RNA–Protein interactions for RNA: ENST00000317840.9

COL3A1-202, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2 BASIC

Gene COL3A1, Length 3,873 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-202ENST00000317840 FAM58AQ8N1B3 248 aa9□□□□□ -0.97
COL3A1-202ENST00000317840 ZNF808Q8N4W9 903 aaPredicted RBP9□□□□□ -0.97
COL3A1-202ENST00000317840 GPR146Q96CH1 333 aa9□□□□□ -0.97
COL3A1-202ENST00000317840 MUCL1Q96DR8 90 aa9□□□□□ -0.97
COL3A1-202ENST00000317840 RAB40CQ96S21 281 aa9□□□□□ -0.97
COL3A1-202ENST00000317840 ZNF552Q9H707 407 aaPredicted RBP9□□□□□ -0.97
COL3A1-202ENST00000317840 ATP23Q9Y6H3 246 aa9□□□□□ -0.97
COL3A1-202ENST00000317840 DNPH1O43598 174 aa9□□□□□ -0.97
COL3A1-202ENST00000317840 TMEM50AO95807 157 aa9□□□□□ -0.97
COL3A1-202ENST00000317840 HSPB1P04792 205 aaKnown RBP9□□□□□ -0.97
COL3A1-202ENST00000317840 CDX1P47902 265 aaPredicted RBP9□□□□□ -0.97
COL3A1-202ENST00000317840 MEOX1P50221 254 aa9□□□□□ -0.97
COL3A1-202ENST00000317840 MYPOPQ86VE0 399 aaPredicted RBP9□□□□□ -0.97
COL3A1-202ENST00000317840 ZPBPQ9BS86 351 aa9□□□□□ -0.97
COL3A1-202ENST00000317840 MTCH1Q9NZJ7 389 aa9□□□□□ -0.97
COL3A1-202ENST00000317840 OR2W1Q9Y3N9 320 aa9□□□□□ -0.97
COL3A1-202ENST00000317840 NXPH2O95156 264 aa9□□□□□ -0.97
COL3A1-202ENST00000317840 ERVFRD-1P60508 538 aa9□□□□□ -0.97
COL3A1-202ENST00000317840 KHDC3LQ587J8 217 aa9□□□□□ -0.97
COL3A1-202ENST00000317840 ZNF573Q86YE8 665 aa9□□□□□ -0.97
COL3A1-202ENST00000317840 KDF1Q8NAX2 398 aaPredicted RBP9□□□□□ -0.97
COL3A1-202ENST00000317840 NINJ1Q92982 152 aa9□□□□□ -0.97
COL3A1-202ENST00000317840 ADGRG7Q96K78 797 aa9□□□□□ -0.97
COL3A1-202ENST00000317840 PROK2Q9HC23 129 aa9□□□□□ -0.97
COL3A1-202ENST00000317840 CLEC18AA5D8T8 446 aa8.99□□□□□ -0.97
COL3A1-202ENST00000317840 MAP1LC3B2A6NCE7 125 aa8.99□□□□□ -0.97
COL3A1-202ENST00000317840 SEC14L6B5MCN3 397 aa8.99□□□□□ -0.97
COL3A1-202ENST00000317840 C9orf172C9J069 976 aa8.99□□□□□ -0.97
COL3A1-202ENST00000317840 TSTD3H0UI37 97 aa8.99□□□□□ -0.97
COL3A1-202ENST00000317840 GRPP07492 148 aa8.99□□□□□ -0.97
COL3A1-202ENST00000317840 ZFP36L1Q07352 338 aaKnown RBP8.99□□□□□ -0.97
COL3A1-202ENST00000317840 ICAM4Q14773 271 aa8.99□□□□□ -0.97
COL3A1-202ENST00000317840 IGFBP7Q16270 282 aa8.99□□□□□ -0.97
COL3A1-202ENST00000317840 RIPPLY2Q5TAB7 128 aa8.99□□□□□ -0.97
COL3A1-202ENST00000317840 SPSB3Q6PJ21 355 aa8.99□□□□□ -0.97
COL3A1-202ENST00000317840 CLEC18CQ8NCF0 446 aa8.99□□□□□ -0.97
COL3A1-202ENST00000317840 TMEM56Q96MV1 263 aa8.99□□□□□ -0.97
COL3A1-202ENST00000317840 SIGLEC12Q96PQ1 595 aa8.99□□□□□ -0.97
COL3A1-202ENST00000317840 MAP1LC3BQ9GZQ8 125 aa8.99□□□□□ -0.97
COL3A1-202ENST00000317840 TMEM56-RWDD3S4R434 201 aa8.99□□□□□ -0.97
COL3A1-202ENST00000317840 USF3Q68DE3 2245 aa8.99□□□□□ -0.97
COL3A1-202ENST00000317840 PRR14LQ5THK1 2151 aa8.99□□□□□ -0.97
COL3A1-202ENST00000317840 B4E171 279 aa8.99□□□□□ -0.97
COL3A1-202ENST00000317840 KLK10O43240 276 aa8.99□□□□□ -0.97
COL3A1-202ENST00000317840 UCP1P25874 307 aa8.99□□□□□ -0.97
COL3A1-202ENST00000317840 TSPAN7P41732 249 aa8.99□□□□□ -0.97
COL3A1-202ENST00000317840 FOXG1P55316 489 aaPredicted RBP8.99□□□□□ -0.97
COL3A1-202ENST00000317840 ELOBQ15370 118 aa8.99□□□□□ -0.97
COL3A1-202ENST00000317840 GFI1BQ5VTD9 330 aa8.99□□□□□ -0.97
COL3A1-202ENST00000317840 TMEM42Q69YG0 159 aa8.99□□□□□ -0.97
COL3A1-202ENST00000317840 VHLLQ6RSH7 139 aa8.99□□□□□ -0.97
COL3A1-202ENST00000317840 SPNS3Q6ZMD2 512 aa8.99□□□□□ -0.97
COL3A1-202ENST00000317840 FOXL2NBQ6ZUU3 175 aa8.99□□□□□ -0.97
COL3A1-202ENST00000317840 OR10V1Q8NGI7 309 aa8.99□□□□□ -0.97
COL3A1-202ENST00000317840 FAM173AQ9BQD7 235 aa8.99□□□□□ -0.97
COL3A1-202ENST00000317840 RIMS4Q9H426 269 aaPredicted RBP8.99□□□□□ -0.97
COL3A1-202ENST00000317840 IL36GQ9NZH8 169 aa8.99□□□□□ -0.97
COL3A1-202ENST00000317840 LAMP3Q9UQV4 416 aa8.99□□□□□ -0.97
COL3A1-202ENST00000317840 ABCA4P78363 2273 aa8.99□□□□□ -0.97
COL3A1-202ENST00000317840 LOC102723996A0A087X1L8 192 aa8.99□□□□□ -0.97
COL3A1-202ENST00000317840 PIGBOS1A0A0B4J2F0 54 aa8.99□□□□□ -0.97
COL3A1-202ENST00000317840 IL2RGP31785 369 aa8.99□□□□□ -0.97
COL3A1-202ENST00000317840 GNG3P63215 75 aa8.99□□□□□ -0.97
COL3A1-202ENST00000317840 ID3Q02535 119 aa8.99□□□□□ -0.97
COL3A1-202ENST00000317840 CEACAM21Q3KPI0 293 aa8.99□□□□□ -0.97
COL3A1-202ENST00000317840 HPSE2Q8WWQ2 592 aa8.99□□□□□ -0.97
COL3A1-202ENST00000317840 TRIB1Q96RU8 372 aa8.99□□□□□ -0.97
COL3A1-202ENST00000317840 SLC25A22Q9H936 323 aa8.99□□□□□ -0.97
COL3A1-202ENST00000317840 PLSCR2Q9NRY7 297 aa8.99□□□□□ -0.97
COL3A1-202ENST00000317840 KCNIP1Q9NZI2 227 aa8.99□□□□□ -0.97
COL3A1-202ENST00000317840 OR1A1Q9P1Q5 309 aa8.99□□□□□ -0.97
COL3A1-202ENST00000317840 A0A1W2PPQ1 181 aa8.98□□□□□ -0.97
COL3A1-202ENST00000317840 C19orf67A6NJJ6 358 aa8.98□□□□□ -0.97
COL3A1-202ENST00000317840 H0Y980 276 aa8.98□□□□□ -0.97
COL3A1-202ENST00000317840 PHOX2AO14813 284 aa8.98□□□□□ -0.97
COL3A1-202ENST00000317840 IGHV2-5P01817 119 aa8.98□□□□□ -0.97
COL3A1-202ENST00000317840 BCL2P10415 239 aa8.98□□□□□ -0.97
COL3A1-202ENST00000317840 RAC2P15153 192 aa8.98□□□□□ -0.97
COL3A1-202ENST00000317840 HOXA5P20719 270 aa8.98□□□□□ -0.97
COL3A1-202ENST00000317840 LTC4SQ16873 150 aa8.98□□□□□ -0.97
COL3A1-202ENST00000317840 NCR3LG1Q68D85 454 aa8.98□□□□□ -0.97
COL3A1-202ENST00000317840 SSX9Q7RTT3 188 aa8.98□□□□□ -0.97
COL3A1-202ENST00000317840 CLDND2Q8NHS1 167 aa8.98□□□□□ -0.97
COL3A1-202ENST00000317840 RHOVQ96L33 236 aa8.98□□□□□ -0.97
COL3A1-202ENST00000317840 UFSP2Q9NUQ7 469 aa8.98□□□□□ -0.97
COL3A1-202ENST00000317840 MED13LQ71F56 2210 aa8.98□□□□□ -0.97
COL3A1-202ENST00000317840 H7BYZ3 331 aa8.98□□□□□ -0.97
COL3A1-202ENST00000317840 NTN3O00634 580 aaPredicted RBP8.98□□□□□ -0.97
COL3A1-202ENST00000317840 FTH1P19P0C7X4 201 aa8.98□□□□□ -0.97
COL3A1-202ENST00000317840 HOXA6P31267 233 aa8.98□□□□□ -0.97
COL3A1-202ENST00000317840 PYY3Q5JQD4 70 aa8.98□□□□□ -0.97
COL3A1-202ENST00000317840 GGNQ86UU5 652 aa8.98□□□□□ -0.97
COL3A1-202ENST00000317840 CEP295Q9C0D2 2601 aa8.98□□□□□ -0.97
COL3A1-202ENST00000317840 DKK1O94907 266 aa8.98□□□□□ -0.97
COL3A1-202ENST00000317840 TRGC1P0CF51 173 aa8.98□□□□□ -0.97
COL3A1-202ENST00000317840 BMP5P22003 454 aa8.98□□□□□ -0.97
COL3A1-202ENST00000317840 CEACAM6P40199 344 aa8.98□□□□□ -0.97
COL3A1-202ENST00000317840 ZNF816Q0VGE8 651 aaPredicted RBP8.98□□□□□ -0.97
COL3A1-202ENST00000317840 HERPUD1Q15011 391 aa8.98□□□□□ -0.97
COL3A1-202ENST00000317840 ZNF766Q5HY98 468 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms