RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 RAB6AP20340 208 aa6.4□□□□□ -1.39
CDC42-201ENST00000315554 SAA4P35542 130 aa6.4□□□□□ -1.39
CDC42-201ENST00000315554 GNG10P50151 68 aa6.4□□□□□ -1.39
CDC42-201ENST00000315554 UBE2E1P51965 193 aa6.4□□□□□ -1.39
CDC42-201ENST00000315554 RIPPLY3P57055 190 aa6.4□□□□□ -1.39
CDC42-201ENST00000315554 MADCAM1Q13477 382 aa6.4□□□□□ -1.39
CDC42-201ENST00000315554 SPCS2Q15005 226 aa6.4□□□□□ -1.39
CDC42-201ENST00000315554 PLA1AQ53H76 456 aa6.4□□□□□ -1.39
CDC42-201ENST00000315554 ZNF565Q8N9K5 539 aa6.4□□□□□ -1.39
CDC42-201ENST00000315554 OR10R2Q8NGX6 335 aa6.4□□□□□ -1.39
CDC42-201ENST00000315554 OR1L1Q8NH94 360 aa6.4□□□□□ -1.39
CDC42-201ENST00000315554 MAFIPQ8WZ33 124 aa6.4□□□□□ -1.39
CDC42-201ENST00000315554 SLC25A38Q96DW6 304 aa6.4□□□□□ -1.39
CDC42-201ENST00000315554 RAB3CQ96E17 227 aa6.4□□□□□ -1.39
CDC42-201ENST00000315554 SPXQ9BT56 116 aa6.4□□□□□ -1.39
CDC42-201ENST00000315554 KRTAP4-2Q9BYR5 136 aa6.4□□□□□ -1.39
CDC42-201ENST00000315554 DCSTAMPQ9H295 470 aa6.4□□□□□ -1.39
CDC42-201ENST00000315554 TMEM133Q9H2Q1 129 aa6.4□□□□□ -1.39
CDC42-201ENST00000315554 UNKLQ9H9P5 680 aaKnown RBP6.4□□□□□ -1.39
CDC42-201ENST00000315554 ZNF286AQ9HBT8 521 aa6.4□□□□□ -1.39
CDC42-201ENST00000315554 ESM1Q9NQ30 184 aa6.4□□□□□ -1.39
CDC42-201ENST00000315554 IDI2-AS1Q9NZ38 188 aa6.4□□□□□ -1.39
CDC42-201ENST00000315554 KCNK7Q9Y2U2 307 aa6.4□□□□□ -1.39
CDC42-201ENST00000315554 KIAA2026Q5HYC2 2103 aa6.39□□□□□ -1.39
CDC42-201ENST00000315554 IGHV2-26A0A0B4J1V2 119 aa6.39□□□□□ -1.39
CDC42-201ENST00000315554 C15orf65H3BRN8 121 aa6.39□□□□□ -1.39
CDC42-201ENST00000315554 RAB27BO00194 218 aa6.39□□□□□ -1.39
CDC42-201ENST00000315554 PAX4O43316 350 aa6.39□□□□□ -1.39
CDC42-201ENST00000315554 TCF21O43680 179 aa6.39□□□□□ -1.39
CDC42-201ENST00000315554 GLAP06280 429 aa6.39□□□□□ -1.39
CDC42-201ENST00000315554 H2AFB1P0C5Y9 115 aa6.39□□□□□ -1.39
CDC42-201ENST00000315554 H2AFB2P0C5Z0 115 aa6.39□□□□□ -1.39
CDC42-201ENST00000315554 PAX5Q02548 391 aa6.39□□□□□ -1.39
CDC42-201ENST00000315554 BAMBIQ13145 260 aa6.39□□□□□ -1.39
CDC42-201ENST00000315554 LDLRAD2Q5SZI1 272 aa6.39□□□□□ -1.39
CDC42-201ENST00000315554 HEPN1Q6WQI6 88 aa6.39□□□□□ -1.39
CDC42-201ENST00000315554 C9orf139Q6ZV77 190 aa6.39□□□□□ -1.39
CDC42-201ENST00000315554 USP43Q70EL4 1123 aa6.39□□□□□ -1.39
CDC42-201ENST00000315554 DYNAPQ8N1N2 210 aa6.39□□□□□ -1.39
CDC42-201ENST00000315554 ABHD12Q8N2K0 398 aa6.39□□□□□ -1.39
CDC42-201ENST00000315554 OR10V1Q8NGI7 309 aa6.39□□□□□ -1.39
CDC42-201ENST00000315554 OR13D1Q8NGV5 346 aa6.39□□□□□ -1.39
CDC42-201ENST00000315554 ZNF418Q8TF45 676 aaPredicted RBP6.39□□□□□ -1.39
CDC42-201ENST00000315554 TAF15Q92804 592 aaKnown RBP eCLIP6.39□□□□□ -1.39
CDC42-201ENST00000315554 SLC25A46Q96AG3 418 aa6.39□□□□□ -1.39
CDC42-201ENST00000315554 AJUBAQ96IF1 538 aa6.39□□□□□ -1.39
CDC42-201ENST00000315554 KIRREL1Q96J84 757 aa6.39□□□□□ -1.39
CDC42-201ENST00000315554 CITED2Q99967 270 aaPredicted RBP6.39□□□□□ -1.39
CDC42-201ENST00000315554 CMSS1Q9BQ75 279 aaKnown RBP6.39□□□□□ -1.39
CDC42-201ENST00000315554 CLEC7AQ9BXN2 247 aa6.39□□□□□ -1.39
CDC42-201ENST00000315554 TAF9BQ9HBM6 251 aa6.39□□□□□ -1.39
CDC42-201ENST00000315554 RHBDL2Q9NX52 303 aa6.39□□□□□ -1.39
CDC42-201ENST00000315554 COMMD3Q9UBI1 195 aa6.39□□□□□ -1.39
CDC42-201ENST00000315554 FAM96BQ9Y3D0 163 aa6.39□□□□□ -1.39
CDC42-201ENST00000315554 ZFHX3Q15911 3703 aa6.38□□□□□ -1.39
CDC42-201ENST00000315554 DSCAML1Q8TD84 2053 aa6.38□□□□□ -1.39
CDC42-201ENST00000315554 METTL21EPA6NDL7 271 aa6.38□□□□□ -1.39
CDC42-201ENST00000315554 CCDC160A6NGH7 325 aa6.38□□□□□ -1.39
CDC42-201ENST00000315554 DNAJC9-AS1A6NH13 148 aa6.38□□□□□ -1.39
CDC42-201ENST00000315554 ODF3BA8MYP8 253 aa6.38□□□□□ -1.39
CDC42-201ENST00000315554 NPIPB11E5RHQ5 1161 aa6.38□□□□□ -1.39
CDC42-201ENST00000315554 H3BUI4 141 aa6.38□□□□□ -1.39
CDC42-201ENST00000315554 SDCBPO00560 298 aaPredicted RBP6.38□□□□□ -1.39
CDC42-201ENST00000315554 MFNGO00587 321 aa6.38□□□□□ -1.39
CDC42-201ENST00000315554 HOXA3O43365 443 aaPredicted RBP6.38□□□□□ -1.39
CDC42-201ENST00000315554 HBZP02008 142 aa6.38□□□□□ -1.39
CDC42-201ENST00000315554 RBP4P02753 201 aa6.38□□□□□ -1.39
CDC42-201ENST00000315554 PTHLHP12272 177 aa6.38□□□□□ -1.39
CDC42-201ENST00000315554 HIST1H1DP16402 221 aaKnown RBP6.38□□□□□ -1.39
CDC42-201ENST00000315554 RANBP1P43487 201 aa6.38□□□□□ -1.39
CDC42-201ENST00000315554 LGALS4P56470 323 aa6.38□□□□□ -1.39
CDC42-201ENST00000315554 VAMP2P63027 116 aa6.38□□□□□ -1.39
CDC42-201ENST00000315554 MRPS15P82914 257 aaKnown RBP6.38□□□□□ -1.39
CDC42-201ENST00000315554 SCGB2A2Q13296 93 aa6.38□□□□□ -1.39
CDC42-201ENST00000315554 GNMTQ14749 295 aa6.38□□□□□ -1.39
CDC42-201ENST00000315554 CDNFQ49AH0 187 aa6.38□□□□□ -1.39
CDC42-201ENST00000315554 C6orf183Q5T699 404 aa6.38□□□□□ -1.39
CDC42-201ENST00000315554 RBMS3Q6XE24 437 aaKnown RBP6.38□□□□□ -1.39
CDC42-201ENST00000315554 GAPTQ8N292 157 aa6.38□□□□□ -1.39
CDC42-201ENST00000315554 SAMD12Q8N8I0 201 aa6.38□□□□□ -1.39
CDC42-201ENST00000315554 ZDHHC22Q8N966 263 aa6.38□□□□□ -1.39
CDC42-201ENST00000315554 OR52L2PQ8NGH6 319 aa6.38□□□□□ -1.39
CDC42-201ENST00000315554 PTX4Q96A99 478 aa6.38□□□□□ -1.39
CDC42-201ENST00000315554 ISOC1Q96CN7 298 aa6.38□□□□□ -1.39
CDC42-201ENST00000315554 KCNIP1Q9NZI2 227 aa6.38□□□□□ -1.39
CDC42-201ENST00000315554 ABRACLQ9P1F3 81 aa6.38□□□□□ -1.39
CDC42-201ENST00000315554 ZNF230Q9UIE0 474 aaPredicted RBP6.38□□□□□ -1.39
CDC42-201ENST00000315554 HSF4Q9ULV5 492 aa6.38□□□□□ -1.39
CDC42-201ENST00000315554 HILPDAQ9Y5L2 63 aa6.38□□□□□ -1.39
CDC42-201ENST00000315554 CEPT1Q9Y6K0 416 aa6.38□□□□□ -1.39
CDC42-201ENST00000315554 TRAV18A0A075B6X5 111 aa6.37□□□□□ -1.39
CDC42-201ENST00000315554 ANKRD34BA5PLL1 514 aa6.37□□□□□ -1.39
CDC42-201ENST00000315554 TMEM235A6NFC5 223 aa6.37□□□□□ -1.39
CDC42-201ENST00000315554 H3BMQ9 156 aa6.37□□□□□ -1.39
CDC42-201ENST00000315554 TOR1AO14656 332 aa6.37□□□□□ -1.39
CDC42-201ENST00000315554 SLC31A2O15432 143 aa6.37□□□□□ -1.39
CDC42-201ENST00000315554 SPINT2O43291 252 aa6.37□□□□□ -1.39
CDC42-201ENST00000315554 CA11O75493 328 aa6.37□□□□□ -1.39
CDC42-201ENST00000315554 TSPAN9O75954 239 aa6.37□□□□□ -1.39
CDC42-201ENST00000315554 NAPSAO96009 420 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms