RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 HEPN1Q6WQI6 88 aa12.52□□□□□ -0.41
SNRNP48-203ENST00000634363 LIAT1Q6ZQX7 453 aa12.52□□□□□ -0.41
SNRNP48-203ENST00000634363 TPRA1Q86W33 373 aa12.52□□□□□ -0.41
SNRNP48-203ENST00000634363 TMEM219Q86XT9 240 aa12.52□□□□□ -0.41
SNRNP48-203ENST00000634363 OR13A1Q8NGR1 328 aa12.52□□□□□ -0.41
SNRNP48-203ENST00000634363 MRGPRDQ8TDS7 321 aa12.52□□□□□ -0.41
SNRNP48-203ENST00000634363 TM2D1Q9BX74 207 aa12.52□□□□□ -0.41
SNRNP48-203ENST00000634363 ABCB10Q9NRK6 738 aa12.52□□□□□ -0.41
SNRNP48-203ENST00000634363 SERTAD4Q9NUC0 356 aa12.52□□□□□ -0.41
SNRNP48-203ENST00000634363 AURKAIP1Q9NWT8 199 aaPredicted RBP12.52□□□□□ -0.41
SNRNP48-203ENST00000634363 KBTBD11-OT1A0A1B0GTJ5 212 aa12.51□□□□□ -0.41
SNRNP48-203ENST00000634363 SMIM30A4D0T7 59 aa12.51□□□□□ -0.41
SNRNP48-203ENST00000634363 NOTOA8MTQ0 251 aa12.51□□□□□ -0.41
SNRNP48-203ENST00000634363 CA11O75493 328 aa12.51□□□□□ -0.41
SNRNP48-203ENST00000634363 ARG1P05089 322 aa12.51□□□□□ -0.41
SNRNP48-203ENST00000634363 DYNC1I2Q13409 638 aaKnown RBP12.51□□□□□ -0.41
SNRNP48-203ENST00000634363 SSX2Q16385 188 aa12.51□□□□□ -0.41
SNRNP48-203ENST00000634363 C2orf76Q3KRA6 126 aa12.51□□□□□ -0.41
SNRNP48-203ENST00000634363 SIGIRRQ6IA17 410 aa12.51□□□□□ -0.41
SNRNP48-203ENST00000634363 CCBE1Q6UXH8 406 aaPredicted RBP12.51□□□□□ -0.41
SNRNP48-203ENST00000634363 ZNF497Q6ZNH5 498 aa12.51□□□□□ -0.41
SNRNP48-203ENST00000634363 NDUFA11Q86Y39 141 aa12.51□□□□□ -0.41
SNRNP48-203ENST00000634363 DYNAPQ8N1N2 210 aa12.51□□□□□ -0.41
SNRNP48-203ENST00000634363 OR4F17Q8NGA8 305 aa12.51□□□□□ -0.41
SNRNP48-203ENST00000634363 PHF21AQ96BD5 680 aa12.51□□□□□ -0.41
SNRNP48-203ENST00000634363 OR4F4Q96R69 305 aa12.51□□□□□ -0.41
SNRNP48-203ENST00000634363 NICN1Q9BSH3 213 aa12.51□□□□□ -0.41
SNRNP48-203ENST00000634363 TMEM133Q9H2Q1 129 aa12.51□□□□□ -0.41
SNRNP48-203ENST00000634363 LIN7BQ9HAP6 207 aa12.51□□□□□ -0.41
SNRNP48-203ENST00000634363 CALYQ9NYX4 217 aa12.51□□□□□ -0.41
SNRNP48-203ENST00000634363 TRAPPC2LQ9UL33 140 aa12.51□□□□□ -0.41
SNRNP48-203ENST00000634363 A0A1W2PRX2 142 aa12.5□□□□□ -0.41
SNRNP48-203ENST00000634363 UBE2QL1A1L167 161 aa12.5□□□□□ -0.41
SNRNP48-203ENST00000634363 AIREO43918 545 aa12.5□□□□□ -0.41
SNRNP48-203ENST00000634363 IL1AP01583 271 aa12.5□□□□□ -0.41
SNRNP48-203ENST00000634363 SMIM18P0DKX4 95 aa12.5□□□□□ -0.41
SNRNP48-203ENST00000634363 CHATP28329 748 aa12.5□□□□□ -0.41
SNRNP48-203ENST00000634363 BLVRBP30043 206 aaPredicted RBP12.5□□□□□ -0.41
SNRNP48-203ENST00000634363 SDC2P34741 201 aa12.5□□□□□ -0.41
SNRNP48-203ENST00000634363 MXD1Q05195 221 aa12.5□□□□□ -0.41
SNRNP48-203ENST00000634363 C17orf58Q2M2W7 97 aa12.5□□□□□ -0.41
SNRNP48-203ENST00000634363 CCDC107Q8WV48 283 aa12.5□□□□□ -0.41
SNRNP48-203ENST00000634363 YIPF6Q96EC8 236 aa12.5□□□□□ -0.41
SNRNP48-203ENST00000634363 CENPOQ9BU64 300 aa12.5□□□□□ -0.41
SNRNP48-203ENST00000634363 CLEC7AQ9BXN2 247 aa12.5□□□□□ -0.41
SNRNP48-203ENST00000634363 MRPS26Q9BYN8 205 aaKnown RBP12.5□□□□□ -0.41
SNRNP48-203ENST00000634363 PRSS22Q9GZN4 317 aa12.5□□□□□ -0.41
SNRNP48-203ENST00000634363 LPAR5Q9H1C0 372 aa12.5□□□□□ -0.41
SNRNP48-203ENST00000634363 RAB9BQ9NP90 201 aa12.5□□□□□ -0.41
SNRNP48-203ENST00000634363 PLEKHJ1Q9NW61 149 aa12.5□□□□□ -0.41
SNRNP48-203ENST00000634363 NOTCH3Q9UM47 2321 aa12.49□□□□□ -0.41
SNRNP48-203ENST00000634363 IGHV2-26A0A0B4J1V2 119 aa12.49□□□□□ -0.41
SNRNP48-203ENST00000634363 TRAV39A0A0B4J263 110 aa12.49□□□□□ -0.41
SNRNP48-203ENST00000634363 TMEM272A0A1B0GTI8 110 aa12.49□□□□□ -0.41
SNRNP48-203ENST00000634363 MMP23AO75900 390 aa12.49□□□□□ -0.41
SNRNP48-203ENST00000634363 MT-ND4P03905 459 aa12.49□□□□□ -0.41
SNRNP48-203ENST00000634363 CD33P20138 364 aa12.49□□□□□ -0.41
SNRNP48-203ENST00000634363 GZMHP20718 246 aa12.49□□□□□ -0.41
SNRNP48-203ENST00000634363 NFYBP25208 207 aa12.49□□□□□ -0.41
SNRNP48-203ENST00000634363 SSTR5P35346 364 aa12.49□□□□□ -0.41
SNRNP48-203ENST00000634363 C6orf183Q5T699 404 aa12.49□□□□□ -0.41
SNRNP48-203ENST00000634363 FOXB2Q5VYV0 432 aa12.49□□□□□ -0.41
SNRNP48-203ENST00000634363 ZNF626Q68DY1 528 aa12.49□□□□□ -0.41
SNRNP48-203ENST00000634363 SFXN4Q6P4A7 337 aa12.49□□□□□ -0.41
SNRNP48-203ENST00000634363 Q6ZS46 218 aa12.49□□□□□ -0.41
SNRNP48-203ENST00000634363 C6orf201Q7Z4U5 140 aa12.49□□□□□ -0.41
SNRNP48-203ENST00000634363 RTN4RL2Q86UN3 420 aa12.49□□□□□ -0.41
SNRNP48-203ENST00000634363 NR2C2APQ86WQ0 139 aa12.49□□□□□ -0.41
SNRNP48-203ENST00000634363 OR11H6Q8NGC7 330 aa12.49□□□□□ -0.41
SNRNP48-203ENST00000634363 OR56B1Q8NGI3 324 aa12.49□□□□□ -0.41
SNRNP48-203ENST00000634363 RNF167Q9H6Y7 350 aa12.49□□□□□ -0.41
SNRNP48-203ENST00000634363 IDI2-AS1Q9NZ38 188 aa12.49□□□□□ -0.41
SNRNP48-203ENST00000634363 DAPK2Q9UIK4 370 aa12.49□□□□□ -0.41
SNRNP48-203ENST00000634363 RAB22AQ9UL26 194 aa12.49□□□□□ -0.41
SNRNP48-203ENST00000634363 TCF19Q9Y242 345 aa12.49□□□□□ -0.41
SNRNP48-203ENST00000634363 TBL2Q9Y4P3 447 aaKnown RBP12.49□□□□□ -0.41
SNRNP48-203ENST00000634363 A0A0A6YYD4 124 aa12.48□□□□□ -0.41
SNRNP48-203ENST00000634363 FAM172BPA6NC97 362 aa12.48□□□□□ -0.41
SNRNP48-203ENST00000634363 ODF3BA8MYP8 253 aa12.48□□□□□ -0.41
SNRNP48-203ENST00000634363 LDLRAD4O15165 306 aa12.48□□□□□ -0.41
SNRNP48-203ENST00000634363 SLC2A2P11168 524 aaPredicted RBP12.48□□□□□ -0.41
SNRNP48-203ENST00000634363 IGLL1P15814 213 aa12.48□□□□□ -0.41
SNRNP48-203ENST00000634363 RAB6AP20340 208 aa12.48□□□□□ -0.41
SNRNP48-203ENST00000634363 VEGFCP49767 419 aa12.48□□□□□ -0.41
SNRNP48-203ENST00000634363 BLCAPP62952 87 aa12.48□□□□□ -0.41
SNRNP48-203ENST00000634363 LTC4SQ16873 150 aa12.48□□□□□ -0.41
SNRNP48-203ENST00000634363 KIAA2026Q5HYC2 2103 aa12.48□□□□□ -0.41
SNRNP48-203ENST00000634363 TRAT1Q6PIZ9 186 aa12.48□□□□□ -0.41
SNRNP48-203ENST00000634363 Q8N2B8 174 aa12.48□□□□□ -0.41
SNRNP48-203ENST00000634363 ABHD12Q8N2K0 398 aa12.48□□□□□ -0.41
SNRNP48-203ENST00000634363 OR4K15Q8NH41 348 aa12.48□□□□□ -0.41
SNRNP48-203ENST00000634363 NDNFQ8TB73 568 aa12.48□□□□□ -0.41
SNRNP48-203ENST00000634363 ZNF596Q8TC21 504 aa12.48□□□□□ -0.41
SNRNP48-203ENST00000634363 MALSU1Q96EH3 234 aa12.48□□□□□ -0.41
SNRNP48-203ENST00000634363 KIRREL1Q96J84 757 aa12.48□□□□□ -0.41
SNRNP48-203ENST00000634363 SULT4A1Q9BR01 284 aa12.48□□□□□ -0.41
SNRNP48-203ENST00000634363 PITPNC1Q9UKF7 332 aa12.48□□□□□ -0.41
SNRNP48-203ENST00000634363 A0A0B4J203 849 aa12.47□□□□□ -0.41
SNRNP48-203ENST00000634363 A6NDX4 124 aa12.47□□□□□ -0.41
SNRNP48-203ENST00000634363 ADARB2-AS1A8MUL3 147 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms