCLIP12.29□□□□□ -0.44
TDP2-201ENST00000341060 IGHV1-2P23083 117 aa12.29□□□□□ -0.44
TDP2-201ENST00000341060 NBL1P41271 181 aa12.29□□□□□ -0.44
TDP2-201ENST00000341060 IDH3GP51553 393 aaPredicted RBP12.29□□□□□ -0.44
TDP2-201ENST00000341060 GABRA6Q16445 453 aa12.29□□□□□ -0.44
TDP2-201ENST00000341060 ZNF585BQ52M93 769 aa12.29□□□□□ -0.44
TDP2-201ENST00000341060 DEFB124Q8NES8 71 aa12.29□□□□□ -0.44
TDP2-201ENST00000341060 CLDND2Q8NHS1 167 aa12.29□□□□□ -0.44
TDP2-201ENST00000341060 KCNS2Q9ULS6 477 aa12.29□□□□□ -0.44
TDP2-201ENST00000341060 USF3Q68DE3 2245 aa12.29□□□□□ -0.44
TDP2-201ENST00000341060 H3BQ15 152 aa12.29□□□□□ -0.44
TDP2-201ENST00000341060 WDR1O75083 606 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms