RNA–Protein interactions for RNA: ENST00000340840.6

TRERF1-201, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-201ENST00000340840 HIST1H2BMQ99879 126 aa8.11□□□□□ -1.11
TRERF1-201ENST00000340840 RPRMQ9NS64 109 aa8.11□□□□□ -1.11
TRERF1-201ENST00000340840 PROB1E7EW31 1015 aa8.11□□□□□ -1.11
TRERF1-201ENST00000340840 CYTIPO60759 359 aa8.11□□□□□ -1.11
TRERF1-201ENST00000340840 PYY3Q5JQD4 70 aa8.11□□□□□ -1.11
TRERF1-201ENST00000340840 ZNF880Q6PDB4 577 aa8.11□□□□□ -1.11
TRERF1-201ENST00000340840 CALHM1Q8IU99 346 aa8.11□□□□□ -1.11
TRERF1-201ENST00000340840 OR10P1Q8NGE3 313 aa8.11□□□□□ -1.11
TRERF1-201ENST00000340840 GPR146Q96CH1 333 aa8.11□□□□□ -1.11
TRERF1-201ENST00000340840 FOXD3Q9UJU5 478 aaPredicted RBP8.11□□□□□ -1.11
TRERF1-201ENST00000340840 NCOA6Q14686 2063 aaPredicted RBP8.1□□□□□ -1.11
TRERF1-201ENST00000340840 CHD7Q9P2D1 2997 aa8.1□□□□□ -1.11
TRERF1-201ENST00000340840 XKRY2A2RUG3 117 aa8.1□□□□□ -1.11
TRERF1-201ENST00000340840 ZIC3O60481 467 aa8.1□□□□□ -1.11
TRERF1-201ENST00000340840 IGHV2-70P01814 119 aa8.1□□□□□ -1.11
TRERF1-201ENST00000340840 PSG2P11465 335 aa8.1□□□□□ -1.11
TRERF1-201ENST00000340840 HIST1H1BP16401 226 aaKnown RBP8.1□□□□□ -1.11
TRERF1-201ENST00000340840 DDTP30046 118 aa8.1□□□□□ -1.11
TRERF1-201ENST00000340840 GALR1P47211 349 aa8.1□□□□□ -1.11
TRERF1-201ENST00000340840 CLN3Q13286 438 aa8.1□□□□□ -1.11
TRERF1-201ENST00000340840 CLEC12BQ2HXU8 276 aa8.1□□□□□ -1.11
TRERF1-201ENST00000340840 TMEM41BQ5BJD5 291 aa8.1□□□□□ -1.11
TRERF1-201ENST00000340840 CST9LP1Q5W188 147 aa8.1□□□□□ -1.11
TRERF1-201ENST00000340840 SAXO1Q8IYX7 474 aa8.1□□□□□ -1.11
TRERF1-201ENST00000340840 OR2Y1Q8NGV0 311 aa8.1□□□□□ -1.11
TRERF1-201ENST00000340840 LOXL4Q96JB6 756 aa8.1□□□□□ -1.11
TRERF1-201ENST00000340840 GLRX2Q9NS18 164 aa8.1□□□□□ -1.11
TRERF1-201ENST00000340840 ZNF581Q9P0T4 197 aa8.1□□□□□ -1.11
TRERF1-201ENST00000340840 TINAGQ9UJW2 476 aa8.1□□□□□ -1.11
TRERF1-201ENST00000340840 C19orf67A6NJJ6 358 aa8.1□□□□□ -1.11
TRERF1-201ENST00000340840 OR5B21A6NL26 309 aa8.1□□□□□ -1.11
TRERF1-201ENST00000340840 NXPH2O95156 264 aa8.1□□□□□ -1.11
TRERF1-201ENST00000340840 PGA5P0DJD9 388 aa8.1□□□□□ -1.11
TRERF1-201ENST00000340840 ACOT6Q3I5F7 207 aaPredicted RBP8.1□□□□□ -1.11
TRERF1-201ENST00000340840 SPSB3Q6PJ21 355 aa8.1□□□□□ -1.11
TRERF1-201ENST00000340840 ASCL4Q6XD76 172 aa8.1□□□□□ -1.11
TRERF1-201ENST00000340840 OR5A2Q8NGI9 324 aa8.1□□□□□ -1.11
TRERF1-201ENST00000340840 TMEM171Q8WVE6 324 aa8.1□□□□□ -1.11
TRERF1-201ENST00000340840 DNASE2BQ8WZ79 361 aa8.1□□□□□ -1.11
TRERF1-201ENST00000340840 MEGF10Q96KG7 1140 aa8.1□□□□□ -1.11
TRERF1-201ENST00000340840 CDH20Q9HBT6 801 aa8.1□□□□□ -1.11
TRERF1-201ENST00000340840 POLDIP2Q9Y2S7 368 aa8.1□□□□□ -1.11
TRERF1-201ENST00000340840 A0A1W2PQM1 296 aa8.1□□□□□ -1.11
TRERF1-201ENST00000340840 ZNF705FA8MVS1 300 aaPredicted RBP8.1□□□□□ -1.11
TRERF1-201ENST00000340840 SIRPB1O00241 398 aa8.1□□□□□ -1.11
TRERF1-201ENST00000340840 SCGB1D1O95968 90 aa8.1□□□□□ -1.11
TRERF1-201ENST00000340840 CXCL1P09341 107 aa8.1□□□□□ -1.11
TRERF1-201ENST00000340840 ZNF705DP0CH99 300 aaPredicted RBP8.1□□□□□ -1.11
TRERF1-201ENST00000340840 ZNF705BP0CI00 300 aaPredicted RBP8.1□□□□□ -1.11
TRERF1-201ENST00000340840 MLF1P58340 268 aa8.1□□□□□ -1.11
TRERF1-201ENST00000340840 SPNS3Q6ZMD2 512 aa8.1□□□□□ -1.11
TRERF1-201ENST00000340840 ZIC4Q8N9L1 334 aa8.1□□□□□ -1.11
TRERF1-201ENST00000340840 RTL8AQ9BWD3 113 aa8.1□□□□□ -1.11
TRERF1-201ENST00000340840 PRDM14Q9GZV8 571 aa8.1□□□□□ -1.11
TRERF1-201ENST00000340840 IGHV1-45A0A0A0MS14 117 aa8.09□□□□□ -1.11
TRERF1-201ENST00000340840 GAMTQ14353 236 aa8.09□□□□□ -1.11
TRERF1-201ENST00000340840 CEACAM21Q3KPI0 293 aa8.09□□□□□ -1.11
TRERF1-201ENST00000340840 LINC00596Q86U02 117 aa8.09□□□□□ -1.11
TRERF1-201ENST00000340840 ABHD3Q8WU67 409 aa8.09□□□□□ -1.11
TRERF1-201ENST00000340840 TMEM37Q8WXS4 190 aa8.09□□□□□ -1.11
TRERF1-201ENST00000340840 PSMG3Q9BT73 122 aaPredicted RBP8.09□□□□□ -1.11
TRERF1-201ENST00000340840 ZDHHC8Q9ULC8 765 aa8.09□□□□□ -1.11
TRERF1-201ENST00000340840 RFNGQ9Y644 331 aa8.09□□□□□ -1.11
TRERF1-201ENST00000340840 NOTCH2Q04721 2471 aa8.09□□□□□ -1.11
TRERF1-201ENST00000340840 TNFSF15O95150 251 aa8.09□□□□□ -1.11
TRERF1-201ENST00000340840 CCL2P13500 99 aa8.09□□□□□ -1.11
TRERF1-201ENST00000340840 CEACAM1P13688 526 aa8.09□□□□□ -1.11
TRERF1-201ENST00000340840 ANOS1P23352 680 aa8.09□□□□□ -1.11
TRERF1-201ENST00000340840 NUBP1P53384 320 aa8.09□□□□□ -1.11
TRERF1-201ENST00000340840 ERVFRD-1P60508 538 aa8.09□□□□□ -1.11
TRERF1-201ENST00000340840 RSPO1Q2MKA7 263 aaPredicted RBP8.09□□□□□ -1.11
TRERF1-201ENST00000340840 TMEM42Q69YG0 159 aa8.09□□□□□ -1.11
TRERF1-201ENST00000340840 OR10G4Q8NGN3 311 aa8.09□□□□□ -1.11
TRERF1-201ENST00000340840 RHOVQ96L33 236 aa8.09□□□□□ -1.11
TRERF1-201ENST00000340840 CIB3Q96Q77 187 aaPredicted RBP8.09□□□□□ -1.11
TRERF1-201ENST00000340840 MPC1Q9Y5U8 109 aa8.09□□□□□ -1.11
TRERF1-201ENST00000340840 NUP210LQ5VU65 1888 aa8.09□□□□□ -1.11
TRERF1-201ENST00000340840 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.09□□□□□ -1.11
TRERF1-201ENST00000340840 MDKP21741 143 aaPredicted RBP8.09□□□□□ -1.11
TRERF1-201ENST00000340840 HOXC12P31275 282 aa8.09□□□□□ -1.11
TRERF1-201ENST00000340840 REC114Q7Z4M0 266 aa8.09□□□□□ -1.11
TRERF1-201ENST00000340840 RNF138Q8WVD3 245 aa8.09□□□□□ -1.11
TRERF1-201ENST00000340840 HPSE2Q8WWQ2 592 aa8.09□□□□□ -1.11
TRERF1-201ENST00000340840 SLC25A22Q9H936 323 aa8.09□□□□□ -1.11
TRERF1-201ENST00000340840 TMEM131Q92545 1883 aa8.09□□□□□ -1.11
TRERF1-201ENST00000340840 UBE2NP61088 152 aaKnown RBP8.08□□□□□ -1.12
TRERF1-201ENST00000340840 PMP22Q01453 160 aa8.08□□□□□ -1.12
TRERF1-201ENST00000340840 MEF2BQ02080 365 aaPredicted RBP8.08□□□□□ -1.12
TRERF1-201ENST00000340840 ATP6V1FQ16864 119 aa8.08□□□□□ -1.12
TRERF1-201ENST00000340840 RCC1LQ96I51 464 aaKnown RBP8.08□□□□□ -1.12
TRERF1-201ENST00000340840 AKIRIN1Q9H9L7 192 aaPredicted RBP8.08□□□□□ -1.12
TRERF1-201ENST00000340840 HS3ST3B1Q9Y662 390 aa8.08□□□□□ -1.12
TRERF1-201ENST00000340840 TRAV1-1A0A0B4J248 108 aa8.08□□□□□ -1.12
TRERF1-201ENST00000340840 IGKV1D-13A0A0B4J2D9 117 aa8.08□□□□□ -1.12
TRERF1-201ENST00000340840 HMGB3O15347 200 aaKnown RBP8.08□□□□□ -1.12
TRERF1-201ENST00000340840 IGKV1-13P0DP09 117 aa8.08□□□□□ -1.12
TRERF1-201ENST00000340840 ERVS71-1P61550 626 aa8.08□□□□□ -1.12
TRERF1-201ENST00000340840 NMSQ5H8A3 153 aa8.08□□□□□ -1.12
TRERF1-201ENST00000340840 HES3Q5TGS1 186 aa8.08□□□□□ -1.12
TRERF1-201ENST00000340840 MRPL14Q6P1L8 145 aaKnown RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms