RNA–Protein interactions for RNA: ENST00000270066.10

SMG9-201, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG9, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-201ENST00000270066 ASCL3Q9NQ33 180 aa11.52□□□□□ -0.57
SMG9-201ENST00000270066 IL17BQ9UHF5 180 aa11.52□□□□□ -0.57
SMG9-201ENST00000270066 ZNF716A6NP11 495 aa11.52□□□□□ -0.57
SMG9-201ENST00000270066 CRHP06850 196 aa11.52□□□□□ -0.57
SMG9-201ENST00000270066 KLF9Q13886 244 aaPredicted RBP11.52□□□□□ -0.57
SMG9-201ENST00000270066 WDR31Q8NA23 367 aa11.52□□□□□ -0.57
SMG9-201ENST00000270066 POMT1Q9Y6A1 747 aa11.52□□□□□ -0.57
SMG9-201ENST00000270066 FAM90A10PA6NDY2 464 aa11.51□□□□□ -0.57
SMG9-201ENST00000270066 FAM90A18PA6NE21 464 aa11.51□□□□□ -0.57
SMG9-201ENST00000270066 FAM90A16PA6NEW6 464 aa11.51□□□□□ -0.57
SMG9-201ENST00000270066 FAM90A20PA6NIJ5 464 aa11.51□□□□□ -0.57
SMG9-201ENST00000270066 FAM90A8PA6NJQ4 464 aa11.51□□□□□ -0.57
SMG9-201ENST00000270066 FAM90A7PA6NKC0 464 aa11.51□□□□□ -0.57
SMG9-201ENST00000270066 FAM90A22PA8MWA6 464 aa11.51□□□□□ -0.57
SMG9-201ENST00000270066 FAM90A12PA8MX19 464 aa11.51□□□□□ -0.57
SMG9-201ENST00000270066 FAM90A5PA8MXJ8 464 aa11.51□□□□□ -0.57
SMG9-201ENST00000270066 FAM90A23PA8MXZ1 464 aa11.51□□□□□ -0.57
SMG9-201ENST00000270066 OR2J3O76001 311 aa11.51□□□□□ -0.57
SMG9-201ENST00000270066 CLDN14O95500 239 aa11.51□□□□□ -0.57
SMG9-201ENST00000270066 FAM90A15PP0C7V4 464 aa11.51□□□□□ -0.57
SMG9-201ENST00000270066 FAM90A13PP0C7W8 464 aa11.51□□□□□ -0.57
SMG9-201ENST00000270066 FAM90A14PP0C7W9 464 aa11.51□□□□□ -0.57
SMG9-201ENST00000270066 FAM90A24PP0C7X0 464 aa11.51□□□□□ -0.57
SMG9-201ENST00000270066 CEBPEQ15744 281 aa11.51□□□□□ -0.57
SMG9-201ENST00000270066 ZNF658BQ4V348 819 aaPredicted RBP11.51□□□□□ -0.57
SMG9-201ENST00000270066 PPP1R32Q7Z5V6 425 aa11.51□□□□□ -0.57
SMG9-201ENST00000270066 IGLV1-36A0A0B4J1U3 117 aa11.51□□□□□ -0.57
SMG9-201ENST00000270066 USF1P22415 310 aaPredicted RBP11.51□□□□□ -0.57
SMG9-201ENST00000270066 LTBRP36941 435 aa11.51□□□□□ -0.57
SMG9-201ENST00000270066 MRGPRFQ96AM1 343 aa11.51□□□□□ -0.57
SMG9-201ENST00000270066 NOL4LQ96MY1 436 aaPredicted RBP11.51□□□□□ -0.57
SMG9-201ENST00000270066 CCL13Q99616 98 aa11.51□□□□□ -0.57
SMG9-201ENST00000270066 LPAR2Q9HBW0 351 aa11.51□□□□□ -0.57
SMG9-201ENST00000270066 BRWD1Q9NSI6 2320 aa11.51□□□□□ -0.57
SMG9-201ENST00000270066 J3QR89 54 aa11.51□□□□□ -0.57
SMG9-201ENST00000270066 G6PCP35575 357 aa11.51□□□□□ -0.57
SMG9-201ENST00000270066 FGF8P55075 233 aaPredicted RBP11.51□□□□□ -0.57
SMG9-201ENST00000270066 GUCA2BQ16661 112 aa11.51□□□□□ -0.57
SMG9-201ENST00000270066 TMEM183BQ1AE95 376 aa11.51□□□□□ -0.57
SMG9-201ENST00000270066 ZCCHC14Q8WYQ9 949 aaKnown RBP11.51□□□□□ -0.57
SMG9-201ENST00000270066 ZNF488Q96MN9 340 aa11.51□□□□□ -0.57
SMG9-201ENST00000270066 RNF115Q9Y4L5 304 aa11.51□□□□□ -0.57
SMG9-201ENST00000270066 ARID2Q68CP9 1835 aa11.51□□□□□ -0.57
SMG9-201ENST00000270066 BRCA1P38398 1863 aaKnown RBP11.51□□□□□ -0.57
SMG9-201ENST00000270066 FCGR3AP08637 254 aa11.51□□□□□ -0.57
SMG9-201ENST00000270066 CEACAM1P13688 526 aa11.51□□□□□ -0.57
SMG9-201ENST00000270066 CXCL2P19875 107 aa11.51□□□□□ -0.57
SMG9-201ENST00000270066 SULT1A1P50225 295 aa11.51□□□□□ -0.57
SMG9-201ENST00000270066 RPEL1Q2QD12 228 aa11.51□□□□□ -0.57
SMG9-201ENST00000270066 DHRS7BQ6IAN0 325 aaPredicted RBP11.51□□□□□ -0.57
SMG9-201ENST00000270066 OR8G5Q8NG78 346 aa11.51□□□□□ -0.57
SMG9-201ENST00000270066 ITLN1Q8WWA0 313 aa11.51□□□□□ -0.57
SMG9-201ENST00000270066 PERPQ96FX8 193 aa11.51□□□□□ -0.57
SMG9-201ENST00000270066 CLEC5AQ9NY25 188 aa11.51□□□□□ -0.57
SMG9-201ENST00000270066 ELOVL5Q9NYP7 299 aa11.51□□□□□ -0.57
SMG9-201ENST00000270066 NAGKQ9UJ70 344 aa11.51□□□□□ -0.57
SMG9-201ENST00000270066 SCN3AQ9NY46 2000 aa11.5□□□□□ -0.57
SMG9-201ENST00000270066 F5H697 171 aa11.5□□□□□ -0.57
SMG9-201ENST00000270066 SNCGO76070 127 aa11.5□□□□□ -0.57
SMG9-201ENST00000270066 HPRT1P00492 218 aa11.5□□□□□ -0.57
SMG9-201ENST00000270066 ISG15P05161 165 aa11.5□□□□□ -0.57
SMG9-201ENST00000270066 DYRK2Q92630 601 aa11.5□□□□□ -0.57
SMG9-201ENST00000270066 PKIBQ9C010 78 aa11.5□□□□□ -0.57
SMG9-201ENST00000270066 LOC102724200A0A096LPH7 203 aaPredicted RBP11.5□□□□□ -0.57
SMG9-201ENST00000270066 GAPDHP04406 335 aaKnown RBP11.5□□□□□ -0.57
SMG9-201ENST00000270066 PPP1CCP36873 323 aaKnown RBP11.5□□□□□ -0.57
SMG9-201ENST00000270066 KCNMB1Q16558 191 aa11.5□□□□□ -0.57
SMG9-201ENST00000270066 MRPL24Q96A35 216 aaKnown RBP11.5□□□□□ -0.57
SMG9-201ENST00000270066 PIMREGQ9BSJ6 248 aa11.5□□□□□ -0.57
SMG9-201ENST00000270066 IGHMP01871 453 aa11.5□□□□□ -0.57
SMG9-201ENST00000270066 C1QCP02747 245 aa11.5□□□□□ -0.57
SMG9-201ENST00000270066 ATP1A1-AS1Q5TC04 95 aa11.5□□□□□ -0.57
SMG9-201ENST00000270066 FOXD3Q9UJU5 478 aaPredicted RBP11.5□□□□□ -0.57
SMG9-201ENST00000270066 TRBV5-5A0A0J9YX44 114 aa11.5□□□□□ -0.57
SMG9-201ENST00000270066 KIAA1324LA8MWY0 1029 aaPredicted RBP11.5□□□□□ -0.57
SMG9-201ENST00000270066 KCNAB3O43448 404 aa11.5□□□□□ -0.57
SMG9-201ENST00000270066 NUBP1P53384 320 aa11.5□□□□□ -0.57
SMG9-201ENST00000270066 OR1L6Q8NGR2 347 aa11.5□□□□□ -0.57
SMG9-201ENST00000270066 OR51B2Q9Y5P1 312 aa11.5□□□□□ -0.57
SMG9-201ENST00000270066 TRAV39A0A0B4J263 110 aa11.49□□□□□ -0.57
SMG9-201ENST00000270066 CTSBP07858 339 aa11.49□□□□□ -0.57
SMG9-201ENST00000270066 ACAA1P09110 424 aaPredicted RBP11.49□□□□□ -0.57
SMG9-201ENST00000270066 PSG2P11465 335 aa11.49□□□□□ -0.57
SMG9-201ENST00000270066 STXBP6Q8NFX7 210 aa11.49□□□□□ -0.57
SMG9-201ENST00000270066 CFDP00746 253 aaPredicted RBP11.49□□□□□ -0.57
SMG9-201ENST00000270066 NMBP08949 121 aa11.49□□□□□ -0.57
SMG9-201ENST00000270066 NPY1RP25929 384 aa11.49□□□□□ -0.57
SMG9-201ENST00000270066 MC5RP33032 325 aa11.49□□□□□ -0.57
SMG9-201ENST00000270066 EFNB2P52799 333 aa11.49□□□□□ -0.57
SMG9-201ENST00000270066 ZNF154Q13106 437 aa11.49□□□□□ -0.57
SMG9-201ENST00000270066 RSPO4Q2I0M5 234 aaPredicted RBP11.49□□□□□ -0.57
SMG9-201ENST00000270066 ELOVL1Q9BW60 279 aa11.49□□□□□ -0.57
SMG9-201ENST00000270066 SRXN1Q9BYN0 137 aa11.49□□□□□ -0.57
SMG9-201ENST00000270066 SIPA1L1O43166 1804 aa11.49□□□□□ -0.57
SMG9-201ENST00000270066 RBFOX3A6NFN3 312 aa11.49□□□□□ -0.57
SMG9-201ENST00000270066 IGKV3-11P04433 115 aa11.49□□□□□ -0.57
SMG9-201ENST00000270066 TMEM50BP56557 158 aa11.49□□□□□ -0.57
SMG9-201ENST00000270066 PAFAH1B2P68402 229 aa11.49□□□□□ -0.57
SMG9-201ENST00000270066 ECSCRQ19T08 205 aa11.49□□□□□ -0.57
SMG9-201ENST00000270066 C10orf113Q5VZT2 155 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms