RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 PACRGLQ8N7B6 248 aa3.45□□□□□ -1.86
LINC00397-202ENST00000606785 COX18Q8N8Q8 333 aa3.45□□□□□ -1.86
LINC00397-202ENST00000606785 OR4P4Q8NGL7 312 aa3.45□□□□□ -1.86
LINC00397-202ENST00000606785 OR13C4Q8NGS5 318 aa3.45□□□□□ -1.86
LINC00397-202ENST00000606785 SKA2Q8WVK7 121 aaPredicted RBP3.45□□□□□ -1.86
LINC00397-202ENST00000606785 RORBQ92753 470 aa3.45□□□□□ -1.86
LINC00397-202ENST00000606785 CMBLQ96DG6 245 aa3.45□□□□□ -1.86
LINC00397-202ENST00000606785 SLIRPQ9GZT3 109 aaKnown RBP3.45□□□□□ -1.86
LINC00397-202ENST00000606785 CHRNA10Q9GZZ6 450 aa3.45□□□□□ -1.86
LINC00397-202ENST00000606785 TXNIPQ9H3M7 391 aa3.45□□□□□ -1.86
LINC00397-202ENST00000606785 Q9H521 79 aa3.45□□□□□ -1.86
LINC00397-202ENST00000606785 CACYBPQ9HB71 228 aaKnown RBP3.45□□□□□ -1.86
LINC00397-202ENST00000606785 PDFQ9HBH1 243 aa3.45□□□□□ -1.86
LINC00397-202ENST00000606785 C14orf105Q9NVL8 296 aa3.45□□□□□ -1.86
LINC00397-202ENST00000606785 VPREB3Q9UKI3 123 aa3.45□□□□□ -1.86
LINC00397-202ENST00000606785 CES1P1Q9UKY3 287 aa3.45□□□□□ -1.86
LINC00397-202ENST00000606785 SNX12Q9UMY4 172 aa3.45□□□□□ -1.86
LINC00397-202ENST00000606785 ZFP30Q9Y2G7 519 aa3.45□□□□□ -1.86
LINC00397-202ENST00000606785 UFC1Q9Y3C8 167 aa3.45□□□□□ -1.86
LINC00397-202ENST00000606785 MTCH2Q9Y6C9 303 aa3.45□□□□□ -1.86
LINC00397-202ENST00000606785 EIF4G3O43432 1585 aaKnown RBP3.45□□□□□ -1.86
LINC00397-202ENST00000606785 ASTN1O14525 1302 aa3.44□□□□□ -1.86
LINC00397-202ENST00000606785 SETD1AO15047 1707 aaKnown RBP3.44□□□□□ -1.86
LINC00397-202ENST00000606785 AKAP11Q9UKA4 1901 aa3.44□□□□□ -1.86
LINC00397-202ENST00000606785 GRIN2BQ13224 1484 aa3.44□□□□□ -1.86
LINC00397-202ENST00000606785 TGIF2-C20orf24A0A0A6YYL0 155 aa3.44□□□□□ -1.86
LINC00397-202ENST00000606785 A0A0B4J2E0 115 aa3.44□□□□□ -1.86
LINC00397-202ENST00000606785 IGHV3-66A0A0C4DH42 116 aa3.44□□□□□ -1.86
LINC00397-202ENST00000606785 SMIM9A6NGZ8 99 aa3.44□□□□□ -1.86
LINC00397-202ENST00000606785 OR5H14A6NHG9 310 aa3.44□□□□□ -1.86
LINC00397-202ENST00000606785 TRIM49D1C9J1S8 452 aa3.44□□□□□ -1.86
LINC00397-202ENST00000606785 CLDN25C9JDP6 229 aa3.44□□□□□ -1.86
LINC00397-202ENST00000606785 F6UZH7 168 aa3.44□□□□□ -1.86
LINC00397-202ENST00000606785 INS-IGF2F8WCM5 200 aa3.44□□□□□ -1.86
LINC00397-202ENST00000606785 FAAHO00519 579 aa3.44□□□□□ -1.86
LINC00397-202ENST00000606785 COPEO14579 308 aa3.44□□□□□ -1.86
LINC00397-202ENST00000606785 GYG2O15488 501 aa3.44□□□□□ -1.86
LINC00397-202ENST00000606785 TRAPPC6AO75865 159 aa3.44□□□□□ -1.86
LINC00397-202ENST00000606785 HLA-AP01891 365 aaKnown RBP3.44□□□□□ -1.86
LINC00397-202ENST00000606785 SERPINA7P05543 415 aa3.44□□□□□ -1.86
LINC00397-202ENST00000606785 CTSLP07711 333 aa3.44□□□□□ -1.86
LINC00397-202ENST00000606785 RHOCP08134 193 aa3.44□□□□□ -1.86
LINC00397-202ENST00000606785 C8orf88P0DMB2 117 aa3.44□□□□□ -1.86
LINC00397-202ENST00000606785 HIST1H1EP10412 219 aaKnown RBP3.44□□□□□ -1.86
LINC00397-202ENST00000606785 IGFBP3P17936 291 aaPredicted RBP3.44□□□□□ -1.86
LINC00397-202ENST00000606785 GPX2P18283 190 aa3.44□□□□□ -1.86
LINC00397-202ENST00000606785 ARL2P36404 184 aa3.44□□□□□ -1.86
LINC00397-202ENST00000606785 MYCNOSP40205 109 aa3.44□□□□□ -1.86
LINC00397-202ENST00000606785 DNASE1L1P49184 302 aa3.44□□□□□ -1.86
LINC00397-202ENST00000606785 RAB5CP51148 216 aa3.44□□□□□ -1.86
LINC00397-202ENST00000606785 UBE2E1P51965 193 aa3.44□□□□□ -1.86
LINC00397-202ENST00000606785 SYNJ2BPP57105 145 aa3.44□□□□□ -1.86
LINC00397-202ENST00000606785 TBPL1P62380 186 aa3.44□□□□□ -1.86
LINC00397-202ENST00000606785 RPL18AQ02543 176 aaKnown RBP3.44□□□□□ -1.86
LINC00397-202ENST00000606785 C2orf80Q0P641 193 aa3.44□□□□□ -1.86
LINC00397-202ENST00000606785 INCA1Q0VD86 236 aa3.44□□□□□ -1.86
LINC00397-202ENST00000606785 SURF2Q15527 256 aaPredicted RBP3.44□□□□□ -1.86
LINC00397-202ENST00000606785 CPTPQ5TA50 214 aa3.44□□□□□ -1.86
LINC00397-202ENST00000606785 FAM78BQ5VT40 261 aa3.44□□□□□ -1.86
LINC00397-202ENST00000606785 STEAP4Q687X5 459 aa3.44□□□□□ -1.86
LINC00397-202ENST00000606785 BAP18Q8IXM2 172 aa3.44□□□□□ -1.86
LINC00397-202ENST00000606785 CPNE9Q8IYJ1 553 aa3.44□□□□□ -1.86
LINC00397-202ENST00000606785 OR2Y1Q8NGV0 311 aa3.44□□□□□ -1.86
LINC00397-202ENST00000606785 DCAKDQ8WVC6 231 aa3.44□□□□□ -1.86
LINC00397-202ENST00000606785 ACOT12Q8WYK0 555 aa3.44□□□□□ -1.86
LINC00397-202ENST00000606785 UBE2E2Q96LR5 201 aa3.44□□□□□ -1.86
LINC00397-202ENST00000606785 CHAC1Q9BUX1 264 aa3.44□□□□□ -1.86
LINC00397-202ENST00000606785 NUDT9Q9BW91 350 aa3.44□□□□□ -1.86
LINC00397-202ENST00000606785 MS4A8Q9BY19 250 aa3.44□□□□□ -1.86
LINC00397-202ENST00000606785 CHST5Q9GZS9 411 aa3.44□□□□□ -1.86
LINC00397-202ENST00000606785 ARL6Q9H0F7 186 aa3.44□□□□□ -1.86
LINC00397-202ENST00000606785 CALML5Q9NZT1 146 aa3.44□□□□□ -1.86
LINC00397-202ENST00000606785 JPT1Q9UK76 154 aa3.44□□□□□ -1.86
LINC00397-202ENST00000606785 SLC35A3Q9Y2D2 325 aa3.44□□□□□ -1.86
LINC00397-202ENST00000606785 OR51B2Q9Y5P1 312 aa3.44□□□□□ -1.86
LINC00397-202ENST00000606785 UBIAD1Q9Y5Z9 338 aa3.44□□□□□ -1.86
LINC00397-202ENST00000606785 SMAD5-AS1Q9Y6J3 95 aa3.44□□□□□ -1.86
LINC00397-202ENST00000606785 KDM5DQ9BY66 1539 aa3.44□□□□□ -1.86
LINC00397-202ENST00000606785 TRAPPC8Q9Y2L5 1435 aa3.44□□□□□ -1.86
LINC00397-202ENST00000606785 ABCB11O95342 1321 aa3.44□□□□□ -1.86
LINC00397-202ENST00000606785 PALLDQ8WX93 1383 aa3.43□□□□□ -1.86
LINC00397-202ENST00000606785 A0A096LPI6 279 aa3.43□□□□□ -1.86
LINC00397-202ENST00000606785 A0A0J9YXV3 536 aa3.43□□□□□ -1.86
LINC00397-202ENST00000606785 ARL5CA6NH57 179 aa3.43□□□□□ -1.86
LINC00397-202ENST00000606785 A8MWP6 167 aa3.43□□□□□ -1.86
LINC00397-202ENST00000606785 C1orf196B1AJZ1 125 aa3.43□□□□□ -1.86
LINC00397-202ENST00000606785 MPZL1O95297 269 aa3.43□□□□□ -1.86
LINC00397-202ENST00000606785 SLC25A27O95847 323 aa3.43□□□□□ -1.86
LINC00397-202ENST00000606785 IFNA1P01562 189 aa3.43□□□□□ -1.86
LINC00397-202ENST00000606785 IFNA7P01567 189 aa3.43□□□□□ -1.86
LINC00397-202ENST00000606785 CD74P04233 296 aa3.43□□□□□ -1.86
LINC00397-202ENST00000606785 HCCSP53701 268 aa3.43□□□□□ -1.86
LINC00397-202ENST00000606785 RAB25P57735 213 aa3.43□□□□□ -1.86
LINC00397-202ENST00000606785 RHOAP61586 193 aa3.43□□□□□ -1.86
LINC00397-202ENST00000606785 GNG3P63215 75 aa3.43□□□□□ -1.86
LINC00397-202ENST00000606785 ARG2P78540 354 aa3.43□□□□□ -1.86
LINC00397-202ENST00000606785 ST3GAL4Q11206 333 aa3.43□□□□□ -1.86
LINC00397-202ENST00000606785 ERCC8Q13216 396 aa3.43□□□□□ -1.86
LINC00397-202ENST00000606785 ORMDL2Q53FV1 153 aa3.43□□□□□ -1.86
LINC00397-202ENST00000606785 SPIN4Q56A73 249 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms