RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 C17orf58Q2M2W7 97 aa5.08□□□□□ -1.6
SMG1-201ENST00000330588 PAN3Q58A45 887 aaKnown RBP5.08□□□□□ -1.6
SMG1-201ENST00000330588 DDI2Q5TDH0 399 aa5.08□□□□□ -1.6
SMG1-201ENST00000330588 RSBN1Q5VWQ0 802 aaPredicted RBP5.08□□□□□ -1.6
SMG1-201ENST00000330588 LAIR2Q6ISS4 152 aa5.08□□□□□ -1.6
SMG1-201ENST00000330588 TRAT1Q6PIZ9 186 aa5.08□□□□□ -1.6
SMG1-201ENST00000330588 LHFPL4Q7Z7J7 247 aa5.08□□□□□ -1.6
SMG1-201ENST00000330588 TRAPPC6BQ86SZ2 158 aa5.08□□□□□ -1.6
SMG1-201ENST00000330588 LYPD6Q86Y78 171 aa5.08□□□□□ -1.6
SMG1-201ENST00000330588 DYNAPQ8N1N2 210 aa5.08□□□□□ -1.6
SMG1-201ENST00000330588 GAPTQ8N292 157 aa5.08□□□□□ -1.6
SMG1-201ENST00000330588 ABHD12Q8N2K0 398 aa5.08□□□□□ -1.6
SMG1-201ENST00000330588 OSR2Q8N2R0 312 aa5.08□□□□□ -1.6
SMG1-201ENST00000330588 MS4A15Q8N5U1 240 aa5.08□□□□□ -1.6
SMG1-201ENST00000330588 NANOGP1Q8N7R0 232 aa5.08□□□□□ -1.6
SMG1-201ENST00000330588 OR9G1Q8NH87 305 aa5.08□□□□□ -1.6
SMG1-201ENST00000330588 PHYHIPQ92561 330 aa5.08□□□□□ -1.6
SMG1-201ENST00000330588 GHSRQ92847 366 aa5.08□□□□□ -1.6
SMG1-201ENST00000330588 RFT1Q96AA3 541 aa5.08□□□□□ -1.6
SMG1-201ENST00000330588 SPACA5Q96QH8 159 aa5.08□□□□□ -1.6
SMG1-201ENST00000330588 S100A13Q99584 98 aa5.08□□□□□ -1.6
SMG1-201ENST00000330588 CITED2Q99967 270 aaPredicted RBP5.08□□□□□ -1.6
SMG1-201ENST00000330588 PRSS22Q9GZN4 317 aa5.08□□□□□ -1.6
SMG1-201ENST00000330588 ZNF702PQ9H963 129 aa5.08□□□□□ -1.6
SMG1-201ENST00000330588 ISYNA1Q9NPH2 558 aa5.08□□□□□ -1.6
SMG1-201ENST00000330588 TAS2R4Q9NYW5 299 aa5.08□□□□□ -1.6
SMG1-201ENST00000330588 RCC2Q9P258 522 aaKnown RBP5.08□□□□□ -1.6
SMG1-201ENST00000330588 ERGIC3Q9Y282 383 aa5.08□□□□□ -1.6
SMG1-201ENST00000330588 SIRT4Q9Y6E7 314 aaPredicted RBP5.08□□□□□ -1.6
SMG1-201ENST00000330588 TRAV24A0A0B4J272 114 aa5.08□□□□□ -1.6
SMG1-201ENST00000330588 A0A1B0GVG6 124 aa5.08□□□□□ -1.6
SMG1-201ENST00000330588 PGPEP1LA6NFU8 196 aa5.08□□□□□ -1.6
SMG1-201ENST00000330588 FAM90A9PA6NNJ1 464 aa5.08□□□□□ -1.6
SMG1-201ENST00000330588 BUB1B-PAK6H3BSN5 160 aa5.08□□□□□ -1.6
SMG1-201ENST00000330588 F2RL2O00254 374 aa5.08□□□□□ -1.6
SMG1-201ENST00000330588 MYL12BO14950 172 aa5.08□□□□□ -1.6
SMG1-201ENST00000330588 CHST1O43916 411 aa5.08□□□□□ -1.6
SMG1-201ENST00000330588 SC5DO75845 299 aa5.08□□□□□ -1.6
SMG1-201ENST00000330588 OR2F2O95006 317 aa5.08□□□□□ -1.6
SMG1-201ENST00000330588 CLIC3O95833 236 aa5.08□□□□□ -1.6
SMG1-201ENST00000330588 LALBAP00709 142 aa5.08□□□□□ -1.6
SMG1-201ENST00000330588 CDK1P06493 297 aa5.08□□□□□ -1.6
SMG1-201ENST00000330588 UBBP0CG47 229 aa5.08□□□□□ -1.6
SMG1-201ENST00000330588 PTBP1P26599 531 aaKnown RBP eCLIP5.08□□□□□ -1.6
SMG1-201ENST00000330588 DUSP1P28562 367 aa5.08□□□□□ -1.6
SMG1-201ENST00000330588 SOX2P48431 317 aa5.08□□□□□ -1.6
SMG1-201ENST00000330588 RAB7AP51149 207 aa5.08□□□□□ -1.6
SMG1-201ENST00000330588 KRTAP10-3P60369 221 aa5.08□□□□□ -1.6
SMG1-201ENST00000330588 AESQ08117 197 aa5.08□□□□□ -1.6
SMG1-201ENST00000330588 RBM39Q14498 530 aaKnown RBP5.08□□□□□ -1.6
SMG1-201ENST00000330588 HABP2Q14520 560 aaPredicted RBP5.08□□□□□ -1.6
SMG1-201ENST00000330588 FAM189A2Q15884 450 aa5.08□□□□□ -1.6
SMG1-201ENST00000330588 SSX2Q16385 188 aa5.08□□□□□ -1.6
SMG1-201ENST00000330588 LRRC36Q1X8D7 754 aa5.08□□□□□ -1.6
SMG1-201ENST00000330588 RNF151Q2KHN1 245 aa5.08□□□□□ -1.6
SMG1-201ENST00000330588 C2orf76Q3KRA6 126 aa5.08□□□□□ -1.6
SMG1-201ENST00000330588 LDLRAD2Q5SZI1 272 aa5.08□□□□□ -1.6
SMG1-201ENST00000330588 UNQ9370/PRO34162Q6UXP9 181 aa5.08□□□□□ -1.6
SMG1-201ENST00000330588 Q6ZTK2 550 aa5.08□□□□□ -1.6
SMG1-201ENST00000330588 RNF144BQ7Z419 303 aa5.08□□□□□ -1.6
SMG1-201ENST00000330588 CLVS1Q8IUQ0 354 aaPredicted RBP5.08□□□□□ -1.6
SMG1-201ENST00000330588 BATF2Q8N1L9 274 aa5.08□□□□□ -1.6
SMG1-201ENST00000330588 STX19Q8N4C7 294 aa5.08□□□□□ -1.6
SMG1-201ENST00000330588 LINC00311Q8N616 119 aa5.08□□□□□ -1.6
SMG1-201ENST00000330588 TPRX1Q8N7U7 411 aa5.08□□□□□ -1.6
SMG1-201ENST00000330588 SLC24A4Q8NFF2 622 aa5.08□□□□□ -1.6
SMG1-201ENST00000330588 OR5D18Q8NGL1 313 aa5.08□□□□□ -1.6
SMG1-201ENST00000330588 NDNFQ8TB73 568 aa5.08□□□□□ -1.6
SMG1-201ENST00000330588 MYDGFQ969H8 173 aa5.08□□□□□ -1.6
SMG1-201ENST00000330588 WWC2-AS2Q96NR7 200 aa5.08□□□□□ -1.6
SMG1-201ENST00000330588 DERL3Q96Q80 235 aa5.08□□□□□ -1.6
SMG1-201ENST00000330588 ZNF184Q99676 751 aaPredicted RBP5.08□□□□□ -1.6
SMG1-201ENST00000330588 SPXQ9BT56 116 aa5.08□□□□□ -1.6
SMG1-201ENST00000330588 DPCDQ9BVM2 203 aaPredicted RBP5.08□□□□□ -1.6
SMG1-201ENST00000330588 MND1Q9BWT6 205 aa5.08□□□□□ -1.6
SMG1-201ENST00000330588 C6orf62Q9GZU0 229 aaPredicted RBP5.08□□□□□ -1.6
SMG1-201ENST00000330588 MMP28Q9H239 520 aa5.08□□□□□ -1.6
SMG1-201ENST00000330588 SERTAD4Q9NUC0 356 aa5.08□□□□□ -1.6
SMG1-201ENST00000330588 CALYQ9NYX4 217 aa5.08□□□□□ -1.6
SMG1-201ENST00000330588 IDI2-AS1Q9NZ38 188 aa5.08□□□□□ -1.6
SMG1-201ENST00000330588 ST3GAL6Q9Y274 331 aa5.08□□□□□ -1.6
SMG1-201ENST00000330588 MEIKINA0A087WXM9 373 aa5.07□□□□□ -1.6
SMG1-201ENST00000330588 TMEM30CPA0ZSE6 113 aa5.07□□□□□ -1.6
SMG1-201ENST00000330588 TOR1AO14656 332 aa5.07□□□□□ -1.6
SMG1-201ENST00000330588 MMP23AO75900 390 aa5.07□□□□□ -1.6
SMG1-201ENST00000330588 CRYZL1O95825 349 aa5.07□□□□□ -1.6
SMG1-201ENST00000330588 GNAO1P09471 354 aa5.07□□□□□ -1.6
SMG1-201ENST00000330588 PSMA1P25786 263 aaKnown RBP5.07□□□□□ -1.6
SMG1-201ENST00000330588 MNDAP41218 407 aa5.07□□□□□ -1.6
SMG1-201ENST00000330588 OR3A4PP47883 348 aa5.07□□□□□ -1.6
SMG1-201ENST00000330588 PRB3Q04118 309 aaPredicted RBP5.07□□□□□ -1.6
SMG1-201ENST00000330588 ZNF816Q0VGE8 651 aaPredicted RBP5.07□□□□□ -1.6
SMG1-201ENST00000330588 TRAM1Q15629 374 aa5.07□□□□□ -1.6
SMG1-201ENST00000330588 LY6G6FQ5SQ64 297 aa5.07□□□□□ -1.6
SMG1-201ENST00000330588 C6orf141Q5SZD1 244 aa5.07□□□□□ -1.6
SMG1-201ENST00000330588 TPTE2P1Q5T6R2 138 aa5.07□□□□□ -1.6
SMG1-201ENST00000330588 PRAMEF5Q5TYX0 476 aa5.07□□□□□ -1.6
SMG1-201ENST00000330588 AHSA2Q719I0 299 aa5.07□□□□□ -1.6
SMG1-201ENST00000330588 SATL1Q86VE3 508 aa5.07□□□□□ -1.6
SMG1-201ENST00000330588 NDUFA11Q86Y39 141 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms