RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 OR4C12Q96R67 309 aa11.34□□□□□ -0.59
PNKP-218ENST00000625299 SPATA25Q9BR10 227 aa11.34□□□□□ -0.59
PNKP-218ENST00000625299 CHCHD6Q9BRQ6 235 aa11.34□□□□□ -0.59
PNKP-218ENST00000625299 RSRP1Q9BUV0 290 aa11.34□□□□□ -0.59
PNKP-218ENST00000625299 PLECQ15149 4684 aaKnown RBP11.33□□□□□ -0.6
PNKP-218ENST00000625299 MAGEA13PA6NCF6 341 aa11.33□□□□□ -0.6
PNKP-218ENST00000625299 OR4C45A6NMZ5 311 aa11.33□□□□□ -0.6
PNKP-218ENST00000625299 G3V2T6 193 aa11.33□□□□□ -0.6
PNKP-218ENST00000625299 MAGEB3O15480 346 aa11.33□□□□□ -0.6
PNKP-218ENST00000625299 IGLV1-40P01703 118 aa11.33□□□□□ -0.6
PNKP-218ENST00000625299 T-ENOLP0DO92 83 aa11.33□□□□□ -0.6
PNKP-218ENST00000625299 BLVRBP30043 206 aaPredicted RBP11.33□□□□□ -0.6
PNKP-218ENST00000625299 CCR9P51686 369 aa11.33□□□□□ -0.6
PNKP-218ENST00000625299 ALKBH1Q13686 389 aaKnown RBP11.33□□□□□ -0.6
PNKP-218ENST00000625299 FDX2Q6P4F2 183 aa11.33□□□□□ -0.6
PNKP-218ENST00000625299 SLC25A48Q6ZT89 311 aaKnown RBP11.33□□□□□ -0.6
PNKP-218ENST00000625299 SERPINA12Q8IW75 414 aa11.33□□□□□ -0.6
PNKP-218ENST00000625299 C8orf31Q8N9H6 132 aa11.33□□□□□ -0.6
PNKP-218ENST00000625299 TSEN15Q8WW01 171 aaKnown RBP11.33□□□□□ -0.6
PNKP-218ENST00000625299 CPNE2Q96FN4 548 aaPredicted RBP11.33□□□□□ -0.6
PNKP-218ENST00000625299 C4orf36Q96KX1 117 aa11.33□□□□□ -0.6
PNKP-218ENST00000625299 RIBC2Q9H4K1 309 aa11.33□□□□□ -0.6
PNKP-218ENST00000625299 GNG12Q9UBI6 72 aa11.33□□□□□ -0.6
PNKP-218ENST00000625299 ENOPH1Q9UHY7 261 aa11.33□□□□□ -0.6
PNKP-218ENST00000625299 ST3GAL6Q9Y274 331 aa11.33□□□□□ -0.6
PNKP-218ENST00000625299 A0A1W2PN81 502 aa11.32□□□□□ -0.6
PNKP-218ENST00000625299 TCRBV3S1A0A5B6 114 aa11.32□□□□□ -0.6
PNKP-218ENST00000625299 ARSBP15848 533 aa11.32□□□□□ -0.6
PNKP-218ENST00000625299 CNTFRP26992 372 aa11.32□□□□□ -0.6
PNKP-218ENST00000625299 CHRNA7P36544 502 aa11.32□□□□□ -0.6
PNKP-218ENST00000625299 POLR2IP36954 125 aaKnown RBP11.32□□□□□ -0.6
PNKP-218ENST00000625299 TMED1Q13445 227 aa11.32□□□□□ -0.6
PNKP-218ENST00000625299 LSAMPQ13449 338 aa11.32□□□□□ -0.6
PNKP-218ENST00000625299 GALEQ14376 348 aa11.32□□□□□ -0.6
PNKP-218ENST00000625299 ATAD3CQ5T2N8 411 aa11.32□□□□□ -0.6
PNKP-218ENST00000625299 KDM4DQ6B0I6 523 aa11.32□□□□□ -0.6
PNKP-218ENST00000625299 KCTD20Q7Z5Y7 419 aa11.32□□□□□ -0.6
PNKP-218ENST00000625299 LYPD6Q86Y78 171 aa11.32□□□□□ -0.6
PNKP-218ENST00000625299 PRR18Q8N4B5 295 aa11.32□□□□□ -0.6
PNKP-218ENST00000625299 OR8J1Q8NGP2 316 aa11.32□□□□□ -0.6
PNKP-218ENST00000625299 PELI1Q96FA3 418 aa11.32□□□□□ -0.6
PNKP-218ENST00000625299 CIB1Q99828 191 aa11.32□□□□□ -0.6
PNKP-218ENST00000625299 TOLLIPQ9H0E2 274 aa11.32□□□□□ -0.6
PNKP-218ENST00000625299 DHDHQ9UQ10 334 aa11.32□□□□□ -0.6
PNKP-218ENST00000625299 IGHV7-81A0A0B4J1V7 117 aa11.31□□□□□ -0.6
PNKP-218ENST00000625299 FAM90A10PA6NDY2 464 aa11.31□□□□□ -0.6
PNKP-218ENST00000625299 AIPO00170 330 aa11.31□□□□□ -0.6
PNKP-218ENST00000625299 CDRT1O95170 752 aa11.31□□□□□ -0.6
PNKP-218ENST00000625299 IGHV3-11P01762 117 aa11.31□□□□□ -0.6
PNKP-218ENST00000625299 CSTBP04080 98 aaKnown RBP11.31□□□□□ -0.6
PNKP-218ENST00000625299 IFNA6P05013 189 aa11.31□□□□□ -0.6
PNKP-218ENST00000625299 LGALS1P09382 135 aaKnown RBP11.31□□□□□ -0.6
PNKP-218ENST00000625299 RAB3AP20336 220 aa11.31□□□□□ -0.6
PNKP-218ENST00000625299 VHLP40337 213 aa11.31□□□□□ -0.6
PNKP-218ENST00000625299 ACTBP60709 375 aa11.31□□□□□ -0.6
PNKP-218ENST00000625299 Q8N1Y9 231 aa11.31□□□□□ -0.6
PNKP-218ENST00000625299 OR51A2Q8NGJ7 313 aa11.31□□□□□ -0.6
PNKP-218ENST00000625299 ZNF251Q9BRH9 671 aa11.31□□□□□ -0.6
PNKP-218ENST00000625299 ANKRD60Q9BZ19 345 aa11.31□□□□□ -0.6
PNKP-218ENST00000625299 C19orf73Q9NVV2 129 aa11.31□□□□□ -0.6
PNKP-218ENST00000625299 ING4Q9UNL4 249 aa11.31□□□□□ -0.6
PNKP-218ENST00000625299 MRPS28Q9Y2Q9 187 aaKnown RBP11.31□□□□□ -0.6
PNKP-218ENST00000625299 A3GALT2U3KPV4 340 aa11.31□□□□□ -0.6
PNKP-218ENST00000625299 TNCP24821 2201 aa11.31□□□□□ -0.6
PNKP-218ENST00000625299 ALMS1Q8TCU4 4167 aa11.31□□□□□ -0.6
PNKP-218ENST00000625299 GEMIN2O14893 280 aaKnown RBP11.3□□□□□ -0.6
PNKP-218ENST00000625299 HSPA12AO43301 675 aa11.3□□□□□ -0.6
PNKP-218ENST00000625299 ORC5O43913 435 aa11.3□□□□□ -0.6
PNKP-218ENST00000625299 HLA-DRB1P01911 266 aa11.3□□□□□ -0.6
PNKP-218ENST00000625299 SERPINA2P20848 420 aa11.3□□□□□ -0.6
PNKP-218ENST00000625299 ZNF134P52741 427 aa11.3□□□□□ -0.6
PNKP-218ENST00000625299 ZNF137PP52743 207 aa11.3□□□□□ -0.6
PNKP-218ENST00000625299 RBM11P57052 281 aaKnown RBP11.3□□□□□ -0.6
PNKP-218ENST00000625299 CT45A1Q5HYN5 189 aa11.3□□□□□ -0.6
PNKP-218ENST00000625299 ANKRD13BQ86YJ7 626 aa11.3□□□□□ -0.6
PNKP-218ENST00000625299 ZDHHC13Q8IUH4 622 aa11.3□□□□□ -0.6
PNKP-218ENST00000625299 PARP16Q8N5Y8 322 aa11.3□□□□□ -0.6
PNKP-218ENST00000625299 ZNF439Q8NDP4 499 aa11.3□□□□□ -0.6
PNKP-218ENST00000625299 OR52N1Q8NH53 320 aa11.3□□□□□ -0.6
PNKP-218ENST00000625299 CT45A3Q8NHU0 189 aa11.3□□□□□ -0.6
PNKP-218ENST00000625299 ABHD5Q8WTS1 349 aa11.3□□□□□ -0.6
PNKP-218ENST00000625299 RITA1Q96K30 269 aa11.3□□□□□ -0.6
PNKP-218ENST00000625299 TAS2R4Q9NYW5 299 aa11.3□□□□□ -0.6
PNKP-218ENST00000625299 TRAPPC2LQ9UL33 140 aa11.3□□□□□ -0.6
PNKP-218ENST00000625299 C12orf77C9JDV5 145 aa11.29□□□□□ -0.6
PNKP-218ENST00000625299 NBR2O15453 112 aa11.29□□□□□ -0.6
PNKP-218ENST00000625299 SPINT2O43291 252 aa11.29□□□□□ -0.6
PNKP-218ENST00000625299 SOX15O60248 233 aa11.29□□□□□ -0.6
PNKP-218ENST00000625299 MT-ND4P03905 459 aa11.29□□□□□ -0.6
PNKP-218ENST00000625299 SOX2P48431 317 aa11.29□□□□□ -0.6
PNKP-218ENST00000625299 ATP6AP1Q15904 470 aa11.29□□□□□ -0.6
PNKP-218ENST00000625299 HAGHQ16775 308 aa11.29□□□□□ -0.6
PNKP-218ENST00000625299 Q3ZCU0 254 aa11.29□□□□□ -0.6
PNKP-218ENST00000625299 LIN54Q6MZP7 749 aa11.29□□□□□ -0.6
PNKP-218ENST00000625299 STX19Q8N4C7 294 aa11.29□□□□□ -0.6
PNKP-218ENST00000625299 MINDY2Q8NBR6 621 aa11.29□□□□□ -0.6
PNKP-218ENST00000625299 OR1L1Q8NH94 360 aa11.29□□□□□ -0.6
PNKP-218ENST00000625299 PDCD1LG2Q9BQ51 273 aa11.29□□□□□ -0.6
PNKP-218ENST00000625299 ELOVL1Q9BW60 279 aa11.29□□□□□ -0.6
PNKP-218ENST00000625299 GABARAPL1Q9H0R8 117 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms