RNA–Protein interactions for RNA: ENST00000324932.11

NUP98-201, Transcript of nucleoporin 98, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP98, Length 6,973 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-201ENST00000324932 WDR25Q64LD2 544 aaPredicted RBP12.74□□□□□ -0.37
NUP98-201ENST00000324932 MAP1BP46821 2468 aaKnown RBP12.74□□□□□ -0.37
NUP98-201ENST00000324932 C5P01031 1676 aa12.74□□□□□ -0.37
NUP98-201ENST00000324932 AMY1AP04745 511 aa12.74□□□□□ -0.37
NUP98-201ENST00000324932 STAG3L3P0CL85 134 aa12.74□□□□□ -0.37
NUP98-201ENST00000324932 AQP10Q96PS8 301 aa12.74□□□□□ -0.37
NUP98-201ENST00000324932 RASL10BQ96S79 203 aa12.74□□□□□ -0.37
NUP98-201ENST00000324932 ARRDC1-AS1Q9H2J1 176 aa12.74□□□□□ -0.37
NUP98-201ENST00000324932 CKS2P33552 79 aa12.74□□□□□ -0.37
NUP98-201ENST00000324932 EMP1P54849 157 aa12.74□□□□□ -0.37
NUP98-201ENST00000324932 SLC35B1P78383 322 aa12.74□□□□□ -0.37
NUP98-201ENST00000324932 GUCD1Q96NT3 240 aa12.74□□□□□ -0.37
NUP98-201ENST00000324932 TLNRD1Q9H1K6 362 aa12.74□□□□□ -0.37
NUP98-201ENST00000324932 GPR35Q9HC97 309 aa12.74□□□□□ -0.37
NUP98-201ENST00000324932 HLA-DQB1P01920 261 aa12.74□□□□□ -0.37
NUP98-201ENST00000324932 CD3EP07766 207 aa12.74□□□□□ -0.37
NUP98-201ENST00000324932 NPBWR2P48146 333 aa12.74□□□□□ -0.37
NUP98-201ENST00000324932 C19orf54Q5BKX5 351 aa12.74□□□□□ -0.37
NUP98-201ENST00000324932 TMEM222Q9H0R3 208 aa12.74□□□□□ -0.37
NUP98-201ENST00000324932 PHLPP1O60346 1717 aa12.74□□□□□ -0.37
NUP98-201ENST00000324932 KCNAB3O43448 404 aa12.74□□□□□ -0.37
NUP98-201ENST00000324932 EIF3GO75821 320 aaKnown RBP eCLIP12.74□□□□□ -0.37
NUP98-201ENST00000324932 BHLHA15Q7RTS1 189 aaPredicted RBP12.74□□□□□ -0.37
NUP98-201ENST00000324932 A0A1B0GV72 72 aa12.73□□□□□ -0.37
NUP98-201ENST00000324932 NPIPB6E9PJ23 425 aa12.73□□□□□ -0.37
NUP98-201ENST00000324932 KLK2P20151 261 aa12.73□□□□□ -0.37
NUP98-201ENST00000324932 SOSTQ9BQB4 213 aa12.73□□□□□ -0.37
NUP98-201ENST00000324932 H7C2G1 150 aa12.73□□□□□ -0.37
NUP98-201ENST00000324932 CISD3P0C7P0 127 aa12.73□□□□□ -0.37
NUP98-201ENST00000324932 TAS2R60P59551 318 aa12.73□□□□□ -0.37
NUP98-201ENST00000324932 COPS9Q8WXC6 57 aa12.73□□□□□ -0.37
NUP98-201ENST00000324932 CISD1Q9NZ45 108 aaKnown RBP12.73□□□□□ -0.37
NUP98-201ENST00000324932 MRPS18BQ9Y676 258 aaKnown RBP12.73□□□□□ -0.37
NUP98-201ENST00000324932 C4AP0C0L4 1744 aa12.73□□□□□ -0.37
NUP98-201ENST00000324932 C4BP0C0L5 1744 aa12.73□□□□□ -0.37
NUP98-201ENST00000324932 BHLHA9Q7RTU4 235 aa12.73□□□□□ -0.37
NUP98-201ENST00000324932 CBLN4Q9NTU7 201 aa12.73□□□□□ -0.37
NUP98-201ENST00000324932 N4BP2Q86UW6 1770 aaPredicted RBP12.73□□□□□ -0.37
NUP98-201ENST00000324932 TGIF2-C20orf24A0A0A6YYL0 155 aa12.73□□□□□ -0.37
NUP98-201ENST00000324932 PTP4A3O75365 173 aa12.73□□□□□ -0.37
NUP98-201ENST00000324932 CHRNA10Q9GZZ6 450 aa12.73□□□□□ -0.37
NUP98-201ENST00000324932 HSPB7Q9UBY9 170 aa12.73□□□□□ -0.37
NUP98-201ENST00000324932 H0YL77 283 aa12.73□□□□□ -0.37
NUP98-201ENST00000324932 TMEM136Q6ZRR5 245 aa12.73□□□□□ -0.37
NUP98-201ENST00000324932 RABAC1Q9UI14 185 aa12.73□□□□□ -0.37
NUP98-201ENST00000324932 AKIRIN1Q9H9L7 192 aaPredicted RBP12.72□□□□□ -0.37
NUP98-201ENST00000324932 NTN1O95631 604 aa12.72□□□□□ -0.37
NUP98-201ENST00000324932 GZMMP51124 257 aa12.72□□□□□ -0.37
NUP98-201ENST00000324932 Q6ZS52 159 aa12.72□□□□□ -0.37
NUP98-201ENST00000324932 HDHD3Q9BSH5 251 aaPredicted RBP12.72□□□□□ -0.37
NUP98-201ENST00000324932 KCNK7Q9Y2U2 307 aa12.72□□□□□ -0.37
NUP98-201ENST00000324932 TRBV9A0A0B4J1U6 114 aa12.72□□□□□ -0.37
NUP98-201ENST00000324932 RBFOX2O43251 390 aaKnown RBP eCLIP12.72□□□□□ -0.37
NUP98-201ENST00000324932 C1QL1O75973 258 aa12.72□□□□□ -0.37
NUP98-201ENST00000324932 HTN1P15515 57 aa12.72□□□□□ -0.37
NUP98-201ENST00000324932 LIMS2Q7Z4I7 341 aa12.72□□□□□ -0.37
NUP98-201ENST00000324932 CALHM1Q8IU99 346 aa12.72□□□□□ -0.37
NUP98-201ENST00000324932 A0A1W2PRD5 423 aa12.72□□□□□ -0.37
NUP98-201ENST00000324932 A0A1W2PRF3 423 aa12.72□□□□□ -0.37
NUP98-201ENST00000324932 A0A1W2PRM7 423 aa12.72□□□□□ -0.37
NUP98-201ENST00000324932 PQLC2LA1A4F0 135 aa12.72□□□□□ -0.37
NUP98-201ENST00000324932 HOXD4P09016 255 aaPredicted RBP12.72□□□□□ -0.37
NUP98-201ENST00000324932 AGAP20933 346 aa12.72□□□□□ -0.37
NUP98-201ENST00000324932 MARS2Q96GW9 593 aaKnown RBP12.72□□□□□ -0.37
NUP98-201ENST00000324932 HKR1P10072 659 aa12.72□□□□□ -0.37
NUP98-201ENST00000324932 NANOS3P60323 173 aaKnown RBP12.72□□□□□ -0.37
NUP98-201ENST00000324932 KCNMB1Q16558 191 aa12.72□□□□□ -0.37
NUP98-201ENST00000324932 TEX30Q5JUR7 227 aa12.72□□□□□ -0.37
NUP98-201ENST00000324932 TMEM78Q5T7P6 136 aa12.72□□□□□ -0.37
NUP98-201ENST00000324932 TAF15Q92804 592 aaKnown RBP eCLIP12.72□□□□□ -0.37
NUP98-201ENST00000324932 FAM60AQ9NP50 221 aa12.72□□□□□ -0.37
NUP98-201ENST00000324932 DSPPQ9NZW4 1301 aa12.72□□□□□ -0.37
NUP98-201ENST00000324932 TRAV39A0A0B4J263 110 aa12.72□□□□□ -0.37
NUP98-201ENST00000324932 PPP1CCP36873 323 aaKnown RBP12.72□□□□□ -0.37
NUP98-201ENST00000324932 KCNE5Q9UJ90 142 aa12.72□□□□□ -0.37
NUP98-201ENST00000324932 SIRT4Q9Y6E7 314 aaPredicted RBP12.72□□□□□ -0.37
NUP98-201ENST00000324932 FAM216AQ8WUB2 273 aa12.71□□□□□ -0.37
NUP98-201ENST00000324932 MAP1LC3AQ9H492 121 aa12.71□□□□□ -0.37
NUP98-201ENST00000324932 ERVFRD-1P60508 538 aa12.71□□□□□ -0.37
NUP98-201ENST00000324932 RPS20P60866 119 aaKnown RBP12.71□□□□□ -0.37
NUP98-201ENST00000324932 MMDQ15546 238 aa12.71□□□□□ -0.37
NUP98-201ENST00000324932 HES3Q5TGS1 186 aa12.71□□□□□ -0.37
NUP98-201ENST00000324932 CCDC144NLQ6NUI1 221 aa12.71□□□□□ -0.37
NUP98-201ENST00000324932 HIST1H2BAQ96A08 127 aa12.71□□□□□ -0.37
NUP98-201ENST00000324932 C2CD4DB7Z1M9 353 aa12.71□□□□□ -0.37
NUP98-201ENST00000324932 CDK2AP1O14519 115 aa12.71□□□□□ -0.37
NUP98-201ENST00000324932 METTL1Q9UBP6 276 aaKnown RBP12.71□□□□□ -0.37
NUP98-201ENST00000324932 OR10AG1Q8NH19 301 aa12.71□□□□□ -0.38
NUP98-201ENST00000324932 GAB4Q2WGN9 574 aa12.71□□□□□ -0.38
NUP98-201ENST00000324932 INO80CQ6PI98 192 aaPredicted RBP12.71□□□□□ -0.38
NUP98-201ENST00000324932 OR2Y1Q8NGV0 311 aa12.71□□□□□ -0.38
NUP98-201ENST00000324932 GPA33Q99795 319 aa12.71□□□□□ -0.38
NUP98-201ENST00000324932 PEF1Q9UBV8 284 aaKnown RBP12.71□□□□□ -0.38
NUP98-201ENST00000324932 MYO9BQ13459 2157 aa12.7□□□□□ -0.38
NUP98-201ENST00000324932 A0A1B0GV90 55 aa12.7□□□□□ -0.38
NUP98-201ENST00000324932 FAM90A26D6RGX4 464 aa12.7□□□□□ -0.38
NUP98-201ENST00000324932 NPIPB9F8W1W9 429 aa12.7□□□□□ -0.38
NUP98-201ENST00000324932 P2RY4P51582 365 aa12.7□□□□□ -0.38
NUP98-201ENST00000324932 JOSD1Q15040 202 aaPredicted RBP12.7□□□□□ -0.38
NUP98-201ENST00000324932 PARLQ9H300 379 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms