RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 RNF114Q9Y508 228 aa7.05□□□□□ -1.28
SSBP4-208ENST00000600628 PEX16Q9Y5Y5 336 aa7.05□□□□□ -1.28
SSBP4-208ENST00000600628 TRAV39A0A0B4J263 110 aa7.04□□□□□ -1.28
SSBP4-208ENST00000600628 A0A1W2PPI3 338 aa7.04□□□□□ -1.28
SSBP4-208ENST00000600628 LEUTXA8MZ59 168 aa7.04□□□□□ -1.28
SSBP4-208ENST00000600628 MCRIP1C9JLW8 97 aa7.04□□□□□ -1.28
SSBP4-208ENST00000600628 RCC1P18754 421 aaPredicted RBP7.04□□□□□ -1.28
SSBP4-208ENST00000600628 CALRP27797 417 aaKnown RBP7.04□□□□□ -1.28
SSBP4-208ENST00000600628 RAB13P51153 203 aa7.04□□□□□ -1.28
SSBP4-208ENST00000600628 PSMD7P51665 324 aa7.04□□□□□ -1.28
SSBP4-208ENST00000600628 SRSF4Q08170 494 aaKnown RBP7.04□□□□□ -1.28
SSBP4-208ENST00000600628 ZNF816Q0VGE8 651 aaPredicted RBP7.04□□□□□ -1.28
SSBP4-208ENST00000600628 PLA2G7Q13093 441 aa7.04□□□□□ -1.28
SSBP4-208ENST00000600628 EBI3Q14213 229 aa7.04□□□□□ -1.28
SSBP4-208ENST00000600628 ATAD3CQ5T2N8 411 aa7.04□□□□□ -1.28
SSBP4-208ENST00000600628 TPTE2P1Q5T6R2 138 aa7.04□□□□□ -1.28
SSBP4-208ENST00000600628 SLC25A48Q6ZT89 311 aaKnown RBP7.04□□□□□ -1.28
SSBP4-208ENST00000600628 THNSL2Q86YJ6 484 aa7.04□□□□□ -1.28
SSBP4-208ENST00000600628 RFESDQ8TAC1 157 aa7.04□□□□□ -1.28
SSBP4-208ENST00000600628 FAM46BQ96A09 425 aa7.04□□□□□ -1.28
SSBP4-208ENST00000600628 NICN1Q9BSH3 213 aa7.04□□□□□ -1.28
SSBP4-208ENST00000600628 TMEM59Q9BXS4 323 aa7.04□□□□□ -1.28
SSBP4-208ENST00000600628 RAB18Q9NP72 206 aa7.04□□□□□ -1.28
SSBP4-208ENST00000600628 SERTAD4Q9NUC0 356 aa7.04□□□□□ -1.28
SSBP4-208ENST00000600628 GFOD1Q9NXC2 390 aa7.04□□□□□ -1.28
SSBP4-208ENST00000600628 AK6Q9Y3D8 172 aaKnown RBP7.04□□□□□ -1.28
SSBP4-208ENST00000600628 V9GY05 133 aa7.04□□□□□ -1.28
SSBP4-208ENST00000600628 FAM172BPA6NC97 362 aa7.03□□□□□ -1.28
SSBP4-208ENST00000600628 IFITM5A6NNB3 132 aa7.03□□□□□ -1.28
SSBP4-208ENST00000600628 AIPO00170 330 aa7.03□□□□□ -1.28
SSBP4-208ENST00000600628 MPIG6BO95866 241 aa7.03□□□□□ -1.28
SSBP4-208ENST00000600628 ZNF134P52741 427 aa7.03□□□□□ -1.28
SSBP4-208ENST00000600628 PRRX1P54821 245 aa7.03□□□□□ -1.28
SSBP4-208ENST00000600628 HTD2P86397 168 aa7.03□□□□□ -1.28
SSBP4-208ENST00000600628 DYNC1I2Q13409 638 aaKnown RBP7.03□□□□□ -1.28
SSBP4-208ENST00000600628 DIAPH2-AS1Q14236 149 aa7.03□□□□□ -1.28
SSBP4-208ENST00000600628 HMGN3Q15651 99 aa7.03□□□□□ -1.28
SSBP4-208ENST00000600628 LY6EQ16553 131 aa7.03□□□□□ -1.28
SSBP4-208ENST00000600628 FAM53AQ6NSI3 398 aaPredicted RBP7.03□□□□□ -1.28
SSBP4-208ENST00000600628 TRAT1Q6PIZ9 186 aa7.03□□□□□ -1.28
SSBP4-208ENST00000600628 C16orf82Q7Z2V1 217 aa7.03□□□□□ -1.28
SSBP4-208ENST00000600628 C6orf201Q7Z4U5 140 aa7.03□□□□□ -1.28
SSBP4-208ENST00000600628 Q8N6K4 173 aa7.03□□□□□ -1.28
SSBP4-208ENST00000600628 ARL11Q969Q4 196 aa7.03□□□□□ -1.28
SSBP4-208ENST00000600628 PTX4Q96A99 478 aa7.03□□□□□ -1.28
SSBP4-208ENST00000600628 FAM3DQ96BQ1 224 aa7.03□□□□□ -1.28
SSBP4-208ENST00000600628 OCSTAMPQ9BR26 566 aa7.03□□□□□ -1.28
SSBP4-208ENST00000600628 WNT10AQ9GZT5 417 aa7.03□□□□□ -1.28
SSBP4-208ENST00000600628 TXNL4BQ9NX01 149 aaKnown RBP7.03□□□□□ -1.28
SSBP4-208ENST00000600628 ETAA1Q9NY74 926 aa7.03□□□□□ -1.28
SSBP4-208ENST00000600628 STEAP1Q9UHE8 339 aa7.03□□□□□ -1.28
SSBP4-208ENST00000600628 PITPNC1Q9UKF7 332 aa7.03□□□□□ -1.28
SSBP4-208ENST00000600628 KCNK7Q9Y2U2 307 aa7.03□□□□□ -1.28
SSBP4-208ENST00000600628 HILPDAQ9Y5L2 63 aa7.03□□□□□ -1.28
SSBP4-208ENST00000600628 TMEM272A0A1B0GTI8 110 aa7.02□□□□□ -1.29
SSBP4-208ENST00000600628 RAB27BO00194 218 aa7.02□□□□□ -1.29
SSBP4-208ENST00000600628 SOCS1O15524 211 aa7.02□□□□□ -1.29
SSBP4-208ENST00000600628 HBZP02008 142 aa7.02□□□□□ -1.29
SSBP4-208ENST00000600628 ARSBP15848 533 aa7.02□□□□□ -1.29
SSBP4-208ENST00000600628 CEACAM3P40198 252 aa7.02□□□□□ -1.29
SSBP4-208ENST00000600628 OR10A3P58181 314 aa7.02□□□□□ -1.29
SSBP4-208ENST00000600628 P2RY14Q15391 338 aa7.02□□□□□ -1.29
SSBP4-208ENST00000600628 FAM189A2Q15884 450 aa7.02□□□□□ -1.29
SSBP4-208ENST00000600628 RAB11BQ15907 218 aa7.02□□□□□ -1.29
SSBP4-208ENST00000600628 C2orf76Q3KRA6 126 aa7.02□□□□□ -1.29
SSBP4-208ENST00000600628 CT45A1Q5HYN5 189 aa7.02□□□□□ -1.29
SSBP4-208ENST00000600628 PLAC9Q5JTB6 97 aa7.02□□□□□ -1.29
SSBP4-208ENST00000600628 C6orf183Q5T699 404 aa7.02□□□□□ -1.29
SSBP4-208ENST00000600628 C11orf88Q6PI97 169 aa7.02□□□□□ -1.29
SSBP4-208ENST00000600628 Q6ZS46 218 aa7.02□□□□□ -1.29
SSBP4-208ENST00000600628 ODF3L1Q8IXM7 274 aa7.02□□□□□ -1.29
SSBP4-208ENST00000600628 OR8H3Q8N146 312 aa7.02□□□□□ -1.29
SSBP4-208ENST00000600628 OR51D1Q8NGF3 324 aa7.02□□□□□ -1.29
SSBP4-208ENST00000600628 CT45A3Q8NHU0 189 aa7.02□□□□□ -1.29
SSBP4-208ENST00000600628 LEAP2Q969E1 77 aa7.02□□□□□ -1.29
SSBP4-208ENST00000600628 TOLLIPQ9H0E2 274 aa7.02□□□□□ -1.29
SSBP4-208ENST00000600628 LIN7BQ9HAP6 207 aa7.02□□□□□ -1.29
SSBP4-208ENST00000600628 ING3Q9NXR8 418 aa7.02□□□□□ -1.29
SSBP4-208ENST00000600628 STUB1Q9UNE7 303 aa7.02□□□□□ -1.29
SSBP4-208ENST00000600628 UBE2QL1A1L167 161 aa7.01□□□□□ -1.29
SSBP4-208ENST00000600628 ITGB1BP1O14713 200 aa7.01□□□□□ -1.29
SSBP4-208ENST00000600628 TIMM23O14925 209 aa7.01□□□□□ -1.29
SSBP4-208ENST00000600628 SLC31A2O15432 143 aa7.01□□□□□ -1.29
SSBP4-208ENST00000600628 YPEL1O60688 119 aa7.01□□□□□ -1.29
SSBP4-208ENST00000600628 OR2F2O95006 317 aa7.01□□□□□ -1.29
SSBP4-208ENST00000600628 RAB6AP20340 208 aa7.01□□□□□ -1.29
SSBP4-208ENST00000600628 NFYBP25208 207 aa7.01□□□□□ -1.29
SSBP4-208ENST00000600628 BLVRBP30043 206 aaPredicted RBP7.01□□□□□ -1.29
SSBP4-208ENST00000600628 RANBP1P43487 201 aa7.01□□□□□ -1.29
SSBP4-208ENST00000600628 RAB7AP51149 207 aa7.01□□□□□ -1.29
SSBP4-208ENST00000600628 CLDN12P56749 244 aa7.01□□□□□ -1.29
SSBP4-208ENST00000600628 BLCAPP62952 87 aa7.01□□□□□ -1.29
SSBP4-208ENST00000600628 MADCAM1Q13477 382 aa7.01□□□□□ -1.29
SSBP4-208ENST00000600628 MORN2Q502X0 79 aa7.01□□□□□ -1.29
SSBP4-208ENST00000600628 PLA1AQ53H76 456 aa7.01□□□□□ -1.29
SSBP4-208ENST00000600628 C22orf42Q6IC83 251 aa7.01□□□□□ -1.29
SSBP4-208ENST00000600628 CCDC144NLQ6NUI1 221 aa7.01□□□□□ -1.29
SSBP4-208ENST00000600628 TREML4Q6UXN2 200 aa7.01□□□□□ -1.29
SSBP4-208ENST00000600628 C5orf24Q7Z6I8 188 aa7.01□□□□□ -1.29
SSBP4-208ENST00000600628 TPRA1Q86W33 373 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms