RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 SDCBPO00560 298 aaPredicted RBP13.97□□□□□ -0.17
SHKBP1-212ENST00000596163 RAG2P55895 527 aa13.97□□□□□ -0.17
SHKBP1-212ENST00000596163 LY6EQ16553 131 aa13.97□□□□□ -0.17
SHKBP1-212ENST00000596163 Q3ZCU0 254 aa13.97□□□□□ -0.17
SHKBP1-212ENST00000596163 CCDC144NLQ6NUI1 221 aa13.97□□□□□ -0.17
SHKBP1-212ENST00000596163 Q6ZTK2 550 aa13.97□□□□□ -0.17
SHKBP1-212ENST00000596163 C6orf201Q7Z4U5 140 aa13.97□□□□□ -0.17
SHKBP1-212ENST00000596163 SULT4A1Q9BR01 284 aa13.97□□□□□ -0.17
SHKBP1-212ENST00000596163 CHMP1AQ9HD42 196 aaPredicted RBP13.97□□□□□ -0.17
SHKBP1-212ENST00000596163 PSG11Q9UQ72 335 aa13.97□□□□□ -0.17
SHKBP1-212ENST00000596163 MMP24Q9Y5R2 645 aa13.97□□□□□ -0.17
SHKBP1-212ENST00000596163 DNHD1Q96M86 4753 aa13.96□□□□□ -0.17
SHKBP1-212ENST00000596163 DSCAML1Q8TD84 2053 aa13.96□□□□□ -0.17
SHKBP1-212ENST00000596163 LOC100506127A0A0U1RQW1 187 aa13.96□□□□□ -0.17
SHKBP1-212ENST00000596163 TMEM272A0A1B0GTI8 110 aa13.96□□□□□ -0.17
SHKBP1-212ENST00000596163 METTL21EPA6NDL7 271 aa13.96□□□□□ -0.17
SHKBP1-212ENST00000596163 C12orf77C9JDV5 145 aa13.96□□□□□ -0.17
SHKBP1-212ENST00000596163 F2RL2O00254 374 aa13.96□□□□□ -0.17
SHKBP1-212ENST00000596163 LDLRAD4O15165 306 aa13.96□□□□□ -0.17
SHKBP1-212ENST00000596163 SOCS1O15524 211 aa13.96□□□□□ -0.17
SHKBP1-212ENST00000596163 RAB6AP20340 208 aa13.96□□□□□ -0.17
SHKBP1-212ENST00000596163 GADD45AP24522 165 aa13.96□□□□□ -0.17
SHKBP1-212ENST00000596163 MNDAP41218 407 aa13.96□□□□□ -0.17
SHKBP1-212ENST00000596163 VEGFCP49767 419 aa13.96□□□□□ -0.17
SHKBP1-212ENST00000596163 PLA1AQ53H76 456 aa13.96□□□□□ -0.17
SHKBP1-212ENST00000596163 LDLRAD2Q5SZI1 272 aa13.96□□□□□ -0.17
SHKBP1-212ENST00000596163 DYNAPQ8N1N2 210 aa13.96□□□□□ -0.17
SHKBP1-212ENST00000596163 MRPL30Q8TCC3 161 aaKnown RBP13.96□□□□□ -0.17
SHKBP1-212ENST00000596163 PTX4Q96A99 478 aa13.96□□□□□ -0.17
SHKBP1-212ENST00000596163 LIN7BQ9HAP6 207 aa13.96□□□□□ -0.17
SHKBP1-212ENST00000596163 TAF9BQ9HBM6 251 aa13.96□□□□□ -0.17
SHKBP1-212ENST00000596163 MBNL3Q9NUK0 354 aaKnown RBP13.96□□□□□ -0.17
SHKBP1-212ENST00000596163 GFOD1Q9NXC2 390 aa13.96□□□□□ -0.17
SHKBP1-212ENST00000596163 A0A0A6YYD4 124 aa13.95□□□□□ -0.18
SHKBP1-212ENST00000596163 HBZP02008 142 aa13.95□□□□□ -0.18
SHKBP1-212ENST00000596163 JUNBP17275 347 aaPredicted RBP13.95□□□□□ -0.18
SHKBP1-212ENST00000596163 RCC1P18754 421 aaPredicted RBP13.95□□□□□ -0.18
SHKBP1-212ENST00000596163 PAX6P26367 422 aa13.95□□□□□ -0.18
SHKBP1-212ENST00000596163 MRPS15P82914 257 aaKnown RBP13.95□□□□□ -0.18
SHKBP1-212ENST00000596163 MADCAM1Q13477 382 aa13.95□□□□□ -0.18
SHKBP1-212ENST00000596163 TPTE2P1Q5T6R2 138 aa13.95□□□□□ -0.18
SHKBP1-212ENST00000596163 MOB1BQ7L9L4 216 aa13.95□□□□□ -0.18
SHKBP1-212ENST00000596163 C8orf31Q8N9H6 132 aa13.95□□□□□ -0.18
SHKBP1-212ENST00000596163 OR10X1Q8NGY0 326 aa13.95□□□□□ -0.18
SHKBP1-212ENST00000596163 PIFOQ8TCI5 191 aa13.95□□□□□ -0.18
SHKBP1-212ENST00000596163 RPEQ96AT9 228 aa13.95□□□□□ -0.18
SHKBP1-212ENST00000596163 ABRACLQ9P1F3 81 aa13.95□□□□□ -0.18
SHKBP1-212ENST00000596163 GNG12Q9UBI6 72 aa13.95□□□□□ -0.18
SHKBP1-212ENST00000596163 MGAT4AQ9UM21 535 aa13.95□□□□□ -0.18
SHKBP1-212ENST00000596163 TCF19Q9Y242 345 aa13.95□□□□□ -0.18
SHKBP1-212ENST00000596163 CLPSL1A2RUU4 121 aa13.94□□□□□ -0.18
SHKBP1-212ENST00000596163 LY6LH3BQJ8 138 aa13.94□□□□□ -0.18
SHKBP1-212ENST00000596163 IL3RAP26951 378 aa13.94□□□□□ -0.18
SHKBP1-212ENST00000596163 SDC2P34741 201 aa13.94□□□□□ -0.18
SHKBP1-212ENST00000596163 GNG10P50151 68 aa13.94□□□□□ -0.18
SHKBP1-212ENST00000596163 RAB13P51153 203 aa13.94□□□□□ -0.18
SHKBP1-212ENST00000596163 PRR18Q8N4B5 295 aa13.94□□□□□ -0.18
SHKBP1-212ENST00000596163 LINC00311Q8N616 119 aa13.94□□□□□ -0.18
SHKBP1-212ENST00000596163 LEAP2Q969E1 77 aa13.94□□□□□ -0.18
SHKBP1-212ENST00000596163 GALMQ96C23 342 aa13.94□□□□□ -0.18
SHKBP1-212ENST00000596163 ZNF747Q9BV97 191 aa13.94□□□□□ -0.18
SHKBP1-212ENST00000596163 STAB1Q9NY15 2570 aa13.94□□□□□ -0.18
SHKBP1-212ENST00000596163 KIAA2026Q5HYC2 2103 aa13.93□□□□□ -0.18
SHKBP1-212ENST00000596163 TRBV6-6A0A0A6YYG2 114 aa13.93□□□□□ -0.18
SHKBP1-212ENST00000596163 TRIM64CA6NLI5 447 aa13.93□□□□□ -0.18
SHKBP1-212ENST00000596163 FOXI3A8MTJ6 420 aaPredicted RBP13.93□□□□□ -0.18
SHKBP1-212ENST00000596163 HAX1O00165 279 aa13.93□□□□□ -0.18
SHKBP1-212ENST00000596163 AIREO43918 545 aa13.93□□□□□ -0.18
SHKBP1-212ENST00000596163 TMEM127O75204 238 aa13.93□□□□□ -0.18
SHKBP1-212ENST00000596163 TSPAN9O75954 239 aa13.93□□□□□ -0.18
SHKBP1-212ENST00000596163 RGS11O94810 467 aa13.93□□□□□ -0.18
SHKBP1-212ENST00000596163 NAPSAO96009 420 aa13.93□□□□□ -0.18
SHKBP1-212ENST00000596163 IGHV3-7P01780 117 aa13.93□□□□□ -0.18
SHKBP1-212ENST00000596163 MDKP21741 143 aaPredicted RBP13.93□□□□□ -0.18
SHKBP1-212ENST00000596163 RAB7AP51149 207 aa13.93□□□□□ -0.18
SHKBP1-212ENST00000596163 TMEM50BP56557 158 aa13.93□□□□□ -0.18
SHKBP1-212ENST00000596163 LOXL3P58215 753 aa13.93□□□□□ -0.18
SHKBP1-212ENST00000596163 HTD2P86397 168 aa13.93□□□□□ -0.18
SHKBP1-212ENST00000596163 RELBQ01201 579 aa13.93□□□□□ -0.18
SHKBP1-212ENST00000596163 ARL6IP1Q15041 203 aa13.93□□□□□ -0.18
SHKBP1-212ENST00000596163 OLFML2AQ68BL7 652 aa13.93□□□□□ -0.18
SHKBP1-212ENST00000596163 OR4C13Q8NGP0 309 aa13.93□□□□□ -0.18
SHKBP1-212ENST00000596163 OR1L1Q8NH94 360 aa13.93□□□□□ -0.18
SHKBP1-212ENST00000596163 UBALD1Q8TB05 177 aa13.93□□□□□ -0.18
SHKBP1-212ENST00000596163 SETD6Q8TBK2 473 aa13.93□□□□□ -0.18
SHKBP1-212ENST00000596163 TOMM40LQ969M1 308 aa13.93□□□□□ -0.18
SHKBP1-212ENST00000596163 RAB3CQ96E17 227 aa13.93□□□□□ -0.18
SHKBP1-212ENST00000596163 ARHGAP5-AS1Q96IT6 56 aa13.93□□□□□ -0.18
SHKBP1-212ENST00000596163 OCSTAMPQ9BR26 566 aa13.93□□□□□ -0.18
SHKBP1-212ENST00000596163 PECRQ9BY49 303 aa13.93□□□□□ -0.18
SHKBP1-212ENST00000596163 NPFFR1Q9GZQ6 430 aa13.93□□□□□ -0.18
SHKBP1-212ENST00000596163 C16orf95Q9H693 158 aa13.93□□□□□ -0.18
SHKBP1-212ENST00000596163 RANBP3Q9H6Z4 567 aaPredicted RBP13.93□□□□□ -0.18
SHKBP1-212ENST00000596163 OR2S2Q9NQN1 319 aa13.93□□□□□ -0.18
SHKBP1-212ENST00000596163 DAPK2Q9UIK4 370 aa13.93□□□□□ -0.18
SHKBP1-212ENST00000596163 IGHV3-43A0A0B4J1X8 118 aa13.92□□□□□ -0.18
SHKBP1-212ENST00000596163 A6NDX4 124 aa13.92□□□□□ -0.18
SHKBP1-212ENST00000596163 SCGNO76038 276 aa13.92□□□□□ -0.18
SHKBP1-212ENST00000596163 LPLP06858 475 aa13.92□□□□□ -0.18
SHKBP1-212ENST00000596163 IGHV3-43DP0DP04 118 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms