RNA–Protein interactions for RNA: ENST00000620394.1

SRRT-218, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-218ENST00000620394 MRPS28Q9Y2Q9 187 aaKnown RBP17.4■□□□□ 0.38
SRRT-218ENST00000620394 EFCAB10A6NFE3 127 aa17.39■□□□□ 0.37
SRRT-218ENST00000620394 CCRL2O00421 344 aa17.39■□□□□ 0.37
SRRT-218ENST00000620394 GAPDHP04406 335 aaKnown RBP17.39■□□□□ 0.37
SRRT-218ENST00000620394 ZNF137PP52743 207 aa17.39■□□□□ 0.37
SRRT-218ENST00000620394 RPL23AP62750 156 aaKnown RBP17.39■□□□□ 0.37
SRRT-218ENST00000620394 ZNF329Q86UD4 541 aa17.39■□□□□ 0.37
SRRT-218ENST00000620394 ZNF439Q8NDP4 499 aa17.39■□□□□ 0.37
SRRT-218ENST00000620394 TMEM104Q8NE00 496 aa17.39■□□□□ 0.37
SRRT-218ENST00000620394 NEK7Q8TDX7 302 aa17.39■□□□□ 0.37
SRRT-218ENST00000620394 NOL4LQ96MY1 436 aaPredicted RBP17.39■□□□□ 0.37
SRRT-218ENST00000620394 DERL3Q96Q80 235 aa17.39■□□□□ 0.37
SRRT-218ENST00000620394 FAM90A10PA6NDY2 464 aa17.38■□□□□ 0.37
SRRT-218ENST00000620394 FAM90A7PA6NKC0 464 aa17.38■□□□□ 0.37
SRRT-218ENST00000620394 FAM90A23PA8MXZ1 464 aa17.38■□□□□ 0.37
SRRT-218ENST00000620394 SC5DO75845 299 aa17.38■□□□□ 0.37
SRRT-218ENST00000620394 GNAO1P09471 354 aa17.38■□□□□ 0.37
SRRT-218ENST00000620394 SLC6A1P30531 599 aa17.38■□□□□ 0.37
SRRT-218ENST00000620394 DOC2BQ14184 412 aa17.38■□□□□ 0.37
SRRT-218ENST00000620394 HNF4GQ14541 408 aa17.38■□□□□ 0.37
SRRT-218ENST00000620394 GLIPR1L1Q6UWM5 242 aa17.38■□□□□ 0.37
SRRT-218ENST00000620394 TGIF2LXQ8IUE1 241 aa17.38■□□□□ 0.37
SRRT-218ENST00000620394 STX19Q8N4C7 294 aa17.38■□□□□ 0.37
SRRT-218ENST00000620394 JAGN1Q8N5M9 183 aa17.38■□□□□ 0.37
SRRT-218ENST00000620394 UBALD1Q8TB05 177 aa17.38■□□□□ 0.37
SRRT-218ENST00000620394 CCDC107Q8WV48 283 aa17.38■□□□□ 0.37
SRRT-218ENST00000620394 RTN4IP1Q8WWV3 396 aaPredicted RBP17.38■□□□□ 0.37
SRRT-218ENST00000620394 EAF1Q96JC9 268 aaPredicted RBP17.38■□□□□ 0.37
SRRT-218ENST00000620394 PLCXD1Q9NUJ7 323 aa17.38■□□□□ 0.37
SRRT-218ENST00000620394 PSORS1C1Q9UIG5 152 aa17.38■□□□□ 0.37
SRRT-218ENST00000620394 C12orf77C9JDV5 145 aa17.37■□□□□ 0.37
SRRT-218ENST00000620394 NHLRC4P0CG21 123 aaPredicted RBP17.37■□□□□ 0.37
SRRT-218ENST00000620394 IL3RAP26951 378 aa17.37■□□□□ 0.37
SRRT-218ENST00000620394 CAPGP40121 348 aa17.37■□□□□ 0.37
SRRT-218ENST00000620394 REG1BP48304 166 aa17.37■□□□□ 0.37
SRRT-218ENST00000620394 RCN1Q15293 331 aa17.37■□□□□ 0.37
SRRT-218ENST00000620394 AWAT2Q6E213 333 aa17.37■□□□□ 0.37
SRRT-218ENST00000620394 FAM53AQ6NSI3 398 aaPredicted RBP17.37■□□□□ 0.37
SRRT-218ENST00000620394 SLC25A48Q6ZT89 311 aaKnown RBP17.37■□□□□ 0.37
SRRT-218ENST00000620394 SLC35E3Q7Z769 313 aa17.37■□□□□ 0.37
SRRT-218ENST00000620394 C8orf59Q8N0T1 100 aaPredicted RBP17.37■□□□□ 0.37
SRRT-218ENST00000620394 COMMD1Q8N668 190 aa17.37■□□□□ 0.37
SRRT-218ENST00000620394 NKAIN3Q8N8D7 197 aa17.37■□□□□ 0.37
SRRT-218ENST00000620394 OR51D1Q8NGF3 324 aa17.37■□□□□ 0.37
SRRT-218ENST00000620394 THRSPQ92748 146 aa17.37■□□□□ 0.37
SRRT-218ENST00000620394 MCRIP2Q9BUT9 160 aaKnown RBP17.37■□□□□ 0.37
SRRT-218ENST00000620394 RAB9BQ9NP90 201 aa17.37■□□□□ 0.37
SRRT-218ENST00000620394 LIN7CQ9NUP9 197 aaKnown RBP17.37■□□□□ 0.37
SRRT-218ENST00000620394 U3KQK5 164 aa17.37■□□□□ 0.37
SRRT-218ENST00000620394 IGHV3-43A0A0B4J1X8 118 aa17.36■□□□□ 0.37
SRRT-218ENST00000620394 SERPINE3A8MV23 424 aa17.36■□□□□ 0.37
SRRT-218ENST00000620394 MCRIP1C9JLW8 97 aa17.36■□□□□ 0.37
SRRT-218ENST00000620394 TXNL1O43396 289 aa17.36■□□□□ 0.37
SRRT-218ENST00000620394 CA11O75493 328 aa17.36■□□□□ 0.37
SRRT-218ENST00000620394 IGHV3-43DP0DP04 118 aa17.36■□□□□ 0.37
SRRT-218ENST00000620394 WNT4P56705 351 aa17.36■□□□□ 0.37
SRRT-218ENST00000620394 C6orf183Q5T699 404 aa17.36■□□□□ 0.37
SRRT-218ENST00000620394 RAB12Q6IQ22 244 aa17.36■□□□□ 0.37
SRRT-218ENST00000620394 OR2W3Q7Z3T1 314 aa17.36■□□□□ 0.37
SRRT-218ENST00000620394 MOB3BQ86TA1 216 aa17.36■□□□□ 0.37
SRRT-218ENST00000620394 FOXRED2Q8IWF2 684 aa17.36■□□□□ 0.37
SRRT-218ENST00000620394 STPG2Q8N412 459 aa17.36■□□□□ 0.37
SRRT-218ENST00000620394 Q96M66 194 aa17.36■□□□□ 0.37
SRRT-218ENST00000620394 ZFP57Q9NU63 452 aa17.36■□□□□ 0.37
SRRT-218ENST00000620394 FKBP14Q9NWM8 211 aa17.36■□□□□ 0.37
SRRT-218ENST00000620394 ETAA1Q9NY74 926 aa17.36■□□□□ 0.37
SRRT-218ENST00000620394 ZMAT5Q9UDW3 170 aaKnown RBP17.36■□□□□ 0.37
SRRT-218ENST00000620394 IGHV3-72A0A0B4J1Y9 119 aa17.35■□□□□ 0.37
SRRT-218ENST00000620394 PNMA8CA0A1B0GUJ8 204 aa17.35■□□□□ 0.37
SRRT-218ENST00000620394 A0A1W2PPK0 400 aa17.35■□□□□ 0.37
SRRT-218ENST00000620394 MYL12BO14950 172 aa17.35■□□□□ 0.37
SRRT-218ENST00000620394 CASQ2O14958 399 aaPredicted RBP17.35■□□□□ 0.37
SRRT-218ENST00000620394 SLC31A2O15432 143 aa17.35■□□□□ 0.37
SRRT-218ENST00000620394 GLAP06280 429 aa17.35■□□□□ 0.37
SRRT-218ENST00000620394 MGMTP16455 207 aa17.35■□□□□ 0.37
SRRT-218ENST00000620394 CELP19835 753 aa17.35■□□□□ 0.37
SRRT-218ENST00000620394 CD1BP29016 333 aa17.35■□□□□ 0.37
SRRT-218ENST00000620394 THBS3P49746 956 aa17.35■□□□□ 0.37
SRRT-218ENST00000620394 SYT6Q5T7P8 510 aaPredicted RBP17.35■□□□□ 0.37
SRRT-218ENST00000620394 OGFRL1Q5TC84 451 aaPredicted RBP17.35■□□□□ 0.37
SRRT-218ENST00000620394 SIGIRRQ6IA17 410 aa17.35■□□□□ 0.37
SRRT-218ENST00000620394 TRAT1Q6PIZ9 186 aa17.35■□□□□ 0.37
SRRT-218ENST00000620394 AHSA2Q719I0 299 aa17.35■□□□□ 0.37
SRRT-218ENST00000620394 MRPL41Q8IXM3 137 aaKnown RBP17.35■□□□□ 0.37
SRRT-218ENST00000620394 Q8N9W7 124 aa17.35■□□□□ 0.37
SRRT-218ENST00000620394 OR2T10Q8NGZ9 312 aa17.35■□□□□ 0.37
SRRT-218ENST00000620394 UQCC2Q9BRT2 126 aa17.35■□□□□ 0.37
SRRT-218ENST00000620394 ABCG5Q9H222 651 aa17.35■□□□□ 0.37
SRRT-218ENST00000620394 TRAPPC2LQ9UL33 140 aa17.35■□□□□ 0.37
SRRT-218ENST00000620394 AP4M1O00189 453 aa17.34■□□□□ 0.37
SRRT-218ENST00000620394 SPINT2O43291 252 aa17.34■□□□□ 0.37
SRRT-218ENST00000620394 MAS1P04201 325 aa17.34■□□□□ 0.37
SRRT-218ENST00000620394 MAPK3P27361 379 aaPredicted RBP17.34■□□□□ 0.37
SRRT-218ENST00000620394 GPR12P47775 334 aa17.34■□□□□ 0.37
SRRT-218ENST00000620394 SLC35B1P78383 322 aa17.34■□□□□ 0.37
SRRT-218ENST00000620394 OR4K15Q8NH41 348 aa17.34■□□□□ 0.37
SRRT-218ENST00000620394 PLSCR3Q9NRY6 295 aa17.34■□□□□ 0.37
SRRT-218ENST00000620394 MBNL3Q9NUK0 354 aaKnown RBP17.34■□□□□ 0.37
SRRT-218ENST00000620394 C3orf84H3BNL1 204 aa17.33■□□□□ 0.36
SRRT-218ENST00000620394 HBZP02008 142 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms