RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 ICE1Q9Y2F5 2266 aa11.16□□□□□ -0.62
CTNS-201ENST00000046640 CDIPTO14735 213 aa11.16□□□□□ -0.62
CTNS-201ENST00000046640 SLC34A2O95436 690 aa11.16□□□□□ -0.62
CTNS-201ENST00000046640 CEBPDP49716 269 aaPredicted RBP11.16□□□□□ -0.62
CTNS-201ENST00000046640 TMEM267Q0VDI3 215 aaPredicted RBP11.16□□□□□ -0.62
CTNS-201ENST00000046640 GFI1BQ5VTD9 330 aa11.16□□□□□ -0.62
CTNS-201ENST00000046640 SPSB3Q6PJ21 355 aa11.16□□□□□ -0.62
CTNS-201ENST00000046640 KMT2EQ8IZD2 1858 aa11.16□□□□□ -0.62
CTNS-201ENST00000046640 GGACTQ9BVM4 153 aa11.16□□□□□ -0.62
CTNS-201ENST00000046640 FAM86C1Q9NVL1 165 aa11.16□□□□□ -0.62
CTNS-201ENST00000046640 CYB5BO43169 146 aa11.15□□□□□ -0.62
CTNS-201ENST00000046640 GNG3P63215 75 aa11.15□□□□□ -0.62
CTNS-201ENST00000046640 Q8WTZ3 238 aa11.15□□□□□ -0.62
CTNS-201ENST00000046640 PFDN5Q99471 154 aa11.15□□□□□ -0.62
CTNS-201ENST00000046640 TMEM222Q9H0R3 208 aa11.15□□□□□ -0.62
CTNS-201ENST00000046640 OR1A1Q9P1Q5 309 aa11.15□□□□□ -0.62
CTNS-201ENST00000046640 ERRFI1Q9UJM3 462 aaPredicted RBP11.15□□□□□ -0.62
CTNS-201ENST00000046640 CHD3Q12873 2000 aaKnown RBP11.15□□□□□ -0.62
CTNS-201ENST00000046640 TNRC6AQ8NDV7 1962 aaKnown RBP11.15□□□□□ -0.62
CTNS-201ENST00000046640 DCHS1Q96JQ0 3298 aa11.15□□□□□ -0.62
CTNS-201ENST00000046640 ZFP92A6NM28 416 aa11.15□□□□□ -0.62
CTNS-201ENST00000046640 COX5BP10606 129 aa11.15□□□□□ -0.62
CTNS-201ENST00000046640 IGHV1-2P23083 117 aa11.15□□□□□ -0.62
CTNS-201ENST00000046640 TNFSF10P50591 281 aa11.15□□□□□ -0.62
CTNS-201ENST00000046640 RAB5CP51148 216 aa11.15□□□□□ -0.62
CTNS-201ENST00000046640 FGF8P55075 233 aaPredicted RBP11.15□□□□□ -0.62
CTNS-201ENST00000046640 RAB2AP61019 212 aa11.15□□□□□ -0.62
CTNS-201ENST00000046640 RPL23AP62750 156 aaKnown RBP11.15□□□□□ -0.62
CTNS-201ENST00000046640 ZNF266Q14584 549 aa11.15□□□□□ -0.62
CTNS-201ENST00000046640 AKR1C8PQ5T2L2 129 aa11.15□□□□□ -0.62
CTNS-201ENST00000046640 HEPN1Q6WQI6 88 aa11.15□□□□□ -0.62
CTNS-201ENST00000046640 SPNS3Q6ZMD2 512 aa11.15□□□□□ -0.62
CTNS-201ENST00000046640 WDR86Q86TI4 376 aa11.15□□□□□ -0.62
CTNS-201ENST00000046640 THNSL2Q86YJ6 484 aa11.15□□□□□ -0.62
CTNS-201ENST00000046640 SELENOHQ8IZQ5 122 aaKnown RBP11.15□□□□□ -0.62
CTNS-201ENST00000046640 RNASE11Q8TAA1 199 aaKnown RBP11.15□□□□□ -0.62
CTNS-201ENST00000046640 TOLLIPQ9H0E2 274 aa11.15□□□□□ -0.62
CTNS-201ENST00000046640 TUBA4BQ9H853 241 aa11.15□□□□□ -0.62
CTNS-201ENST00000046640 GNG13Q9P2W3 67 aa11.15□□□□□ -0.62
CTNS-201ENST00000046640 OR14J1Q9UGF5 321 aa11.15□□□□□ -0.62
CTNS-201ENST00000046640 DEGS1O15121 323 aa11.14□□□□□ -0.63
CTNS-201ENST00000046640 SS18L1O75177 396 aaPredicted RBP11.14□□□□□ -0.63
CTNS-201ENST00000046640 UCP2P55851 309 aa11.14□□□□□ -0.63
CTNS-201ENST00000046640 ERVFRD-1P60508 538 aa11.14□□□□□ -0.63
CTNS-201ENST00000046640 UBE2NP61088 152 aaKnown RBP11.14□□□□□ -0.63
CTNS-201ENST00000046640 ZNF573Q86YE8 665 aa11.14□□□□□ -0.63
CTNS-201ENST00000046640 LRTM2Q8N967 370 aa11.14□□□□□ -0.63
CTNS-201ENST00000046640 TMEM178AQ8NBL3 297 aa11.14□□□□□ -0.63
CTNS-201ENST00000046640 MRPL30Q8TCC3 161 aaKnown RBP11.14□□□□□ -0.63
CTNS-201ENST00000046640 PLEKHF2Q9H8W4 249 aa11.14□□□□□ -0.63
CTNS-201ENST00000046640 DLL3Q9NYJ7 618 aa11.14□□□□□ -0.63
CTNS-201ENST00000046640 DOCK11Q5JSL3 2073 aa11.14□□□□□ -0.63
CTNS-201ENST00000046640 HSPA12AO43301 675 aa11.14□□□□□ -0.63
CTNS-201ENST00000046640 ZNF16P17020 682 aaPredicted RBP11.14□□□□□ -0.63
CTNS-201ENST00000046640 TBC1D28Q2M2D7 210 aa11.14□□□□□ -0.63
CTNS-201ENST00000046640 MPV17LQ2QL34 196 aa11.14□□□□□ -0.63
CTNS-201ENST00000046640 LCN15Q6UWW0 184 aa11.14□□□□□ -0.63
CTNS-201ENST00000046640 CMTM1Q8IZ96 169 aa11.14□□□□□ -0.63
CTNS-201ENST00000046640 DOK5Q9P104 306 aa11.14□□□□□ -0.63
CTNS-201ENST00000046640 RBM7Q9Y580 266 aaKnown RBP11.14□□□□□ -0.63
CTNS-201ENST00000046640 WSB1Q9Y6I7 421 aa11.14□□□□□ -0.63
CTNS-201ENST00000046640 CADP27708 2225 aa11.14□□□□□ -0.63
CTNS-201ENST00000046640 PPIHO43447 177 aaKnown RBP11.14□□□□□ -0.63
CTNS-201ENST00000046640 SRP19P09132 144 aaKnown RBP11.14□□□□□ -0.63
CTNS-201ENST00000046640 UCP3P55916 312 aa11.14□□□□□ -0.63
CTNS-201ENST00000046640 FAM53AQ6NSI3 398 aaPredicted RBP11.14□□□□□ -0.63
CTNS-201ENST00000046640 ZNF826PQ6ZT77 177 aa11.14□□□□□ -0.63
CTNS-201ENST00000046640 Q8NFD4 153 aa11.14□□□□□ -0.63
CTNS-201ENST00000046640 MUCL1Q96DR8 90 aa11.14□□□□□ -0.63
CTNS-201ENST00000046640 RSG1Q9BU20 258 aa11.14□□□□□ -0.63
CTNS-201ENST00000046640 TMPRSS5Q9H3S3 457 aa11.14□□□□□ -0.63
CTNS-201ENST00000046640 PARD6AQ9NPB6 346 aa11.14□□□□□ -0.63
CTNS-201ENST00000046640 ATP23Q9Y6H3 246 aa11.14□□□□□ -0.63
CTNS-201ENST00000046640 IFITM10A6NMD0 228 aa11.13□□□□□ -0.63
CTNS-201ENST00000046640 ZNF729A6NN14 1252 aaPredicted RBP11.13□□□□□ -0.63
CTNS-201ENST00000046640 TRGC2P03986 189 aa11.13□□□□□ -0.63
CTNS-201ENST00000046640 IAPPP10997 89 aa11.13□□□□□ -0.63
CTNS-201ENST00000046640 PPP1CBP62140 327 aa11.13□□□□□ -0.63
CTNS-201ENST00000046640 RAB11AP62491 216 aa11.13□□□□□ -0.63
CTNS-201ENST00000046640 PYY3Q5JQD4 70 aa11.13□□□□□ -0.63
CTNS-201ENST00000046640 ODF3L1Q8IXM7 274 aa11.13□□□□□ -0.63
CTNS-201ENST00000046640 SCCPDHQ8NBX0 429 aa11.13□□□□□ -0.63
CTNS-201ENST00000046640 OR10D4PQ8NGN7 298 aa11.13□□□□□ -0.63
CTNS-201ENST00000046640 SLC25A40Q8TBP6 338 aa11.13□□□□□ -0.63
CTNS-201ENST00000046640 OR51I2Q9H344 312 aa11.13□□□□□ -0.63
CTNS-201ENST00000046640 CDH20Q9HBT6 801 aa11.13□□□□□ -0.63
CTNS-201ENST00000046640 PPP1R3CQ9UQK1 317 aa11.13□□□□□ -0.63
CTNS-201ENST00000046640 PTPRZ1P23471 2315 aaPredicted RBP11.13□□□□□ -0.63
CTNS-201ENST00000046640 A0A0G2JRQ6 117 aa11.13□□□□□ -0.63
CTNS-201ENST00000046640 FTH1P19P0C7X4 201 aa11.13□□□□□ -0.63
CTNS-201ENST00000046640 ICAM4Q14773 271 aa11.13□□□□□ -0.63
CTNS-201ENST00000046640 VWA1Q6PCB0 445 aa11.13□□□□□ -0.63
CTNS-201ENST00000046640 PCSK4Q6UW60 755 aa11.13□□□□□ -0.63
CTNS-201ENST00000046640 LFNGQ8NES3 379 aa11.13□□□□□ -0.63
CTNS-201ENST00000046640 OR10J5Q8NHC4 309 aa11.13□□□□□ -0.63
CTNS-201ENST00000046640 NANOS1Q8WY41 292 aaKnown RBP11.13□□□□□ -0.63
CTNS-201ENST00000046640 MPC1Q9Y5U8 109 aa11.13□□□□□ -0.63
CTNS-201ENST00000046640 KIR2DS1A0A191URI9 304 aa11.12□□□□□ -0.63
CTNS-201ENST00000046640 SCAF4O95104 1147 aaKnown RBP11.12□□□□□ -0.63
CTNS-201ENST00000046640 S100A2P29034 98 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms