RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 TMEM217Q8N7C4 229 aa18.37■□□□□ 0.53
SH2D3A-201ENST00000245908 CD300LFQ8TDQ1 290 aa18.37■□□□□ 0.53
SH2D3A-201ENST00000245908 RTL8AQ9BWD3 113 aa18.37■□□□□ 0.53
SH2D3A-201ENST00000245908 LRP5LA4QPB2 252 aa18.36■□□□□ 0.53
SH2D3A-201ENST00000245908 RBFOX3A6NFN3 312 aa18.36■□□□□ 0.53
SH2D3A-201ENST00000245908 ARGFXA6NJG6 315 aa18.36■□□□□ 0.53
SH2D3A-201ENST00000245908 SERPINE2P07093 398 aa18.36■□□□□ 0.53
SH2D3A-201ENST00000245908 PSG2P11465 335 aa18.36■□□□□ 0.53
SH2D3A-201ENST00000245908 SPATA46Q5T0L3 261 aa18.36■□□□□ 0.53
SH2D3A-201ENST00000245908 PNPLA5Q7Z6Z6 429 aaPredicted RBP18.36■□□□□ 0.53
SH2D3A-201ENST00000245908 OR51H1Q8NH63 302 aa18.36■□□□□ 0.53
SH2D3A-201ENST00000245908 OR1A1Q9P1Q5 309 aa18.36■□□□□ 0.53
SH2D3A-201ENST00000245908 KIAA1456Q9P272 454 aa18.36■□□□□ 0.53
SH2D3A-201ENST00000245908 KIAA1324LA8MWY0 1029 aaPredicted RBP18.35■□□□□ 0.53
SH2D3A-201ENST00000245908 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP18.35■□□□□ 0.53
SH2D3A-201ENST00000245908 J3QW42 95 aa18.35■□□□□ 0.53
SH2D3A-201ENST00000245908 DAOP14920 347 aa18.35■□□□□ 0.53
SH2D3A-201ENST00000245908 FIP1L1Q6UN15 594 aaKnown RBP18.35■□□□□ 0.53
SH2D3A-201ENST00000245908 ZNF295-AS1Q8N0V1 137 aa18.35■□□□□ 0.53
SH2D3A-201ENST00000245908 DEFB127Q9H1M4 99 aa18.35■□□□□ 0.53
SH2D3A-201ENST00000245908 SLC33A1O00400 549 aaPredicted RBP18.35■□□□□ 0.53
SH2D3A-201ENST00000245908 SP9P0CG40 484 aa18.35■□□□□ 0.53
SH2D3A-201ENST00000245908 CD46P15529 392 aa18.35■□□□□ 0.53
SH2D3A-201ENST00000245908 IGFBP7Q16270 282 aa18.35■□□□□ 0.53
SH2D3A-201ENST00000245908 TBC1D28Q2M2D7 210 aa18.35■□□□□ 0.53
SH2D3A-201ENST00000245908 SOHLH1Q5JUK2 328 aa18.35■□□□□ 0.53
SH2D3A-201ENST00000245908 WDR86Q86TI4 376 aa18.35■□□□□ 0.53
SH2D3A-201ENST00000245908 DEFB123Q8N688 67 aa18.35■□□□□ 0.53
SH2D3A-201ENST00000245908 YPEL4Q96NS1 127 aa18.35■□□□□ 0.53
SH2D3A-201ENST00000245908 S100A2P29034 98 aa18.34■□□□□ 0.53
SH2D3A-201ENST00000245908 RUNX1Q01196 453 aa18.34■□□□□ 0.53
SH2D3A-201ENST00000245908 Q8IYB0 196 aa18.34■□□□□ 0.53
SH2D3A-201ENST00000245908 ZNF383Q8NA42 475 aa18.34■□□□□ 0.53
SH2D3A-201ENST00000245908 IL1F10Q8WWZ1 152 aa18.34■□□□□ 0.53
SH2D3A-201ENST00000245908 HIPK2Q9H2X6 1198 aa18.34■□□□□ 0.53
SH2D3A-201ENST00000245908 SPRR3Q9UBC9 169 aa18.34■□□□□ 0.53
SH2D3A-201ENST00000245908 COL6A3P12111 3177 aa18.34■□□□□ 0.53
SH2D3A-201ENST00000245908 IGLV2-14P01704 120 aa18.34■□□□□ 0.53
SH2D3A-201ENST00000245908 ERVK11-1P61568 191 aa18.34■□□□□ 0.53
SH2D3A-201ENST00000245908 RPL23AP62750 156 aaKnown RBP18.34■□□□□ 0.53
SH2D3A-201ENST00000245908 TESK1Q15569 626 aa18.34■□□□□ 0.53
SH2D3A-201ENST00000245908 PLA2G2CQ5R387 149 aa18.34■□□□□ 0.53
SH2D3A-201ENST00000245908 ZNF497Q6ZNH5 498 aa18.34■□□□□ 0.53
SH2D3A-201ENST00000245908 STX12Q86Y82 276 aa18.34■□□□□ 0.53
SH2D3A-201ENST00000245908 LSM10Q969L4 123 aaKnown RBP18.34■□□□□ 0.53
SH2D3A-201ENST00000245908 RAB40CQ96S21 281 aa18.34■□□□□ 0.53
SH2D3A-201ENST00000245908 TRGV5A0A0B4J1U4 118 aa18.33■□□□□ 0.53
SH2D3A-201ENST00000245908 IFITM10A6NMD0 228 aa18.33■□□□□ 0.53
SH2D3A-201ENST00000245908 CDX4O14627 284 aaPredicted RBP18.33■□□□□ 0.53
SH2D3A-201ENST00000245908 DFFBO76075 338 aa18.33■□□□□ 0.53
SH2D3A-201ENST00000245908 ARG1P05089 322 aa18.33■□□□□ 0.53
SH2D3A-201ENST00000245908 TAS2R30P59541 319 aa18.33■□□□□ 0.53
SH2D3A-201ENST00000245908 DNLZQ5SXM8 178 aa18.33■□□□□ 0.53
SH2D3A-201ENST00000245908 AKR1C8PQ5T2L2 129 aa18.33■□□□□ 0.53
SH2D3A-201ENST00000245908 DPPA3Q6W0C5 159 aa18.33■□□□□ 0.53
SH2D3A-201ENST00000245908 HEPN1Q6WQI6 88 aa18.33■□□□□ 0.53
SH2D3A-201ENST00000245908 C14orf144Q96I85 54 aa18.33■□□□□ 0.53
SH2D3A-201ENST00000245908 DOCK7Q96N67 2140 aa18.33■□□□□ 0.52
SH2D3A-201ENST00000245908 OR2H2O95918 312 aa18.33■□□□□ 0.52
SH2D3A-201ENST00000245908 IGKV1-39P01597 117 aa18.33■□□□□ 0.52
SH2D3A-201ENST00000245908 IGKV1D-39P04432 117 aa18.33■□□□□ 0.52
SH2D3A-201ENST00000245908 KIAA0141Q14154 515 aaPredicted RBP18.33■□□□□ 0.52
SH2D3A-201ENST00000245908 SCCPDHQ8NBX0 429 aa18.33■□□□□ 0.52
SH2D3A-201ENST00000245908 GFOD1Q9NXC2 390 aa18.33■□□□□ 0.52
SH2D3A-201ENST00000245908 GAR1Q9NY12 217 aaKnown RBP18.33■□□□□ 0.52
SH2D3A-201ENST00000245908 POLDIP2Q9Y2S7 368 aa18.33■□□□□ 0.52
SH2D3A-201ENST00000245908 MED12LQ86YW9 2145 aa18.32■□□□□ 0.52
SH2D3A-201ENST00000245908 A0A1W2PPE2 198 aa18.32■□□□□ 0.52
SH2D3A-201ENST00000245908 A0A1W2PR80 420 aa18.32■□□□□ 0.52
SH2D3A-201ENST00000245908 SIRPB1O00241 398 aa18.32■□□□□ 0.52
SH2D3A-201ENST00000245908 SMPD2O60906 423 aa18.32■□□□□ 0.52
SH2D3A-201ENST00000245908 YIF1AO95070 293 aa18.32■□□□□ 0.52
SH2D3A-201ENST00000245908 TNFSF15O95150 251 aa18.32■□□□□ 0.52
SH2D3A-201ENST00000245908 ZNF124Q15973 351 aa18.32■□□□□ 0.52
SH2D3A-201ENST00000245908 MYPOPQ86VE0 399 aaPredicted RBP18.32■□□□□ 0.52
SH2D3A-201ENST00000245908 LOXL4Q96JB6 756 aa18.32■□□□□ 0.52
SH2D3A-201ENST00000245908 UNKLQ9H9P5 680 aaKnown RBP18.32■□□□□ 0.52
SH2D3A-201ENST00000245908 LY86O95711 162 aa18.32■□□□□ 0.52
SH2D3A-201ENST00000245908 RNFT1Q5M7Z0 435 aa18.32■□□□□ 0.52
SH2D3A-201ENST00000245908 Q6ZRM9 215 aa18.32■□□□□ 0.52
SH2D3A-201ENST00000245908 RNASE11Q8TAA1 199 aaKnown RBP18.32■□□□□ 0.52
SH2D3A-201ENST00000245908 WSB1Q9Y6I7 421 aa18.32■□□□□ 0.52
SH2D3A-201ENST00000245908 TRAV39A0A0B4J263 110 aa18.31■□□□□ 0.52
SH2D3A-201ENST00000245908 CNOT4O95628 575 aaKnown RBP18.31■□□□□ 0.52
SH2D3A-201ENST00000245908 SRP19P09132 144 aaKnown RBP18.31■□□□□ 0.52
SH2D3A-201ENST00000245908 RNF224P0DH78 156 aa18.31■□□□□ 0.52
SH2D3A-201ENST00000245908 DHRS13Q6UX07 377 aa18.31■□□□□ 0.52
SH2D3A-201ENST00000245908 SSX9Q7RTT3 188 aa18.31■□□□□ 0.52
SH2D3A-201ENST00000245908 PRDM13Q9H4Q3 707 aa18.31■□□□□ 0.52
SH2D3A-201ENST00000245908 CELA3BP08861 270 aa18.3■□□□□ 0.52
SH2D3A-201ENST00000245908 PPP1CBP62140 327 aa18.3■□□□□ 0.52
SH2D3A-201ENST00000245908 TLE4Q04727 773 aa18.3■□□□□ 0.52
SH2D3A-201ENST00000245908 ZNF506Q5JVG8 444 aa18.3■□□□□ 0.52
SH2D3A-201ENST00000245908 VASH2Q86V25 355 aa18.3■□□□□ 0.52
SH2D3A-201ENST00000245908 CACNG5Q9UF02 275 aa18.3■□□□□ 0.52
SH2D3A-201ENST00000245908 TRAPPC2LQ9UL33 140 aa18.3■□□□□ 0.52
SH2D3A-201ENST00000245908 PUS1Q9Y606 427 aaKnown RBP eCLIP18.3■□□□□ 0.52
SH2D3A-201ENST00000245908 R4GN57 208 aa18.3■□□□□ 0.52
SH2D3A-201ENST00000245908 H3BP45 60 aa18.3■□□□□ 0.52
SH2D3A-201ENST00000245908 HBE1P02100 147 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms