RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 TMEM212A6NML5 194 aa7.2□□□□□ -1.26
CNOT9-202ENST00000295701 NPIPB6E9PJ23 425 aa7.2□□□□□ -1.26
CNOT9-202ENST00000295701 EI24O14681 340 aa7.2□□□□□ -1.26
CNOT9-202ENST00000295701 ALPLP05186 524 aa7.2□□□□□ -1.26
CNOT9-202ENST00000295701 RPSAP08865 295 aaKnown RBP7.2□□□□□ -1.26
CNOT9-202ENST00000295701 SERPINA2P20848 420 aa7.2□□□□□ -1.26
CNOT9-202ENST00000295701 VDAC1P21796 283 aa7.2□□□□□ -1.26
CNOT9-202ENST00000295701 PPIFP30405 207 aaKnown RBP7.2□□□□□ -1.26
CNOT9-202ENST00000295701 SOX6P35712 828 aa7.2□□□□□ -1.26
CNOT9-202ENST00000295701 KCNJ3P48549 501 aa7.2□□□□□ -1.26
CNOT9-202ENST00000295701 C1orf146Q5VVC0 180 aa7.2□□□□□ -1.26
CNOT9-202ENST00000295701 XAF1Q6GPH4 301 aa7.2□□□□□ -1.26
CNOT9-202ENST00000295701 SLC25A48Q6ZT89 311 aaKnown RBP7.2□□□□□ -1.26
CNOT9-202ENST00000295701 ZNF491Q8N8L2 437 aa7.2□□□□□ -1.26
CNOT9-202ENST00000295701 ZNF439Q8NDP4 499 aa7.2□□□□□ -1.26
CNOT9-202ENST00000295701 OR52M1Q8NGK5 317 aa7.2□□□□□ -1.26
CNOT9-202ENST00000295701 OR52I1Q8NGK6 324 aa7.2□□□□□ -1.26
CNOT9-202ENST00000295701 OR13C5Q8NGS8 318 aa7.2□□□□□ -1.26
CNOT9-202ENST00000295701 OR4K15Q8NH41 348 aa7.2□□□□□ -1.26
CNOT9-202ENST00000295701 OR1L1Q8NH94 360 aa7.2□□□□□ -1.26
CNOT9-202ENST00000295701 MYOZ3Q8TDC0 251 aa7.2□□□□□ -1.26
CNOT9-202ENST00000295701 PYDC1Q8WXC3 89 aa7.2□□□□□ -1.26
CNOT9-202ENST00000295701 DCUN1D4Q92564 292 aa7.2□□□□□ -1.26
CNOT9-202ENST00000295701 JAM3Q9BX67 310 aa7.2□□□□□ -1.26
CNOT9-202ENST00000295701 METTL9Q9H1A3 318 aa7.2□□□□□ -1.26
CNOT9-202ENST00000295701 ERVK13-1Q9NX77 482 aa7.2□□□□□ -1.26
CNOT9-202ENST00000295701 SIRT4Q9Y6E7 314 aaPredicted RBP7.2□□□□□ -1.26
CNOT9-202ENST00000295701 SMAD5-AS1Q9Y6J3 95 aa7.2□□□□□ -1.26
CNOT9-202ENST00000295701 MAGEA13PA6NCF6 341 aa7.19□□□□□ -1.26
CNOT9-202ENST00000295701 C12orf77C9JDV5 145 aa7.19□□□□□ -1.26
CNOT9-202ENST00000295701 MAGEB3O15480 346 aa7.19□□□□□ -1.26
CNOT9-202ENST00000295701 RRP9O43818 475 aaKnown RBP7.19□□□□□ -1.26
CNOT9-202ENST00000295701 IGF1P05019 195 aa7.19□□□□□ -1.26
CNOT9-202ENST00000295701 MED14OSP0DP75 135 aa7.19□□□□□ -1.26
CNOT9-202ENST00000295701 FCGR1AP12314 374 aa7.19□□□□□ -1.26
CNOT9-202ENST00000295701 SPNP16150 400 aa7.19□□□□□ -1.26
CNOT9-202ENST00000295701 GBX2P52951 348 aaPredicted RBP7.19□□□□□ -1.26
CNOT9-202ENST00000295701 SLURP1P55000 103 aa7.19□□□□□ -1.26
CNOT9-202ENST00000295701 ADARB1P78563 741 aaKnown RBP7.19□□□□□ -1.26
CNOT9-202ENST00000295701 TAGLNQ01995 201 aaKnown RBP7.19□□□□□ -1.26
CNOT9-202ENST00000295701 SYT6Q5T7P8 510 aaPredicted RBP7.19□□□□□ -1.26
CNOT9-202ENST00000295701 MEDAGQ5VYS4 303 aa7.19□□□□□ -1.26
CNOT9-202ENST00000295701 ZFAND6Q6FIF0 208 aa7.19□□□□□ -1.26
CNOT9-202ENST00000295701 ZNF497Q6ZNH5 498 aa7.19□□□□□ -1.26
CNOT9-202ENST00000295701 SYS1Q8N2H4 156 aa7.19□□□□□ -1.26
CNOT9-202ENST00000295701 PRR18Q8N4B5 295 aa7.19□□□□□ -1.26
CNOT9-202ENST00000295701 NEK7Q8TDX7 302 aa7.19□□□□□ -1.26
CNOT9-202ENST00000295701 CASTOR1Q8WTX7 329 aa7.19□□□□□ -1.26
CNOT9-202ENST00000295701 GON7Q9BXV9 100 aa7.19□□□□□ -1.26
CNOT9-202ENST00000295701 IFT22Q9H7X7 185 aa7.19□□□□□ -1.26
CNOT9-202ENST00000295701 ZNF107Q9UII5 783 aaPredicted RBP7.19□□□□□ -1.26
CNOT9-202ENST00000295701 TRIM64CA6NLI5 447 aa7.18□□□□□ -1.26
CNOT9-202ENST00000295701 AIPO00170 330 aa7.18□□□□□ -1.26
CNOT9-202ENST00000295701 ATP6V0E1O15342 81 aa7.18□□□□□ -1.26
CNOT9-202ENST00000295701 ORC5O43913 435 aa7.18□□□□□ -1.26
CNOT9-202ENST00000295701 HBZP02008 142 aa7.18□□□□□ -1.26
CNOT9-202ENST00000295701 CSTBP04080 98 aaKnown RBP7.18□□□□□ -1.26
CNOT9-202ENST00000295701 FRMD6-AS1P0C7T7 363 aa7.18□□□□□ -1.26
CNOT9-202ENST00000295701 LIMS3P0CW19 117 aa7.18□□□□□ -1.26
CNOT9-202ENST00000295701 LIMS4P0CW20 117 aa7.18□□□□□ -1.26
CNOT9-202ENST00000295701 RCC1P18754 421 aaPredicted RBP7.18□□□□□ -1.26
CNOT9-202ENST00000295701 IL3RAP26951 378 aa7.18□□□□□ -1.26
CNOT9-202ENST00000295701 BDKRB2P30411 391 aa7.18□□□□□ -1.26
CNOT9-202ENST00000295701 ZNF93P35789 620 aaPredicted RBP7.18□□□□□ -1.26
CNOT9-202ENST00000295701 ZNF137PP52743 207 aa7.18□□□□□ -1.26
CNOT9-202ENST00000295701 ZNF616Q08AN1 781 aa7.18□□□□□ -1.26
CNOT9-202ENST00000295701 LSAMPQ13449 338 aa7.18□□□□□ -1.26
CNOT9-202ENST00000295701 GNMTQ14749 295 aa7.18□□□□□ -1.26
CNOT9-202ENST00000295701 MMDQ15546 238 aa7.18□□□□□ -1.26
CNOT9-202ENST00000295701 SLC22A6Q4U2R8 563 aa7.18□□□□□ -1.26
CNOT9-202ENST00000295701 NHLRC3Q5JS37 347 aa7.18□□□□□ -1.26
CNOT9-202ENST00000295701 DDI2Q5TDH0 399 aa7.18□□□□□ -1.26
CNOT9-202ENST00000295701 HAPLN4Q86UW8 402 aa7.18□□□□□ -1.26
CNOT9-202ENST00000295701 C8orf31Q8N9H6 132 aa7.18□□□□□ -1.26
CNOT9-202ENST00000295701 RHOXF1Q8NHV9 184 aa7.18□□□□□ -1.26
CNOT9-202ENST00000295701 DLX4Q92988 240 aaPredicted RBP7.18□□□□□ -1.26
CNOT9-202ENST00000295701 UBE2E2Q96LR5 201 aa7.18□□□□□ -1.26
CNOT9-202ENST00000295701 ANKRD60Q9BZ19 345 aa7.18□□□□□ -1.26
CNOT9-202ENST00000295701 ISYNA1Q9NPH2 558 aa7.18□□□□□ -1.26
CNOT9-202ENST00000295701 IL36GQ9NZH8 169 aa7.18□□□□□ -1.26
CNOT9-202ENST00000295701 TRAPPC2LQ9UL33 140 aa7.18□□□□□ -1.26
CNOT9-202ENST00000295701 VSIG4Q9Y279 399 aa7.18□□□□□ -1.26
CNOT9-202ENST00000295701 GMPPBQ9Y5P6 360 aa7.18□□□□□ -1.26
CNOT9-202ENST00000295701 IGHV7-81A0A0B4J1V7 117 aa7.17□□□□□ -1.26
CNOT9-202ENST00000295701 SHISA3A0PJX4 238 aa7.17□□□□□ -1.26
CNOT9-202ENST00000295701 OVOL1O14753 267 aa7.17□□□□□ -1.26
CNOT9-202ENST00000295701 SOX15O60248 233 aa7.17□□□□□ -1.26
CNOT9-202ENST00000295701 SAP30O75446 220 aa7.17□□□□□ -1.26
CNOT9-202ENST00000295701 OR8U8P0C7N1 319 aa7.17□□□□□ -1.26
CNOT9-202ENST00000295701 LYL1P12980 280 aa7.17□□□□□ -1.26
CNOT9-202ENST00000295701 BLVRBP30043 206 aaPredicted RBP7.17□□□□□ -1.26
CNOT9-202ENST00000295701 ETV1P50549 477 aa7.17□□□□□ -1.26
CNOT9-202ENST00000295701 RAB9AP51151 201 aa7.17□□□□□ -1.26
CNOT9-202ENST00000295701 ACTBP60709 375 aa7.17□□□□□ -1.26
CNOT9-202ENST00000295701 NDPQ00604 133 aa7.17□□□□□ -1.26
CNOT9-202ENST00000295701 RUNX1Q01196 453 aa7.17□□□□□ -1.26
CNOT9-202ENST00000295701 SMN1Q16637 294 aaKnown RBP7.17□□□□□ -1.26
CNOT9-202ENST00000295701 MPV17LQ2QL34 196 aa7.17□□□□□ -1.26
CNOT9-202ENST00000295701 KLHL22Q53GT1 634 aa7.17□□□□□ -1.26
CNOT9-202ENST00000295701 OR2G6Q5TZ20 316 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms