RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Hmx3P42581 356 aa11.27□□□□□ -0.61
Nup88-203ENSMUST00000108531 H3f3aP84244 136 aaKnown RBP11.27□□□□□ -0.61
Nup88-203ENSMUST00000108531 F13bQ07968 669 aa11.27□□□□□ -0.61
Nup88-203ENSMUST00000108531 MENTQ569E4 350 aa11.27□□□□□ -0.61
Nup88-203ENSMUST00000108531 Olfr331Q5NC44 324 aa11.27□□□□□ -0.61
Nup88-203ENSMUST00000108531 Olfr324Q5NCC7 333 aa11.27□□□□□ -0.61
Nup88-203ENSMUST00000108531 Slc22a27Q76M72 551 aa11.27□□□□□ -0.61
Nup88-203ENSMUST00000108531 Rnf144bQ8BKD6 301 aa11.27□□□□□ -0.61
Nup88-203ENSMUST00000108531 Rnf122Q8BP31 155 aa11.27□□□□□ -0.61
Nup88-203ENSMUST00000108531 Olfr1411Q8VFC4 323 aa11.27□□□□□ -0.61
Nup88-203ENSMUST00000108531 Mrpl13Q9D1P0 178 aaKnown RBP11.27□□□□□ -0.61
Nup88-203ENSMUST00000108531 ApmapQ9D7N9 415 aa11.27□□□□□ -0.61
Nup88-203ENSMUST00000108531 Zfp869Q9DC47 529 aa11.27□□□□□ -0.61
Nup88-203ENSMUST00000108531 Gnpnat1Q9JK38 184 aa11.27□□□□□ -0.61
Nup88-203ENSMUST00000108531 Elovl1Q9JLJ5 279 aa11.27□□□□□ -0.61
Nup88-203ENSMUST00000108531 Ighv1-78A0A0G2JGN3 117 aa11.27□□□□□ -0.61
Nup88-203ENSMUST00000108531 Prr19B2RW88 366 aa11.27□□□□□ -0.61
Nup88-203ENSMUST00000108531 Arxes1C0HK79 180 aa11.27□□□□□ -0.61
Nup88-203ENSMUST00000108531 Arxes2C0HK80 180 aa11.27□□□□□ -0.61
Nup88-203ENSMUST00000108531 Gm43517E9PYS1 339 aa11.27□□□□□ -0.61
Nup88-203ENSMUST00000108531 Olfr554E9Q546 317 aa11.27□□□□□ -0.61
Nup88-203ENSMUST00000108531 Olfr69E9Q7C5 316 aa11.27□□□□□ -0.61
Nup88-203ENSMUST00000108531 Prr22F6TNE3 422 aa11.27□□□□□ -0.61
Nup88-203ENSMUST00000108531 Il7rP16872 459 aa11.27□□□□□ -0.61
Nup88-203ENSMUST00000108531 Igfbp1P47876 272 aa11.27□□□□□ -0.61
Nup88-203ENSMUST00000108531 Dnase1P49183 284 aa11.27□□□□□ -0.61
Nup88-203ENSMUST00000108531 Cuzd1P70412 606 aa11.27□□□□□ -0.61
Nup88-203ENSMUST00000108531 Tsr3Q5HZH2 323 aa11.27□□□□□ -0.61
Nup88-203ENSMUST00000108531 Kat7Q5SVQ0 613 aaKnown RBP11.27□□□□□ -0.61
Nup88-203ENSMUST00000108531 Nxph2Q61199 261 aa11.27□□□□□ -0.61
Nup88-203ENSMUST00000108531 SordQ64442 357 aa11.27□□□□□ -0.61
Nup88-203ENSMUST00000108531 Slc16a13Q8CE94 428 aa11.27□□□□□ -0.61
Nup88-203ENSMUST00000108531 Lgi3Q8K406 548 aa11.27□□□□□ -0.61
Nup88-203ENSMUST00000108531 Vmn1r217Q8R270 298 aa11.27□□□□□ -0.61
Nup88-203ENSMUST00000108531 Tmem267Q8VDR5 215 aa11.27□□□□□ -0.61
Nup88-203ENSMUST00000108531 Olfr187Q8VEX6 308 aa11.27□□□□□ -0.61
Nup88-203ENSMUST00000108531 Olfr50Q8VGK5 312 aa11.27□□□□□ -0.61
Nup88-203ENSMUST00000108531 Washc3Q9CR27 194 aa11.27□□□□□ -0.61
Nup88-203ENSMUST00000108531 Tomm40lQ9CZR3 308 aa11.27□□□□□ -0.61
Nup88-203ENSMUST00000108531 Mrpl21Q9D1N9 209 aaKnown RBP11.27□□□□□ -0.61
Nup88-203ENSMUST00000108531 Fam210bQ9D8B6 190 aa11.27□□□□□ -0.61
Nup88-203ENSMUST00000108531 Ergic1Q9DC16 290 aaKnown RBP11.27□□□□□ -0.61
Nup88-203ENSMUST00000108531 Mnx1Q9QZW9 404 aa11.27□□□□□ -0.61
Nup88-203ENSMUST00000108531 Akirin2B1AXD8 201 aa11.26□□□□□ -0.61
Nup88-203ENSMUST00000108531 1700015F17RikD3YUK8 150 aa11.26□□□□□ -0.61
Nup88-203ENSMUST00000108531 Olfr740E9PV79 311 aa11.26□□□□□ -0.61
Nup88-203ENSMUST00000108531 Gm7233E9PZI8 198 aa11.26□□□□□ -0.61
Nup88-203ENSMUST00000108531 Zfp764E9QAP1 431 aa11.26□□□□□ -0.61
Nup88-203ENSMUST00000108531 Gm9732F6QVC4 198 aa11.26□□□□□ -0.61
Nup88-203ENSMUST00000108531 Yjefn3F6W8I0 251 aa11.26□□□□□ -0.61
Nup88-203ENSMUST00000108531 Gm9772F6XPD8 135 aa11.26□□□□□ -0.61
Nup88-203ENSMUST00000108531 Gm6882J3KMT3 313 aa11.26□□□□□ -0.61
Nup88-203ENSMUST00000108531 Gm8104K7N744 198 aa11.26□□□□□ -0.61
Nup88-203ENSMUST00000108531 Ifitm5O88728 134 aa11.26□□□□□ -0.61
Nup88-203ENSMUST00000108531 Adh1P00329 375 aa11.26□□□□□ -0.61
Nup88-203ENSMUST00000108531 Pax6P63015 422 aa11.26□□□□□ -0.61
Nup88-203ENSMUST00000108531 Mpzl1Q3TEW6 270 aa11.26□□□□□ -0.61
Nup88-203ENSMUST00000108531 Gm10662Q3UT86 313 aa11.26□□□□□ -0.61
Nup88-203ENSMUST00000108531 Foxf1Q61080 378 aa11.26□□□□□ -0.61
Nup88-203ENSMUST00000108531 ZpbpQ62522 350 aa11.26□□□□□ -0.61
Nup88-203ENSMUST00000108531 Fam234bQ8BYI8 624 aa11.26□□□□□ -0.61
Nup88-203ENSMUST00000108531 YbeyQ8CAV0 164 aa11.26□□□□□ -0.61
Nup88-203ENSMUST00000108531 Olfr827Q8VEV5 322 aa11.26□□□□□ -0.61
Nup88-203ENSMUST00000108531 Olfr52Q8VFL0 319 aa11.26□□□□□ -0.61
Nup88-203ENSMUST00000108531 Olfr24Q8VFM9 313 aa11.26□□□□□ -0.61
Nup88-203ENSMUST00000108531 Ddah2Q99LD8 285 aa11.26□□□□□ -0.61
Nup88-203ENSMUST00000108531 Vgll1Q99NC0 307 aa11.26□□□□□ -0.61
Nup88-203ENSMUST00000108531 Mrps30Q9D0G0 442 aaKnown RBP11.26□□□□□ -0.61
Nup88-203ENSMUST00000108531 DnlzQ9D113 177 aa11.26□□□□□ -0.61
Nup88-203ENSMUST00000108531 Nol3Q9D1X0 220 aa11.26□□□□□ -0.61
Nup88-203ENSMUST00000108531 Ube2v2Q9D2M8 145 aa11.26□□□□□ -0.61
Nup88-203ENSMUST00000108531 Spsb1Q9D5L7 273 aa11.26□□□□□ -0.61
Nup88-203ENSMUST00000108531 Bola1Q9D8S9 137 aaKnown RBP11.26□□□□□ -0.61
Nup88-203ENSMUST00000108531 Naa60Q9DBU2 242 aa11.26□□□□□ -0.61
Nup88-203ENSMUST00000108531 Gm17657E9PWY5 170 aa11.26□□□□□ -0.61
Nup88-203ENSMUST00000108531 Olfr635K7N6B1 321 aa11.26□□□□□ -0.61
Nup88-203ENSMUST00000108531 Ifna1P01572 189 aa11.26□□□□□ -0.61
Nup88-203ENSMUST00000108531 Meox2P32443 303 aa11.26□□□□□ -0.61
Nup88-203ENSMUST00000108531 Rab5bP61021 215 aa11.26□□□□□ -0.61
Nup88-203ENSMUST00000108531 Gls2Q571F8 602 aa11.26□□□□□ -0.61
Nup88-203ENSMUST00000108531 Zfp663Q6NXM6 656 aa11.26□□□□□ -0.61
Nup88-203ENSMUST00000108531 Olfr1385Q7TQT1 309 aa11.26□□□□□ -0.61
Nup88-203ENSMUST00000108531 Olfr524Q7TRU0 318 aa11.26□□□□□ -0.61
Nup88-203ENSMUST00000108531 Olfr506Q7TRU6 314 aa11.26□□□□□ -0.61
Nup88-203ENSMUST00000108531 Vmn1r178Q8R2B6 304 aa11.26□□□□□ -0.61
Nup88-203ENSMUST00000108531 Olfr460Q8VF31 314 aa11.26□□□□□ -0.61
Nup88-203ENSMUST00000108531 Taf9Q8VI33 264 aa11.26□□□□□ -0.61
Nup88-203ENSMUST00000108531 SdhbQ9CQA3 282 aa11.26□□□□□ -0.61
Nup88-203ENSMUST00000108531 SrpxQ9R0M3 464 aa11.26□□□□□ -0.61
Nup88-203ENSMUST00000108531 Timm9Q9WV98 89 aaKnown RBP11.26□□□□□ -0.61
Nup88-203ENSMUST00000108531 Gm45808A0A1B0GSH8 263 aa11.25□□□□□ -0.61
Nup88-203ENSMUST00000108531 Zdhhc22A0PK84 263 aa11.25□□□□□ -0.61
Nup88-203ENSMUST00000108531 Gm14403A2BFU4 402 aa11.25□□□□□ -0.61
Nup88-203ENSMUST00000108531 Gm3573L7N292 184 aa11.25□□□□□ -0.61
Nup88-203ENSMUST00000108531 Siva1O54926 175 aa11.25□□□□□ -0.61
Nup88-203ENSMUST00000108531 Ifna9P09235 190 aa11.25□□□□□ -0.61
Nup88-203ENSMUST00000108531 Tdpoz1P0DMR5 365 aa11.25□□□□□ -0.61
Nup88-203ENSMUST00000108531 Cxcl10P17515 98 aa11.25□□□□□ -0.61
Nup88-203ENSMUST00000108531 AvpP35455 168 aa11.25□□□□□ -0.61
Nup88-203ENSMUST00000108531 Olfr1442Q0VEV7 312 aa11.25□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 29.8 ms