RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 FGF20Q9NP95 211 aaPredicted RBP6.95□□□□□ -1.3
TPM3-201ENST00000271850 CLEC2DQ9UHP7 191 aa6.95□□□□□ -1.3
TPM3-201ENST00000271850 ZNF107Q9UII5 783 aaPredicted RBP6.95□□□□□ -1.3
TPM3-201ENST00000271850 ZNF580Q9UK33 172 aa6.95□□□□□ -1.3
TPM3-201ENST00000271850 ING4Q9UNL4 249 aa6.95□□□□□ -1.3
TPM3-201ENST00000271850 FBXO7Q9Y3I1 522 aa6.95□□□□□ -1.3
TPM3-201ENST00000271850 SORL1Q92673 2214 aa6.95□□□□□ -1.3
TPM3-201ENST00000271850 PLECQ15149 4684 aaKnown RBP6.94□□□□□ -1.3
TPM3-201ENST00000271850 IGHV7-81A0A0B4J1V7 117 aa6.94□□□□□ -1.3
TPM3-201ENST00000271850 SEC14L6B5MCN3 397 aa6.94□□□□□ -1.3
TPM3-201ENST00000271850 OGG1O15527 345 aa6.94□□□□□ -1.3
TPM3-201ENST00000271850 ORC5O43913 435 aa6.94□□□□□ -1.3
TPM3-201ENST00000271850 SOX15O60248 233 aa6.94□□□□□ -1.3
TPM3-201ENST00000271850 MPZL2O60487 215 aa6.94□□□□□ -1.3
TPM3-201ENST00000271850 FADS2O95864 444 aaKnown RBP6.94□□□□□ -1.3
TPM3-201ENST00000271850 NHLRC4P0CG21 123 aaPredicted RBP6.94□□□□□ -1.3
TPM3-201ENST00000271850 SLC2A2P11168 524 aaPredicted RBP6.94□□□□□ -1.3
TPM3-201ENST00000271850 RCC1P18754 421 aaPredicted RBP6.94□□□□□ -1.3
TPM3-201ENST00000271850 GZMHP20718 246 aa6.94□□□□□ -1.3
TPM3-201ENST00000271850 GBX2P52951 348 aaPredicted RBP6.94□□□□□ -1.3
TPM3-201ENST00000271850 LSAMPQ13449 338 aa6.94□□□□□ -1.3
TPM3-201ENST00000271850 MPV17LQ2QL34 196 aa6.94□□□□□ -1.3
TPM3-201ENST00000271850 CXorf66Q5JRM2 361 aaPredicted RBP6.94□□□□□ -1.3
TPM3-201ENST00000271850 C6orf141Q5SZD1 244 aa6.94□□□□□ -1.3
TPM3-201ENST00000271850 SYT6Q5T7P8 510 aaPredicted RBP6.94□□□□□ -1.3
TPM3-201ENST00000271850 C9orf66Q5T8R8 295 aa6.94□□□□□ -1.3
TPM3-201ENST00000271850 UNQ9370/PRO34162Q6UXP9 181 aa6.94□□□□□ -1.3
TPM3-201ENST00000271850 SBSPONQ8IVN8 264 aa6.94□□□□□ -1.3
TPM3-201ENST00000271850 ZNF491Q8N8L2 437 aa6.94□□□□□ -1.3
TPM3-201ENST00000271850 ZFP41Q8N8Y5 198 aa6.94□□□□□ -1.3
TPM3-201ENST00000271850 OR11H1Q8NG94 326 aa6.94□□□□□ -1.3
TPM3-201ENST00000271850 OR5M8Q8NGP6 311 aa6.94□□□□□ -1.3
TPM3-201ENST00000271850 OR4K15Q8NH41 348 aa6.94□□□□□ -1.3
TPM3-201ENST00000271850 GPR148Q8TDV2 347 aa6.94□□□□□ -1.3
TPM3-201ENST00000271850 ZNF184Q99676 751 aaPredicted RBP6.94□□□□□ -1.3
TPM3-201ENST00000271850 ALX4Q9H161 411 aaPredicted RBP6.94□□□□□ -1.3
TPM3-201ENST00000271850 METTL9Q9H1A3 318 aa6.94□□□□□ -1.3
TPM3-201ENST00000271850 TMEM138Q9NPI0 162 aa6.94□□□□□ -1.3
TPM3-201ENST00000271850 FAM118AQ9NWS6 357 aa6.94□□□□□ -1.3
TPM3-201ENST00000271850 TRBV5-7A0A0A0MS05 114 aa6.93□□□□□ -1.3
TPM3-201ENST00000271850 LOC100130705A0A1B0GUX0 176 aa6.93□□□□□ -1.3
TPM3-201ENST00000271850 FAM90A10PA6NDY2 464 aa6.93□□□□□ -1.3
TPM3-201ENST00000271850 AIPO00170 330 aa6.93□□□□□ -1.3
TPM3-201ENST00000271850 ATP6V0E1O15342 81 aa6.93□□□□□ -1.3
TPM3-201ENST00000271850 GPX5O75715 221 aa6.93□□□□□ -1.3
TPM3-201ENST00000271850 SC5DO75845 299 aa6.93□□□□□ -1.3
TPM3-201ENST00000271850 HBZP02008 142 aa6.93□□□□□ -1.3
TPM3-201ENST00000271850 MYF6P23409 242 aa6.93□□□□□ -1.3
TPM3-201ENST00000271850 CHATP28329 748 aa6.93□□□□□ -1.3
TPM3-201ENST00000271850 BDKRB2P30411 391 aa6.93□□□□□ -1.3
TPM3-201ENST00000271850 MRPL28Q13084 256 aaKnown RBP6.93□□□□□ -1.3
TPM3-201ENST00000271850 ZNF260Q3ZCT1 412 aa6.93□□□□□ -1.3
TPM3-201ENST00000271850 Q3ZCU0 254 aa6.93□□□□□ -1.3
TPM3-201ENST00000271850 SLC22A6Q4U2R8 563 aa6.93□□□□□ -1.3
TPM3-201ENST00000271850 ATAD3CQ5T2N8 411 aa6.93□□□□□ -1.3
TPM3-201ENST00000271850 DMKNQ6E0U4 476 aaPredicted RBP6.93□□□□□ -1.3
TPM3-201ENST00000271850 RPL22L1Q6P5R6 122 aaKnown RBP6.93□□□□□ -1.3
TPM3-201ENST00000271850 LINC00596Q86U02 117 aa6.93□□□□□ -1.3
TPM3-201ENST00000271850 OR52L2PQ8NGH6 319 aa6.93□□□□□ -1.3
TPM3-201ENST00000271850 MUL1Q969V5 352 aa6.93□□□□□ -1.3
TPM3-201ENST00000271850 SMIM19Q96E16 107 aa6.93□□□□□ -1.3
TPM3-201ENST00000271850 OR5B12Q96R08 314 aa6.93□□□□□ -1.3
TPM3-201ENST00000271850 MRPL20Q9BYC9 149 aaKnown RBP6.93□□□□□ -1.3
TPM3-201ENST00000271850 MBNL3Q9NUK0 354 aaKnown RBP6.93□□□□□ -1.3
TPM3-201ENST00000271850 ZNF256Q9Y2P7 627 aaPredicted RBP6.93□□□□□ -1.3
TPM3-201ENST00000271850 WSB1Q9Y6I7 421 aa6.93□□□□□ -1.3
TPM3-201ENST00000271850 A0A1W2PPK0 400 aa6.92□□□□□ -1.3
TPM3-201ENST00000271850 SNTNA6NMZ2 147 aa6.92□□□□□ -1.3
TPM3-201ENST00000271850 MAGEB3O15480 346 aa6.92□□□□□ -1.3
TPM3-201ENST00000271850 LANCL1O43813 399 aa6.92□□□□□ -1.3
TPM3-201ENST00000271850 ATP5HO75947 161 aa6.92□□□□□ -1.3
TPM3-201ENST00000271850 EGR2P11161 476 aaPredicted RBP6.92□□□□□ -1.3
TPM3-201ENST00000271850 SOX6P35712 828 aa6.92□□□□□ -1.3
TPM3-201ENST00000271850 OR3A3P47888 321 aa6.92□□□□□ -1.3
TPM3-201ENST00000271850 RUNX1Q01196 453 aa6.92□□□□□ -1.3
TPM3-201ENST00000271850 RIPK1Q13546 671 aa6.92□□□□□ -1.3
TPM3-201ENST00000271850 CCDC58Q4VC31 144 aa6.92□□□□□ -1.3
TPM3-201ENST00000271850 MORN2Q502X0 79 aa6.92□□□□□ -1.3
TPM3-201ENST00000271850 CASC10Q5T4H9 136 aa6.92□□□□□ -1.3
TPM3-201ENST00000271850 LAIR2Q6ISS4 152 aa6.92□□□□□ -1.3
TPM3-201ENST00000271850 GLIPR1L1Q6UWM5 242 aa6.92□□□□□ -1.3
TPM3-201ENST00000271850 PRR18Q8N4B5 295 aa6.92□□□□□ -1.3
TPM3-201ENST00000271850 MINDY2Q8NBR6 621 aa6.92□□□□□ -1.3
TPM3-201ENST00000271850 MRPL30Q8TCC3 161 aaKnown RBP6.92□□□□□ -1.3
TPM3-201ENST00000271850 CASTOR1Q8WTX7 329 aa6.92□□□□□ -1.3
TPM3-201ENST00000271850 GHSRQ92847 366 aa6.92□□□□□ -1.3
TPM3-201ENST00000271850 CPNE2Q96FN4 548 aaPredicted RBP6.92□□□□□ -1.3
TPM3-201ENST00000271850 RDH12Q96NR8 316 aa6.92□□□□□ -1.3
TPM3-201ENST00000271850 RASL11BQ9BPW5 248 aa6.92□□□□□ -1.3
TPM3-201ENST00000271850 NABP2Q9BQ15 211 aa6.92□□□□□ -1.3
TPM3-201ENST00000271850 ZNF251Q9BRH9 671 aa6.92□□□□□ -1.3
TPM3-201ENST00000271850 ANKRD60Q9BZ19 345 aa6.92□□□□□ -1.3
TPM3-201ENST00000271850 BANF2Q9H503 90 aa6.92□□□□□ -1.3
TPM3-201ENST00000271850 RPL36Q9Y3U8 105 aaKnown RBP6.92□□□□□ -1.3
TPM3-201ENST00000271850 ORC6Q9Y5N6 252 aa6.92□□□□□ -1.3
TPM3-201ENST00000271850 C3orf84H3BNL1 204 aa6.91□□□□□ -1.3
TPM3-201ENST00000271850 DYNC1I1O14576 645 aa6.91□□□□□ -1.3
TPM3-201ENST00000271850 CIB2O75838 187 aa6.91□□□□□ -1.3
TPM3-201ENST00000271850 NDUFA3O95167 84 aa6.91□□□□□ -1.3
TPM3-201ENST00000271850 HLA-DRB1P01911 266 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms