RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 FAM71E2Q8N5Q1 922 aa11.96□□□□□ -0.49
RTFDC1-201ENST00000023939 ZCCHC14Q8WYQ9 949 aaKnown RBP11.96□□□□□ -0.49
RTFDC1-201ENST00000023939 RNASE6Q93091 150 aaKnown RBP11.96□□□□□ -0.49
RTFDC1-201ENST00000023939 ZNF471Q9BX82 626 aaPredicted RBP11.96□□□□□ -0.49
RTFDC1-201ENST00000023939 PLEKHA2Q9HB19 425 aa11.96□□□□□ -0.49
RTFDC1-201ENST00000023939 CYTL1Q9NRR1 136 aa11.96□□□□□ -0.49
RTFDC1-201ENST00000023939 NSG2Q9Y328 171 aa11.96□□□□□ -0.49
RTFDC1-201ENST00000023939 ODAMA1E959 279 aa11.95□□□□□ -0.5
RTFDC1-201ENST00000023939 LEUTXA8MZ59 168 aa11.95□□□□□ -0.5
RTFDC1-201ENST00000023939 F5H0A9 414 aaPredicted RBP11.95□□□□□ -0.5
RTFDC1-201ENST00000023939 ST8SIA3O43173 380 aa11.95□□□□□ -0.5
RTFDC1-201ENST00000023939 NMBP08949 121 aa11.95□□□□□ -0.5
RTFDC1-201ENST00000023939 SLC25A6P12236 298 aa11.95□□□□□ -0.5
RTFDC1-201ENST00000023939 TNFRSF1AP19438 455 aa11.95□□□□□ -0.5
RTFDC1-201ENST00000023939 FAM209AQ5JX71 171 aa11.95□□□□□ -0.5
RTFDC1-201ENST00000023939 TEX36Q5VZQ5 186 aa11.95□□□□□ -0.5
RTFDC1-201ENST00000023939 STUMQ69YW2 141 aa11.95□□□□□ -0.5
RTFDC1-201ENST00000023939 ZNF561Q8N587 486 aa11.95□□□□□ -0.5
RTFDC1-201ENST00000023939 OR13A1Q8NGR1 328 aa11.95□□□□□ -0.5
RTFDC1-201ENST00000023939 MRGPRDQ8TDS7 321 aa11.95□□□□□ -0.5
RTFDC1-201ENST00000023939 PARP12Q9H0J9 701 aaKnown RBP11.95□□□□□ -0.5
RTFDC1-201ENST00000023939 SLC25A32Q9H2D1 315 aa11.95□□□□□ -0.5
RTFDC1-201ENST00000023939 POMT1Q9Y6A1 747 aa11.95□□□□□ -0.5
RTFDC1-201ENST00000023939 MAP1BP46821 2468 aaKnown RBP11.95□□□□□ -0.5
RTFDC1-201ENST00000023939 NKX2-6A6NCS4 301 aa11.94□□□□□ -0.5
RTFDC1-201ENST00000023939 SHISA9B4DS77 424 aa11.94□□□□□ -0.5
RTFDC1-201ENST00000023939 CCL21O00585 134 aa11.94□□□□□ -0.5
RTFDC1-201ENST00000023939 SPINT2O43291 252 aa11.94□□□□□ -0.5
RTFDC1-201ENST00000023939 OR8U9P0C7N5 309 aa11.94□□□□□ -0.5
RTFDC1-201ENST00000023939 MUC1P15941 1255 aaPredicted RBP11.94□□□□□ -0.5
RTFDC1-201ENST00000023939 P2RX3P56373 397 aa11.94□□□□□ -0.5
RTFDC1-201ENST00000023939 DMRTC2Q8IXT2 367 aaPredicted RBP11.94□□□□□ -0.5
RTFDC1-201ENST00000023939 BOLLQ8N9W6 283 aaKnown RBP11.94□□□□□ -0.5
RTFDC1-201ENST00000023939 OR52M1Q8NGK5 317 aa11.94□□□□□ -0.5
RTFDC1-201ENST00000023939 OR8U1Q8NH10 309 aa11.94□□□□□ -0.5
RTFDC1-201ENST00000023939 FAM234AQ9H0X4 552 aa11.94□□□□□ -0.5
RTFDC1-201ENST00000023939 RP1L1Q8IWN7 2480 aaPredicted RBP11.94□□□□□ -0.5
RTFDC1-201ENST00000023939 TLN1Q9Y490 2541 aaKnown RBP11.94□□□□□ -0.5
RTFDC1-201ENST00000023939 IGHV3OR15-7A0A075B7D8 119 aa11.94□□□□□ -0.5
RTFDC1-201ENST00000023939 RNF212BA8MTL3 300 aa11.94□□□□□ -0.5
RTFDC1-201ENST00000023939 KCNAB3O43448 404 aa11.94□□□□□ -0.5
RTFDC1-201ENST00000023939 RRASP10301 218 aa11.94□□□□□ -0.5
RTFDC1-201ENST00000023939 EIF4EBP1Q13541 118 aaPredicted RBP11.94□□□□□ -0.5
RTFDC1-201ENST00000023939 GPR157Q5UAW9 335 aa11.94□□□□□ -0.5
RTFDC1-201ENST00000023939 ADAM5Q6NVV9 412 aa11.94□□□□□ -0.5
RTFDC1-201ENST00000023939 DRAM1Q8N682 238 aa11.94□□□□□ -0.5
RTFDC1-201ENST00000023939 ZNF645Q8N7E2 425 aa11.94□□□□□ -0.5
RTFDC1-201ENST00000023939 UBALD1Q8TB05 177 aa11.94□□□□□ -0.5
RTFDC1-201ENST00000023939 GPHA2Q96T91 129 aa11.94□□□□□ -0.5
RTFDC1-201ENST00000023939 LIN7CQ9NUP9 197 aaKnown RBP11.94□□□□□ -0.5
RTFDC1-201ENST00000023939 PPP1R3CQ9UQK1 317 aa11.94□□□□□ -0.5
RTFDC1-201ENST00000023939 LSM5Q9Y4Y9 91 aaKnown RBP11.94□□□□□ -0.5
RTFDC1-201ENST00000023939 RBM7Q9Y580 266 aaKnown RBP11.94□□□□□ -0.5
RTFDC1-201ENST00000023939 DMXL2Q8TDJ6 3036 aa11.93□□□□□ -0.5
RTFDC1-201ENST00000023939 POLEQ07864 2286 aa11.93□□□□□ -0.5
RTFDC1-201ENST00000023939 CACNA1AO00555 2505 aa11.93□□□□□ -0.5
RTFDC1-201ENST00000023939 TNFSF12O43508 249 aa11.93□□□□□ -0.5
RTFDC1-201ENST00000023939 SERPINE2P07093 398 aa11.93□□□□□ -0.5
RTFDC1-201ENST00000023939 CGB3P0DN86 165 aa11.93□□□□□ -0.5
RTFDC1-201ENST00000023939 CGB7P0DN87 165 aa11.93□□□□□ -0.5
RTFDC1-201ENST00000023939 TPT1P13693 172 aaKnown RBP11.93□□□□□ -0.5
RTFDC1-201ENST00000023939 IRF2P14316 349 aa11.93□□□□□ -0.5
RTFDC1-201ENST00000023939 RPL12P30050 165 aaKnown RBP11.93□□□□□ -0.5
RTFDC1-201ENST00000023939 CD80P33681 288 aa11.93□□□□□ -0.5
RTFDC1-201ENST00000023939 P2RY1P47900 373 aa11.93□□□□□ -0.5
RTFDC1-201ENST00000023939 EFNB3Q15768 340 aa11.93□□□□□ -0.5
RTFDC1-201ENST00000023939 OR52L2PQ8NGH6 319 aa11.93□□□□□ -0.5
RTFDC1-201ENST00000023939 NINJ1Q92982 152 aa11.93□□□□□ -0.5
RTFDC1-201ENST00000023939 LSM10Q969L4 123 aaKnown RBP11.93□□□□□ -0.5
RTFDC1-201ENST00000023939 ARL11Q969Q4 196 aa11.93□□□□□ -0.5
RTFDC1-201ENST00000023939 C11orf1Q9H5F2 150 aa11.93□□□□□ -0.5
RTFDC1-201ENST00000023939 PLEKHF2Q9H8W4 249 aa11.93□□□□□ -0.5
RTFDC1-201ENST00000023939 FAM212BQ9NTI7 297 aaPredicted RBP11.93□□□□□ -0.5
RTFDC1-201ENST00000023939 COQ3Q9NZJ6 369 aa11.93□□□□□ -0.5
RTFDC1-201ENST00000023939 OR6C3Q9NZP0 311 aa11.93□□□□□ -0.5
RTFDC1-201ENST00000023939 NDRG3Q9UGV2 375 aa11.93□□□□□ -0.5
RTFDC1-201ENST00000023939 IGF2RP11717 2491 aa11.93□□□□□ -0.5
RTFDC1-201ENST00000023939 MED19A0JLT2 244 aaPredicted RBP11.92□□□□□ -0.5
RTFDC1-201ENST00000023939 LRRC30A6NM36 301 aa11.92□□□□□ -0.5
RTFDC1-201ENST00000023939 F2RL2O00254 374 aa11.92□□□□□ -0.5
RTFDC1-201ENST00000023939 MMP9P14780 707 aa11.92□□□□□ -0.5
RTFDC1-201ENST00000023939 SSTR5P35346 364 aa11.92□□□□□ -0.5
RTFDC1-201ENST00000023939 EIF5AP63241 154 aaKnown RBP11.92□□□□□ -0.5
RTFDC1-201ENST00000023939 THOC7Q6I9Y2 204 aaKnown RBP11.92□□□□□ -0.5
RTFDC1-201ENST00000023939 ZNF788Q6ZQV5 615 aa11.92□□□□□ -0.5
RTFDC1-201ENST00000023939 FOXRED2Q8IWF2 684 aa11.92□□□□□ -0.5
RTFDC1-201ENST00000023939 BAP18Q8IXM2 172 aa11.92□□□□□ -0.5
RTFDC1-201ENST00000023939 TPRX1Q8N7U7 411 aa11.92□□□□□ -0.5
RTFDC1-201ENST00000023939 DMBX1Q8NFW5 382 aa11.92□□□□□ -0.5
RTFDC1-201ENST00000023939 OR51H1Q8NH63 302 aa11.92□□□□□ -0.5
RTFDC1-201ENST00000023939 C14orf79Q96F83 325 aa11.92□□□□□ -0.5
RTFDC1-201ENST00000023939 LRRC46Q96FV0 321 aa11.92□□□□□ -0.5
RTFDC1-201ENST00000023939 EGLN1Q9GZT9 426 aa11.92□□□□□ -0.5
RTFDC1-201ENST00000023939 RAB9BQ9NP90 201 aa11.92□□□□□ -0.5
RTFDC1-201ENST00000023939 OR2S2Q9NQN1 319 aa11.92□□□□□ -0.5
RTFDC1-201ENST00000023939 JPT1Q9UK76 154 aa11.92□□□□□ -0.5
RTFDC1-201ENST00000023939 KCNS2Q9ULS6 477 aa11.92□□□□□ -0.5
RTFDC1-201ENST00000023939 BSNQ9UPA5 3926 aa11.92□□□□□ -0.5
RTFDC1-201ENST00000023939 A0A1B0GU03 582 aa11.91□□□□□ -0.5
RTFDC1-201ENST00000023939 E7EQL1 145 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms