RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 OR2V1Q8NHB1 315 aa9.42□□□□□ -0.9
LSM3-201ENST00000306024 PSMF1Q92530 271 aa9.42□□□□□ -0.9
LSM3-201ENST00000306024 TTTY12Q9BZ98 90 aa9.42□□□□□ -0.9
LSM3-201ENST00000306024 MAP1LC3BQ9GZQ8 125 aa9.42□□□□□ -0.9
LSM3-201ENST00000306024 TXNIPQ9H3M7 391 aa9.42□□□□□ -0.9
LSM3-201ENST00000306024 DOCK10Q96BY6 2186 aa9.42□□□□□ -0.9
LSM3-201ENST00000306024 CA11O75493 328 aa9.42□□□□□ -0.9
LSM3-201ENST00000306024 RAD51DO75771 328 aa9.42□□□□□ -0.9
LSM3-201ENST00000306024 LCATP04180 440 aa9.42□□□□□ -0.9
LSM3-201ENST00000306024 RFPL3SP0C7P2 107 aa9.42□□□□□ -0.9
LSM3-201ENST00000306024 THBS4P35443 961 aa9.42□□□□□ -0.9
LSM3-201ENST00000306024 CHRNA7P36544 502 aa9.42□□□□□ -0.9
LSM3-201ENST00000306024 FAM3BP58499 235 aaPredicted RBP9.42□□□□□ -0.9
LSM3-201ENST00000306024 PLAURQ03405 335 aa9.42□□□□□ -0.9
LSM3-201ENST00000306024 ZNF506Q5JVG8 444 aa9.42□□□□□ -0.9
LSM3-201ENST00000306024 C1orf194Q5T5A4 169 aa9.42□□□□□ -0.9
LSM3-201ENST00000306024 DYRK2Q92630 601 aa9.42□□□□□ -0.9
LSM3-201ENST00000306024 SLAMF6Q96DU3 332 aa9.42□□□□□ -0.9
LSM3-201ENST00000306024 NECAP2Q9NVZ3 263 aa9.42□□□□□ -0.9
LSM3-201ENST00000306024 PCNX1Q96RV3 2341 aa9.42□□□□□ -0.9
LSM3-201ENST00000306024 DXOO77932 396 aaKnown RBP9.42□□□□□ -0.9
LSM3-201ENST00000306024 SELEP16581 610 aa9.42□□□□□ -0.9
LSM3-201ENST00000306024 EGR4Q05215 589 aa9.42□□□□□ -0.9
LSM3-201ENST00000306024 Q6ZN92 141 aa9.42□□□□□ -0.9
LSM3-201ENST00000306024 SLC25A26Q70HW3 274 aa9.42□□□□□ -0.9
LSM3-201ENST00000306024 TMEM251Q8N6I4 163 aa9.42□□□□□ -0.9
LSM3-201ENST00000306024 GPX7Q96SL4 187 aaPredicted RBP9.42□□□□□ -0.9
LSM3-201ENST00000306024 ULBP2Q9BZM5 246 aa9.42□□□□□ -0.9
LSM3-201ENST00000306024 CALHM2Q9HA72 323 aa9.42□□□□□ -0.9
LSM3-201ENST00000306024 NAT8Q9UHE5 227 aa9.42□□□□□ -0.9
LSM3-201ENST00000306024 SH3BGRL2Q9UJC5 107 aa9.42□□□□□ -0.9
LSM3-201ENST00000306024 LIPT2A6NK58 231 aa9.41□□□□□ -0.9
LSM3-201ENST00000306024 TM4SF5O14894 197 aa9.41□□□□□ -0.9
LSM3-201ENST00000306024 VAMP5O95183 116 aa9.41□□□□□ -0.9
LSM3-201ENST00000306024 BGLAPP02818 100 aa9.41□□□□□ -0.9
LSM3-201ENST00000306024 MAS1LP35410 378 aa9.41□□□□□ -0.9
LSM3-201ENST00000306024 PSMB3P49720 205 aa9.41□□□□□ -0.9
LSM3-201ENST00000306024 FMODQ06828 376 aa9.41□□□□□ -0.9
LSM3-201ENST00000306024 OR52M1Q8NGK5 317 aa9.41□□□□□ -0.9
LSM3-201ENST00000306024 OR4F5Q8NH21 305 aa9.41□□□□□ -0.9
LSM3-201ENST00000306024 OR4F4Q96R69 305 aa9.41□□□□□ -0.9
LSM3-201ENST00000306024 ZDHHC11Q9H8X9 412 aa9.41□□□□□ -0.9
LSM3-201ENST00000306024 GPR84Q9NQS5 396 aa9.41□□□□□ -0.9
LSM3-201ENST00000306024 PLPP3O14495 311 aa9.41□□□□□ -0.9
LSM3-201ENST00000306024 HMGB3O15347 200 aaKnown RBP9.41□□□□□ -0.9
LSM3-201ENST00000306024 MRPL33O75394 65 aaKnown RBP9.41□□□□□ -0.9
LSM3-201ENST00000306024 C6orf201Q7Z4U5 140 aa9.41□□□□□ -0.9
LSM3-201ENST00000306024 OR10D3Q8NH80 312 aa9.41□□□□□ -0.9
LSM3-201ENST00000306024 PIGTQ969N2 578 aa9.41□□□□□ -0.9
LSM3-201ENST00000306024 OXGR1Q96P68 337 aa9.41□□□□□ -0.9
LSM3-201ENST00000306024 GAL3ST2Q9H3Q3 398 aa9.41□□□□□ -0.9
LSM3-201ENST00000306024 ZNF442Q9H7R0 627 aa9.41□□□□□ -0.9
LSM3-201ENST00000306024 ZNF286AQ9HBT8 521 aa9.41□□□□□ -0.9
LSM3-201ENST00000306024 FREM3P0C091 2139 aa9.41□□□□□ -0.9
LSM3-201ENST00000306024 IGHV3-9P01782 118 aa9.41□□□□□ -0.9
LSM3-201ENST00000306024 BCL2P10415 239 aa9.41□□□□□ -0.9
LSM3-201ENST00000306024 RPS4XP62701 263 aaKnown RBP9.41□□□□□ -0.9
LSM3-201ENST00000306024 GAGE1Q13065 139 aa9.41□□□□□ -0.9
LSM3-201ENST00000306024 FHL1Q13642 323 aa9.41□□□□□ -0.9
LSM3-201ENST00000306024 FAM78BQ5VT40 261 aa9.41□□□□□ -0.9
LSM3-201ENST00000306024 FDX2Q6P4F2 183 aa9.41□□□□□ -0.9
LSM3-201ENST00000306024 RNASEH2CQ8TDP1 164 aaKnown RBP9.41□□□□□ -0.9
LSM3-201ENST00000306024 OR5G3P0C626 314 aa9.4□□□□□ -0.9
LSM3-201ENST00000306024 PLAC9Q5JTB6 97 aa9.4□□□□□ -0.9
LSM3-201ENST00000306024 C9orf135Q5VTT2 229 aa9.4□□□□□ -0.9
LSM3-201ENST00000306024 CNEP1R1Q8N9A8 125 aa9.4□□□□□ -0.9
LSM3-201ENST00000306024 LYPD6BQ8NI32 183 aa9.4□□□□□ -0.9
LSM3-201ENST00000306024 PARD6GQ9BYG4 376 aaPredicted RBP9.4□□□□□ -0.9
LSM3-201ENST00000306024 DEPPQ9NTK1 212 aa9.4□□□□□ -0.9
LSM3-201ENST00000306024 ZNF586Q9NXT0 402 aa9.4□□□□□ -0.9
LSM3-201ENST00000306024 CHD8Q9HCK8 2581 aa9.4□□□□□ -0.9
LSM3-201ENST00000306024 TRBV24-1A0A075B6N3 115 aa9.4□□□□□ -0.9
LSM3-201ENST00000306024 A0A0J9YW62 118 aa9.4□□□□□ -0.9
LSM3-201ENST00000306024 A0A1B0GU03 582 aa9.4□□□□□ -0.9
LSM3-201ENST00000306024 SERPINE3A8MV23 424 aa9.4□□□□□ -0.9
LSM3-201ENST00000306024 NEURL1O76050 574 aa9.4□□□□□ -0.9
LSM3-201ENST00000306024 UCP3P55916 312 aa9.4□□□□□ -0.9
LSM3-201ENST00000306024 ZNF154Q13106 437 aa9.4□□□□□ -0.9
LSM3-201ENST00000306024 C3AR1Q16581 482 aa9.4□□□□□ -0.9
LSM3-201ENST00000306024 LIAT1Q6ZQX7 453 aa9.4□□□□□ -0.9
LSM3-201ENST00000306024 SPACA3Q8IXA5 215 aa9.4□□□□□ -0.9
LSM3-201ENST00000306024 MIEN1Q9BRT3 115 aa9.4□□□□□ -0.9
LSM3-201ENST00000306024 OSGIN2Q9Y236 505 aa9.4□□□□□ -0.9
LSM3-201ENST00000306024 PIEZO2Q9H5I5 2752 aa9.4□□□□□ -0.9
LSM3-201ENST00000306024 IGFBP3P17936 291 aaPredicted RBP9.4□□□□□ -0.91
LSM3-201ENST00000306024 DEGS2Q6QHC5 323 aa9.4□□□□□ -0.91
LSM3-201ENST00000306024 SIGLECL1Q8N7X8 197 aa9.4□□□□□ -0.91
LSM3-201ENST00000306024 SARAFQ96BY9 339 aa9.4□□□□□ -0.91
LSM3-201ENST00000306024 UCN2Q96RP3 112 aa9.4□□□□□ -0.91
LSM3-201ENST00000306024 RPL36A-HNRNPH2H7BZ11 118 aa9.39□□□□□ -0.91
LSM3-201ENST00000306024 ASAH2BP0C7U1 165 aa9.39□□□□□ -0.91
LSM3-201ENST00000306024 PTGDSP41222 190 aa9.39□□□□□ -0.91
LSM3-201ENST00000306024 PCK2Q16822 640 aa9.39□□□□□ -0.91
LSM3-201ENST00000306024 ATP6V1FQ16864 119 aa9.39□□□□□ -0.91
LSM3-201ENST00000306024 PRR18Q8N4B5 295 aa9.39□□□□□ -0.91
LSM3-201ENST00000306024 HSPB9Q9BQS6 159 aa9.39□□□□□ -0.91
LSM3-201ENST00000306024 MSRB2Q9Y3D2 182 aa9.39□□□□□ -0.91
LSM3-201ENST00000306024 ANKRD11Q6UB99 2663 aaPredicted RBP9.39□□□□□ -0.91
LSM3-201ENST00000306024 ACACBO00763 2458 aa9.39□□□□□ -0.91
LSM3-201ENST00000306024 F5H5K5 113 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms