RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 VAX1Q5SQQ9 334 aa14.35□□□□□ -0.11
SH3RF1-201ENST00000284637 A0A1B0GU03 582 aa14.35□□□□□ -0.11
SH3RF1-201ENST00000284637 OOEPA6NGQ2 149 aa14.35□□□□□ -0.11
SH3RF1-201ENST00000284637 UBALD2Q8IYN6 164 aa14.35□□□□□ -0.11
SH3RF1-201ENST00000284637 DNAJC4Q9NNZ3 241 aa14.35□□□□□ -0.11
SH3RF1-201ENST00000284637 CLEC5AQ9NY25 188 aa14.35□□□□□ -0.11
SH3RF1-201ENST00000284637 COA4Q9NYJ1 87 aa14.35□□□□□ -0.11
SH3RF1-201ENST00000284637 HES3Q5TGS1 186 aa14.35□□□□□ -0.11
SH3RF1-201ENST00000284637 LRRC75AQ8NAA5 344 aa14.35□□□□□ -0.11
SH3RF1-201ENST00000284637 DPF1Q92782 380 aa14.35□□□□□ -0.11
SH3RF1-201ENST00000284637 GAL3ST2Q9H3Q3 398 aa14.35□□□□□ -0.11
SH3RF1-201ENST00000284637 UNC13CQ8NB66 2214 aa14.35□□□□□ -0.11
SH3RF1-201ENST00000284637 HKR1P10072 659 aa14.34□□□□□ -0.11
SH3RF1-201ENST00000284637 PMCHL1Q16048 86 aa14.34□□□□□ -0.11
SH3RF1-201ENST00000284637 ZNF519Q8TB69 540 aa14.34□□□□□ -0.11
SH3RF1-201ENST00000284637 RALYQ9UKM9 306 aaKnown RBP14.34□□□□□ -0.11
SH3RF1-201ENST00000284637 CTXND1A0A1B0GTU2 59 aa14.34□□□□□ -0.11
SH3RF1-201ENST00000284637 PIN1P1O15428 100 aa14.34□□□□□ -0.11
SH3RF1-201ENST00000284637 GFRALQ6UXV0 394 aa14.34□□□□□ -0.11
SH3RF1-201ENST00000284637 APCDD1LQ8NCL9 501 aa14.34□□□□□ -0.11
SH3RF1-201ENST00000284637 GPR35Q9HC97 309 aa14.34□□□□□ -0.11
SH3RF1-201ENST00000284637 PCOLCE2Q9UKZ9 415 aa14.34□□□□□ -0.11
SH3RF1-201ENST00000284637 TRBV5-5A0A0J9YX44 114 aa14.34□□□□□ -0.11
SH3RF1-201ENST00000284637 RPL36A-HNRNPH2H7BZ11 118 aa14.34□□□□□ -0.11
SH3RF1-201ENST00000284637 CCL4P13236 92 aa14.34□□□□□ -0.11
SH3RF1-201ENST00000284637 LYRM7Q5U5X0 104 aa14.34□□□□□ -0.11
SH3RF1-201ENST00000284637 D2HGDHQ8N465 521 aa14.34□□□□□ -0.11
SH3RF1-201ENST00000284637 ZNF488Q96MN9 340 aa14.34□□□□□ -0.11
SH3RF1-201ENST00000284637 WFIKKN1Q96NZ8 548 aa14.34□□□□□ -0.11
SH3RF1-201ENST00000284637 RNF2Q99496 336 aa14.34□□□□□ -0.11
SH3RF1-201ENST00000284637 CLN8Q9UBY8 286 aa14.34□□□□□ -0.11
SH3RF1-201ENST00000284637 HELTA6NFD8 242 aa14.34□□□□□ -0.11
SH3RF1-201ENST00000284637 PRSS1P07477 247 aa14.34□□□□□ -0.11
SH3RF1-201ENST00000284637 FCGR3AP08637 254 aa14.34□□□□□ -0.11
SH3RF1-201ENST00000284637 PLP1P60201 277 aa14.34□□□□□ -0.11
SH3RF1-201ENST00000284637 LHX9Q9NQ69 397 aa14.34□□□□□ -0.11
SH3RF1-201ENST00000284637 PAPPAQ13219 1627 aa14.34□□□□□ -0.11
SH3RF1-201ENST00000284637 LMX1BO60663 402 aa14.33□□□□□ -0.11
SH3RF1-201ENST00000284637 SRSF10O75494 262 aaKnown RBP14.33□□□□□ -0.11
SH3RF1-201ENST00000284637 SOD3P08294 240 aa14.33□□□□□ -0.11
SH3RF1-201ENST00000284637 DANCRP0C864 163 aa14.33□□□□□ -0.11
SH3RF1-201ENST00000284637 ID4P47928 161 aa14.33□□□□□ -0.11
SH3RF1-201ENST00000284637 RND3P61587 244 aa14.33□□□□□ -0.11
SH3RF1-201ENST00000284637 TNXAQ16473 311 aa14.33□□□□□ -0.11
SH3RF1-201ENST00000284637 TMEM97Q5BJF2 176 aa14.33□□□□□ -0.11
SH3RF1-201ENST00000284637 SLC23A3Q6PIS1 610 aa14.33□□□□□ -0.11
SH3RF1-201ENST00000284637 OR2Y1Q8NGV0 311 aa14.33□□□□□ -0.11
SH3RF1-201ENST00000284637 MAP1LC3CQ9BXW4 147 aa14.33□□□□□ -0.11
SH3RF1-201ENST00000284637 HEXA-AS1Q9H8Q6 139 aa14.33□□□□□ -0.11
SH3RF1-201ENST00000284637 TMEM38BQ9NVV0 291 aa14.33□□□□□ -0.11
SH3RF1-201ENST00000284637 GPR132Q9UNW8 380 aa14.33□□□□□ -0.11
SH3RF1-201ENST00000284637 SHISA3A0PJX4 238 aa14.33□□□□□ -0.12
SH3RF1-201ENST00000284637 KIR2DL1P43626 348 aaPredicted RBP14.33□□□□□ -0.12
SH3RF1-201ENST00000284637 SMOC1Q9H4F8 434 aa14.33□□□□□ -0.12
SH3RF1-201ENST00000284637 FAM157AC9JC47 383 aa14.33□□□□□ -0.12
SH3RF1-201ENST00000284637 TFF2Q03403 129 aa14.33□□□□□ -0.12
SH3RF1-201ENST00000284637 PLPPR5Q32ZL2 321 aa14.33□□□□□ -0.12
SH3RF1-201ENST00000284637 OR2M3Q8NG83 312 aa14.33□□□□□ -0.12
SH3RF1-201ENST00000284637 ZNF721Q8TF20 911 aa14.33□□□□□ -0.12
SH3RF1-201ENST00000284637 RSG1Q9BU20 258 aa14.33□□□□□ -0.12
SH3RF1-201ENST00000284637 J3QT63 122 aa14.33□□□□□ -0.12
SH3RF1-201ENST00000284637 NDUFS6O75380 124 aaKnown RBP14.33□□□□□ -0.12
SH3RF1-201ENST00000284637 ABCA3Q99758 1704 aa14.32□□□□□ -0.12
SH3RF1-201ENST00000284637 F5H697 171 aa14.32□□□□□ -0.12
SH3RF1-201ENST00000284637 RHBDL1O75783 438 aa14.32□□□□□ -0.12
SH3RF1-201ENST00000284637 MT-CO3P00414 261 aa14.32□□□□□ -0.12
SH3RF1-201ENST00000284637 STAG3L2P0CL84 134 aa14.32□□□□□ -0.12
SH3RF1-201ENST00000284637 PPP1CCP36873 323 aaKnown RBP14.32□□□□□ -0.12
SH3RF1-201ENST00000284637 MAGEA5P43359 124 aa14.32□□□□□ -0.12
SH3RF1-201ENST00000284637 ERVFRD-1P60508 538 aa14.32□□□□□ -0.12
SH3RF1-201ENST00000284637 SERF2P84101 59 aa14.32□□□□□ -0.12
SH3RF1-201ENST00000284637 TMEM252Q8N6L7 170 aa14.32□□□□□ -0.12
SH3RF1-201ENST00000284637 DXOO77932 396 aaKnown RBP14.32□□□□□ -0.12
SH3RF1-201ENST00000284637 HIKESHIQ53FT3 197 aa14.32□□□□□ -0.12
SH3RF1-201ENST00000284637 DEFB123Q8N688 67 aa14.32□□□□□ -0.12
SH3RF1-201ENST00000284637 FLYWCH2Q96CP2 140 aaKnown RBP14.32□□□□□ -0.12
SH3RF1-201ENST00000284637 P2RX4Q99571 388 aa14.32□□□□□ -0.12
SH3RF1-201ENST00000284637 RTTNQ86VV8 2226 aa14.32□□□□□ -0.12
SH3RF1-201ENST00000284637 C5orf52A6NGY3 159 aa14.32□□□□□ -0.12
SH3RF1-201ENST00000284637 UPK3AO75631 287 aa14.32□□□□□ -0.12
SH3RF1-201ENST00000284637 GMPPAQ96IJ6 420 aaPredicted RBP14.32□□□□□ -0.12
SH3RF1-201ENST00000284637 ADTRPQ96IZ2 230 aa14.32□□□□□ -0.12
SH3RF1-201ENST00000284637 TMPRSS2O15393 492 aa14.32□□□□□ -0.12
SH3RF1-201ENST00000284637 CTAG1AP78358 180 aa14.32□□□□□ -0.12
SH3RF1-201ENST00000284637 ZNF343Q6P1L6 599 aa14.32□□□□□ -0.12
SH3RF1-201ENST00000284637 DHRS7CA6NNS2 312 aa14.31□□□□□ -0.12
SH3RF1-201ENST00000284637 FSTP19883 344 aa14.31□□□□□ -0.12
SH3RF1-201ENST00000284637 EIF3IQ13347 325 aaKnown RBP14.31□□□□□ -0.12
SH3RF1-201ENST00000284637 IFITM10A6NMD0 228 aa14.31□□□□□ -0.12
SH3RF1-201ENST00000284637 P01737 135 aa14.31□□□□□ -0.12
SH3RF1-201ENST00000284637 COL8A1P27658 744 aa14.31□□□□□ -0.12
SH3RF1-201ENST00000284637 P2RY4P51582 365 aa14.31□□□□□ -0.12
SH3RF1-201ENST00000284637 RBM11P57052 281 aaKnown RBP14.31□□□□□ -0.12
SH3RF1-201ENST00000284637 ANKRD55Q3KP44 614 aa14.31□□□□□ -0.12
SH3RF1-201ENST00000284637 C5orf17Q8NAS9 161 aa14.31□□□□□ -0.12
SH3RF1-201ENST00000284637 OR4A4PQ8NGN8 299 aa14.31□□□□□ -0.12
SH3RF1-201ENST00000284637 COL4A1P02462 1669 aa14.31□□□□□ -0.12
SH3RF1-201ENST00000284637 MT-ND6P03923 174 aa14.31□□□□□ -0.12
SH3RF1-201ENST00000284637 AESQ08117 197 aa14.31□□□□□ -0.12
SH3RF1-201ENST00000284637 OR5A2Q8NGI9 324 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms