RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 HLA-DRB5Q30154 266 aa11.95□□□□□ -0.5
CDC42BPB-209ENST00000634889 C16orf87Q6PH81 154 aa11.95□□□□□ -0.5
CDC42BPB-209ENST00000634889 MOB1BQ7L9L4 216 aa11.95□□□□□ -0.5
CDC42BPB-209ENST00000634889 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.95□□□□□ -0.5
CDC42BPB-209ENST00000634889 OR10R2Q8NGX6 335 aa11.95□□□□□ -0.5
CDC42BPB-209ENST00000634889 NDNFQ8TB73 568 aa11.95□□□□□ -0.5
CDC42BPB-209ENST00000634889 RAB3CQ96E17 227 aa11.95□□□□□ -0.5
CDC42BPB-209ENST00000634889 ARHGAP5-AS1Q96IT6 56 aa11.95□□□□□ -0.5
CDC42BPB-209ENST00000634889 PECRQ9BY49 303 aa11.95□□□□□ -0.5
CDC42BPB-209ENST00000634889 CHIAQ9BZP6 476 aa11.95□□□□□ -0.5
CDC42BPB-209ENST00000634889 C12orf4Q9NQ89 552 aa11.95□□□□□ -0.5
CDC42BPB-209ENST00000634889 AMMECR1Q9Y4X0 333 aaPredicted RBP11.95□□□□□ -0.5
CDC42BPB-209ENST00000634889 ETV7Q9Y603 341 aa11.95□□□□□ -0.5
CDC42BPB-209ENST00000634889 TRBV6-6A0A0A6YYG2 114 aa11.94□□□□□ -0.5
CDC42BPB-209ENST00000634889 RAB27BO00194 218 aa11.94□□□□□ -0.5
CDC42BPB-209ENST00000634889 SDCBPO00560 298 aaPredicted RBP11.94□□□□□ -0.5
CDC42BPB-209ENST00000634889 SCGNO76038 276 aa11.94□□□□□ -0.5
CDC42BPB-209ENST00000634889 HBZP02008 142 aa11.94□□□□□ -0.5
CDC42BPB-209ENST00000634889 CEACAM3P40198 252 aa11.94□□□□□ -0.5
CDC42BPB-209ENST00000634889 ALDH3B2P48448 385 aa11.94□□□□□ -0.5
CDC42BPB-209ENST00000634889 LOXL3P58215 753 aa11.94□□□□□ -0.5
CDC42BPB-209ENST00000634889 LSM3P62310 102 aaKnown RBP11.94□□□□□ -0.5
CDC42BPB-209ENST00000634889 ACTG1P63261 375 aa11.94□□□□□ -0.5
CDC42BPB-209ENST00000634889 ARL6IP1Q15041 203 aa11.94□□□□□ -0.5
CDC42BPB-209ENST00000634889 LTC4SQ16873 150 aa11.94□□□□□ -0.5
CDC42BPB-209ENST00000634889 Q3ZCU0 254 aa11.94□□□□□ -0.5
CDC42BPB-209ENST00000634889 PLAC9Q5JTB6 97 aa11.94□□□□□ -0.5
CDC42BPB-209ENST00000634889 LDLRAD2Q5SZI1 272 aa11.94□□□□□ -0.5
CDC42BPB-209ENST00000634889 ZNF880Q6PDB4 577 aa11.94□□□□□ -0.5
CDC42BPB-209ENST00000634889 C8orf31Q8N9H6 132 aa11.94□□□□□ -0.5
CDC42BPB-209ENST00000634889 LGALS14Q8TCE9 139 aa11.94□□□□□ -0.5
CDC42BPB-209ENST00000634889 CYYR1Q96J86 154 aa11.94□□□□□ -0.5
CDC42BPB-209ENST00000634889 SSX3Q99909 188 aa11.94□□□□□ -0.5
CDC42BPB-209ENST00000634889 MMP28Q9H239 520 aa11.94□□□□□ -0.5
CDC42BPB-209ENST00000634889 TAF9BQ9HBM6 251 aa11.94□□□□□ -0.5
CDC42BPB-209ENST00000634889 CHMP1AQ9HD42 196 aaPredicted RBP11.94□□□□□ -0.5
CDC42BPB-209ENST00000634889 DPM3Q9P2X0 92 aa11.94□□□□□ -0.5
CDC42BPB-209ENST00000634889 AK3Q9UIJ7 227 aa11.94□□□□□ -0.5
CDC42BPB-209ENST00000634889 VPREB3Q9UKI3 123 aa11.94□□□□□ -0.5
CDC42BPB-209ENST00000634889 MGAT4AQ9UM21 535 aa11.94□□□□□ -0.5
CDC42BPB-209ENST00000634889 PSG11Q9UQ72 335 aa11.94□□□□□ -0.5
CDC42BPB-209ENST00000634889 SERPINE3A8MV23 424 aa11.93□□□□□ -0.5
CDC42BPB-209ENST00000634889 LEUTXA8MZ59 168 aa11.93□□□□□ -0.5
CDC42BPB-209ENST00000634889 BUB1B-PAK6H3BSN5 160 aa11.93□□□□□ -0.5
CDC42BPB-209ENST00000634889 H3BUX3 64 aa11.93□□□□□ -0.5
CDC42BPB-209ENST00000634889 J3QR06 171 aa11.93□□□□□ -0.5
CDC42BPB-209ENST00000634889 GABARAPO95166 117 aa11.93□□□□□ -0.5
CDC42BPB-209ENST00000634889 TFAP2AP05549 437 aa11.93□□□□□ -0.5
CDC42BPB-209ENST00000634889 SNRPBP14678 240 aaKnown RBP11.93□□□□□ -0.5
CDC42BPB-209ENST00000634889 HIST1H1DP16402 221 aaKnown RBP11.93□□□□□ -0.5
CDC42BPB-209ENST00000634889 TGFBR1P36897 503 aa11.93□□□□□ -0.5
CDC42BPB-209ENST00000634889 DYNLT3P51808 116 aa11.93□□□□□ -0.5
CDC42BPB-209ENST00000634889 ARHGDIBP52566 201 aa11.93□□□□□ -0.5
CDC42BPB-209ENST00000634889 HMGN3Q15651 99 aa11.93□□□□□ -0.5
CDC42BPB-209ENST00000634889 SSX2Q16385 188 aa11.93□□□□□ -0.5
CDC42BPB-209ENST00000634889 MOGAT2Q3SYC2 334 aa11.93□□□□□ -0.5
CDC42BPB-209ENST00000634889 IDNKQ5T6J7 187 aa11.93□□□□□ -0.5
CDC42BPB-209ENST00000634889 ANKRD13BQ86YJ7 626 aa11.93□□□□□ -0.5
CDC42BPB-209ENST00000634889 PRR18Q8N4B5 295 aa11.93□□□□□ -0.5
CDC42BPB-209ENST00000634889 ATG5Q9H1Y0 275 aa11.93□□□□□ -0.5
CDC42BPB-209ENST00000634889 TNFRSF19Q9NS68 423 aa11.93□□□□□ -0.5
CDC42BPB-209ENST00000634889 GFOD1Q9NXC2 390 aa11.93□□□□□ -0.5
CDC42BPB-209ENST00000634889 TMEM89A2RUT3 159 aa11.92□□□□□ -0.5
CDC42BPB-209ENST00000634889 OOSP1A8MZH6 123 aa11.92□□□□□ -0.5
CDC42BPB-209ENST00000634889 MFNGO00587 321 aa11.92□□□□□ -0.5
CDC42BPB-209ENST00000634889 RPS19P39019 145 aaKnown RBP11.92□□□□□ -0.5
CDC42BPB-209ENST00000634889 GNG10P50151 68 aa11.92□□□□□ -0.5
CDC42BPB-209ENST00000634889 NCS1P62166 190 aa11.92□□□□□ -0.5
CDC42BPB-209ENST00000634889 MRPS15P82914 257 aaKnown RBP11.92□□□□□ -0.5
CDC42BPB-209ENST00000634889 HTD2P86397 168 aa11.92□□□□□ -0.5
CDC42BPB-209ENST00000634889 UTF1Q5T230 341 aa11.92□□□□□ -0.5
CDC42BPB-209ENST00000634889 LIAT1Q6ZQX7 453 aa11.92□□□□□ -0.5
CDC42BPB-209ENST00000634889 GPR141Q7Z602 305 aa11.92□□□□□ -0.5
CDC42BPB-209ENST00000634889 DYNAPQ8N1N2 210 aa11.92□□□□□ -0.5
CDC42BPB-209ENST00000634889 SPATA3Q8NHX4 192 aa11.92□□□□□ -0.5
CDC42BPB-209ENST00000634889 LEAP2Q969E1 77 aa11.92□□□□□ -0.5
CDC42BPB-209ENST00000634889 GALMQ96C23 342 aa11.92□□□□□ -0.5
CDC42BPB-209ENST00000634889 CMSS1Q9BQ75 279 aaKnown RBP11.92□□□□□ -0.5
CDC42BPB-209ENST00000634889 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.92□□□□□ -0.5
CDC42BPB-209ENST00000634889 RHBDL2Q9NX52 303 aa11.92□□□□□ -0.5
CDC42BPB-209ENST00000634889 ABRACLQ9P1F3 81 aa11.92□□□□□ -0.5
CDC42BPB-209ENST00000634889 GNG12Q9UBI6 72 aa11.92□□□□□ -0.5
CDC42BPB-209ENST00000634889 JPT1Q9UK76 154 aa11.92□□□□□ -0.5
CDC42BPB-209ENST00000634889 SPATA2Q9UM82 520 aa11.92□□□□□ -0.5
CDC42BPB-209ENST00000634889 KCNK7Q9Y2U2 307 aa11.92□□□□□ -0.5
CDC42BPB-209ENST00000634889 HILPDAQ9Y5L2 63 aa11.92□□□□□ -0.5
CDC42BPB-209ENST00000634889 FAM181BA6NEQ2 426 aa11.91□□□□□ -0.5
CDC42BPB-209ENST00000634889 LY6LH3BQJ8 138 aa11.91□□□□□ -0.5
CDC42BPB-209ENST00000634889 GPR137BO60478 399 aa11.91□□□□□ -0.5
CDC42BPB-209ENST00000634889 CRYBA1P05813 215 aa11.91□□□□□ -0.5
CDC42BPB-209ENST00000634889 HKR1P10072 659 aa11.91□□□□□ -0.5
CDC42BPB-209ENST00000634889 GNB3P16520 340 aa11.91□□□□□ -0.5
CDC42BPB-209ENST00000634889 VBP1P61758 197 aa11.91□□□□□ -0.5
CDC42BPB-209ENST00000634889 MADCAM1Q13477 382 aa11.91□□□□□ -0.5
CDC42BPB-209ENST00000634889 CTF1Q16619 201 aa11.91□□□□□ -0.5
CDC42BPB-209ENST00000634889 TPTE2P1Q5T6R2 138 aa11.91□□□□□ -0.5
CDC42BPB-209ENST00000634889 STEAP3Q658P3 488 aa11.91□□□□□ -0.5
CDC42BPB-209ENST00000634889 CCDC144NLQ6NUI1 221 aa11.91□□□□□ -0.5
CDC42BPB-209ENST00000634889 Q6ZPA2 131 aa11.91□□□□□ -0.5
CDC42BPB-209ENST00000634889 LINC00311Q8N616 119 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms