RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 Polr3kQ9CQZ7 108 aa7.32□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Htra3Q9D236 459 aa7.32□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Lin37Q9D8N6 246 aa7.32□□□□□ -1.24
Cdc40-201ENSMUST00000044166 ClnkQ9QZE2 435 aa7.32□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Clec4dQ9Z2H6 219 aa7.32□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Scgb1b10A0A087WPW0 93 aa7.32□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Trav12-2A0N8N6 114 aa7.32□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Lrp3E9Q1T6 790 aa7.32□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Hoxa1P09022 331 aa7.32□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Hist1h2bfP10853 126 aa7.32□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Irf1P15314 329 aa7.32□□□□□ -1.24
Cdc40-201ENSMUST00000044166 PlgP20918 812 aa7.32□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Rab18P35293 206 aa7.32□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Mesp1P97309 243 aa7.32□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Ankub1Q3UUE9 192 aa7.32□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Rasl2-9Q61820 216 aa7.32□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Hist1h2bbQ64475 126 aa7.32□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Taf9bQ6NZA9 249 aa7.32□□□□□ -1.24
Cdc40-201ENSMUST00000044166 March1Q6NZQ8 289 aa7.32□□□□□ -1.24
Cdc40-201ENSMUST00000044166 BckdhbQ6P3A8 390 aa7.32□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Mboat1Q8BH98 492 aa7.32□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Q8BTC1 67 aa7.32□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Hist1h2bkQ8CGP1 126 aaKnown RBP7.32□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Hist1h2bpQ8CGP2 126 aaKnown RBP7.32□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Olfr187Q8VEX6 308 aa7.32□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Olfr1260Q8VGN9 310 aa7.32□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Olfr979Q8VH10 311 aa7.32□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Arrdc1Q99KN1 434 aa7.32□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Elp5Q99L85 300 aa7.32□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Kti12Q9D1R2 351 aa7.32□□□□□ -1.24
Cdc40-201ENSMUST00000044166 S100a16Q9D708 124 aa7.32□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Fam219aQ9D772 157 aa7.32□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Rep15Q9D7T1 230 aa7.32□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Ppp1r1aQ9ERT9 171 aa7.32□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Kcne3Q9WTW2 103 aa7.32□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Cldn15Q9Z0S5 227 aa7.32□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Gm10428J3QNV7 132 aa7.31□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Sigmar1O55242 223 aa7.31□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Fgf13P70377 245 aa7.31□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Smn1P97801 288 aa7.31□□□□□ -1.24
Cdc40-201ENSMUST00000044166 SlaQ60898 281 aa7.31□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Pafah1b3Q61205 232 aa7.31□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Olfr305Q7TS02 319 aa7.31□□□□□ -1.24
Cdc40-201ENSMUST00000044166 2610318N02RikQ80VT5 305 aa7.31□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Lsm11Q8BUV6 361 aa7.31□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Xkr8Q8C0T0 401 aa7.31□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Ssxb2Q8C5Z3 165 aa7.31□□□□□ -1.24
Cdc40-201ENSMUST00000044166 SccpdhQ8R127 429 aa7.31□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Olfr101Q920Z0 308 aa7.31□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Letmd1Q924L1 360 aa7.31□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Ubqln4Q99NB8 596 aa7.31□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Glipr2Q9CYL5 154 aa7.31□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Nkain1Q9D035 207 aa7.31□□□□□ -1.24
Cdc40-201ENSMUST00000044166 C1ql3Q9ESN4 255 aa7.31□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Dock4P59764 1978 aa7.31□□□□□ -1.24
Cdc40-201ENSMUST00000044166 FggyA2AJL3 552 aa7.31□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Gm8677K9J7G9 307 aa7.31□□□□□ -1.24
Cdc40-201ENSMUST00000044166 RpiaP47968 303 aa7.31□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Sox19Q62249 55 aa7.31□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Olfr1026Q7TR90 307 aa7.31□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Olfr43Q7TRX1 313 aa7.31□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Olfr403Q7TRX2 313 aa7.31□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Mospd3Q8BGG6 235 aa7.31□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Tceal5Q8CCT4 200 aa7.31□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Colec10Q8CF98 277 aa7.31□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Olfr1279Q8VF38 313 aa7.31□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Olfr378Q8VGT2 314 aa7.31□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Cacng5Q8VHW4 275 aa7.31□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Tmem42Q9CR22 157 aa7.31□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Sec13Q9D1M0 322 aa7.31□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Fbxo24Q9D417 589 aa7.31□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Clec6aQ9JKF4 209 aa7.31□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Slc30a7Q9JKN1 378 aa7.31□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Klrc3Q9QXN7 221 aa7.31□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Gm11214V9GX06 183 aa7.31□□□□□ -1.24
Cdc40-201ENSMUST00000044166 RttnQ8R4Y8 2226 aa7.31□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Gm17655A0A1B0GT13 591 aa7.31□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Gm45783A0A1B0GT48 74 aa7.31□□□□□ -1.24
Cdc40-201ENSMUST00000044166 BC035044E0CXF8 138 aa7.31□□□□□ -1.24
Cdc40-201ENSMUST00000044166 CckarO08786 436 aa7.31□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Lmx1bO88609 395 aa7.31□□□□□ -1.24
Cdc40-201ENSMUST00000044166 LcatP16301 438 aa7.31□□□□□ -1.24
Cdc40-201ENSMUST00000044166 CtgfP29268 348 aa7.31□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Hcrtr2P58308 460 aa7.31□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Ear2P97425 156 aa7.31□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Nxph2Q61199 261 aa7.31□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Agfg2Q80WC7 479 aa7.31□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Eif5a2Q8BGY2 153 aaKnown RBP7.31□□□□□ -1.24
Cdc40-201ENSMUST00000044166 F830045P16RikQ8BJ95 487 aa7.31□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Actrt3Q8BXF8 369 aa7.31□□□□□ -1.24
Cdc40-201ENSMUST00000044166 CmblQ8R1G2 245 aa7.31□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Vmn1r21Q8R2C6 297 aa7.31□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Olfr1002Q8VFK2 318 aa7.31□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Cdc42ep1Q91W92 409 aa7.31□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Gjc3Q921C1 269 aa7.31□□□□□ -1.24
Cdc40-201ENSMUST00000044166 B3gat1Q9CW73 334 aa7.31□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Tmem30cQ9D4D7 342 aa7.31□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Mrps34Q9JIK9 218 aa7.31□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Cst10Q9JM84 148 aa7.31□□□□□ -1.24
Cdc40-201ENSMUST00000044166 Unc119Q9Z2R6 240 aa7.31□□□□□ -1.24
Retrieved 100 of 22,080 RNA–protein pairs in 40.3 ms