RNA–Protein interactions for RNA: ENST00000638889.1

CCDC7-211, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-211ENST00000638889 UAP1Q16222 522 aaPredicted RBP0.44□□□□□ -2.34
CCDC7-211ENST00000638889 AGTRAPQ6RW13 159 aa0.44□□□□□ -2.34
CCDC7-211ENST00000638889 TRIML2Q8N7C3 387 aa0.44□□□□□ -2.34
CCDC7-211ENST00000638889 SUN5Q8TC36 379 aa0.44□□□□□ -2.34
CCDC7-211ENST00000638889 TOP1MTQ969P6 601 aa0.44□□□□□ -2.34
CCDC7-211ENST00000638889 FAM131CQ96AQ9 280 aa0.44□□□□□ -2.34
CCDC7-211ENST00000638889 NAP1L5Q96NT1 182 aaPredicted RBP0.44□□□□□ -2.34
CCDC7-211ENST00000638889 BABAM2Q9NXR7 383 aa0.44□□□□□ -2.34
CCDC7-211ENST00000638889 TNIKQ9UKE5 1360 aa0.44□□□□□ -2.34
CCDC7-211ENST00000638889 TRIM64CA6NLI5 447 aa0.43□□□□□ -2.34
CCDC7-211ENST00000638889 A8MUN3 132 aa0.43□□□□□ -2.34
CCDC7-211ENST00000638889 I3L4J1 428 aa0.43□□□□□ -2.34
CCDC7-211ENST00000638889 PRMT5O14744 637 aaPredicted RBP0.43□□□□□ -2.34
CCDC7-211ENST00000638889 FGF16O43320 207 aa0.43□□□□□ -2.34
CCDC7-211ENST00000638889 ENSAO43768 121 aaKnown RBP0.43□□□□□ -2.34
CCDC7-211ENST00000638889 IGHV3-30-3P0DP02 117 aa0.43□□□□□ -2.34
CCDC7-211ENST00000638889 HSPA13P48723 471 aa0.43□□□□□ -2.34
CCDC7-211ENST00000638889 MP68P56378 58 aa0.43□□□□□ -2.34
CCDC7-211ENST00000638889 Q6ZTI0 123 aa0.43□□□□□ -2.34
CCDC7-211ENST00000638889 LINC00523Q86TU6 105 aa0.43□□□□□ -2.34
CCDC7-211ENST00000638889 SPICQ8N5J4 248 aa0.43□□□□□ -2.34
CCDC7-211ENST00000638889 OR11H1Q8NG94 326 aa0.43□□□□□ -2.34
CCDC7-211ENST00000638889 OR10A6Q8NH74 314 aa0.43□□□□□ -2.34
CCDC7-211ENST00000638889 EBPLQ9BY08 206 aa0.43□□□□□ -2.34
CCDC7-211ENST00000638889 CRLF2Q9HC73 371 aa0.43□□□□□ -2.34
CCDC7-211ENST00000638889 USH1CQ9Y6N9 552 aa0.43□□□□□ -2.34
CCDC7-211ENST00000638889 IGHV3-15A0A0B4J1V0 119 aa0.42□□□□□ -2.34
CCDC7-211ENST00000638889 K7EQS6 105 aa0.42□□□□□ -2.34
CCDC7-211ENST00000638889 LY6HO94772 140 aa0.42□□□□□ -2.34
CCDC7-211ENST00000638889 PTMSP20962 102 aa0.42□□□□□ -2.34
CCDC7-211ENST00000638889 TSPOP30536 169 aa0.42□□□□□ -2.34
CCDC7-211ENST00000638889 CD200P41217 278 aa0.42□□□□□ -2.34
CCDC7-211ENST00000638889 AKR1C2P52895 323 aa0.42□□□□□ -2.34
CCDC7-211ENST00000638889 DEFA6Q01524 100 aa0.42□□□□□ -2.34
CCDC7-211ENST00000638889 PRDX1Q06830 199 aaKnown RBP0.42□□□□□ -2.34
CCDC7-211ENST00000638889 MRPL51Q4U2R6 128 aaKnown RBP0.42□□□□□ -2.34
CCDC7-211ENST00000638889 ACTL10Q5JWF8 245 aa0.42□□□□□ -2.34
CCDC7-211ENST00000638889 OR6N2Q8NGY6 317 aa0.42□□□□□ -2.34
CCDC7-211ENST00000638889 MAP1LC3CQ9BXW4 147 aa0.42□□□□□ -2.34
CCDC7-211ENST00000638889 FBXO44Q9H4M3 255 aa0.42□□□□□ -2.34
CCDC7-211ENST00000638889 ANKHQ9HCJ1 492 aa0.42□□□□□ -2.34
CCDC7-211ENST00000638889 SOX21Q9Y651 276 aaPredicted RBP0.42□□□□□ -2.34
CCDC7-211ENST00000638889 DISP1Q96F81 1524 aa0.42□□□□□ -2.34
CCDC7-211ENST00000638889 MYO15BQ96JP2 1530 aa0.42□□□□□ -2.34
CCDC7-211ENST00000638889 IGHV3-73A0A0B4J1V6 119 aa0.41□□□□□ -2.34
CCDC7-211ENST00000638889 SPNP16150 400 aa0.41□□□□□ -2.34
CCDC7-211ENST00000638889 RAP1GDS1P52306 607 aa0.41□□□□□ -2.34
CCDC7-211ENST00000638889 DSTNP60981 165 aa0.41□□□□□ -2.34
CCDC7-211ENST00000638889 LAMTOR1Q6IAA8 161 aa0.41□□□□□ -2.34
CCDC7-211ENST00000638889 DGAT2L6Q6ZPD8 337 aa0.41□□□□□ -2.34
CCDC7-211ENST00000638889 SLC35F6Q8N357 371 aa0.41□□□□□ -2.34
CCDC7-211ENST00000638889 FAM184AQ8NB25 1140 aa0.41□□□□□ -2.34
CCDC7-211ENST00000638889 OR8G5Q8NG78 346 aa0.41□□□□□ -2.34
CCDC7-211ENST00000638889 OR9I1Q8NGQ6 314 aa0.41□□□□□ -2.34
CCDC7-211ENST00000638889 OR6K2Q8NGY2 324 aa0.41□□□□□ -2.34
CCDC7-211ENST00000638889 CDKL2Q92772 493 aa0.41□□□□□ -2.34
CCDC7-211ENST00000638889 KIAA1143Q96AT1 154 aaPredicted RBP0.41□□□□□ -2.34
CCDC7-211ENST00000638889 ZMYND19Q96E35 227 aaPredicted RBP0.41□□□□□ -2.34
CCDC7-211ENST00000638889 C1QTNF6Q9BXI9 259 aa0.41□□□□□ -2.34
CCDC7-211ENST00000638889 SYT4Q9H2B2 425 aa0.41□□□□□ -2.34
CCDC7-211ENST00000638889 XKR8Q9H6D3 395 aa0.41□□□□□ -2.34
CCDC7-211ENST00000638889 C11orf49Q9H6J7 331 aa0.41□□□□□ -2.34
CCDC7-211ENST00000638889 ANGPT4Q9Y264 503 aa0.41□□□□□ -2.34
CCDC7-211ENST00000638889 PUS1Q9Y606 427 aaKnown RBP eCLIP0.41□□□□□ -2.34
CCDC7-211ENST00000638889 ATAD5Q96QE3 1844 aa0.41□□□□□ -2.34
CCDC7-211ENST00000638889 ZNF638Q14966 1978 aaKnown RBP0.4□□□□□ -2.35
CCDC7-211ENST00000638889 IGKV2-40A0A087WW87 121 aaPredicted RBP0.4□□□□□ -2.35
CCDC7-211ENST00000638889 TRAV8-2A0A0B4J237 113 aa0.4□□□□□ -2.35
CCDC7-211ENST00000638889 DHRS12A0PJE2 317 aa0.4□□□□□ -2.35
CCDC7-211ENST00000638889 C11orf86A6NJI1 115 aa0.4□□□□□ -2.35
CCDC7-211ENST00000638889 C8orf87E5RJ46 101 aa0.4□□□□□ -2.35
CCDC7-211ENST00000638889 H3BPC8 53 aa0.4□□□□□ -2.35
CCDC7-211ENST00000638889 RFXANKO14593 260 aa0.4□□□□□ -2.35
CCDC7-211ENST00000638889 IGKV2D-40P01614 121 aaPredicted RBP0.4□□□□□ -2.35
CCDC7-211ENST00000638889 CTAG1AP78358 180 aa0.4□□□□□ -2.35
CCDC7-211ENST00000638889 ZNF90Q03938 601 aa0.4□□□□□ -2.35
CCDC7-211ENST00000638889 PDGFRLQ15198 375 aa0.4□□□□□ -2.35
CCDC7-211ENST00000638889 FAM162BQ5T6X4 162 aa0.4□□□□□ -2.35
CCDC7-211ENST00000638889 EBLN2Q6P2I7 272 aa0.4□□□□□ -2.35
CCDC7-211ENST00000638889 FAM183BPQ6ZVS7 135 aa0.4□□□□□ -2.35
CCDC7-211ENST00000638889 GLT6D1Q7Z4J2 308 aa0.4□□□□□ -2.35
CCDC7-211ENST00000638889 OR4K17Q8NGC6 315 aa0.4□□□□□ -2.35
CCDC7-211ENST00000638889 RNF133Q8WVZ7 376 aa0.4□□□□□ -2.35
CCDC7-211ENST00000638889 GALMQ96C23 342 aa0.4□□□□□ -2.35
CCDC7-211ENST00000638889 MGLLQ99685 303 aa0.4□□□□□ -2.35
CCDC7-211ENST00000638889 PRSS27Q9BQR3 290 aa0.4□□□□□ -2.35
CCDC7-211ENST00000638889 COPS4Q9BT78 406 aa0.4□□□□□ -2.35
CCDC7-211ENST00000638889 FBXL15Q9H469 300 aa0.4□□□□□ -2.35
CCDC7-211ENST00000638889 TTC41PQ6P2S7 1318 aa0.39□□□□□ -2.35
CCDC7-211ENST00000638889 IGKV3D-7A0A0C4DH55 119 aa0.39□□□□□ -2.35
CCDC7-211ENST00000638889 IGKV3OR2-268A0A0C4DH90 116 aa0.39□□□□□ -2.35
CCDC7-211ENST00000638889 A0A1W2PPV4 95 aa0.39□□□□□ -2.35
CCDC7-211ENST00000638889 B4DEV8 164 aa0.39□□□□□ -2.35
CCDC7-211ENST00000638889 CASC3O15234 703 aaKnown RBP0.39□□□□□ -2.35
CCDC7-211ENST00000638889 GNRH2O43555 120 aa0.39□□□□□ -2.35
CCDC7-211ENST00000638889 MBP02144 154 aa0.39□□□□□ -2.35
CCDC7-211ENST00000638889 CTSEP14091 401 aa0.39□□□□□ -2.35
CCDC7-211ENST00000638889 SLC25A16P16260 332 aa0.39□□□□□ -2.35
CCDC7-211ENST00000638889 PSMA1P25786 263 aaKnown RBP0.39□□□□□ -2.35
CCDC7-211ENST00000638889 RPL14P50914 215 aaKnown RBP0.39□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms