RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 NDNFQ8TB73 568 aa8.97□□□□□ -0.97
VRK3-210ENST00000596121 MMP28Q9H239 520 aa8.97□□□□□ -0.97
VRK3-210ENST00000596121 DPM3Q9P2X0 92 aa8.97□□□□□ -0.97
VRK3-210ENST00000596121 FBLN5Q9UBX5 448 aa8.97□□□□□ -0.97
VRK3-210ENST00000596121 STEAP1Q9UHE8 339 aa8.97□□□□□ -0.97
VRK3-210ENST00000596121 SIGLEC9Q9Y336 463 aa8.97□□□□□ -0.97
VRK3-210ENST00000596121 MMP24Q9Y5R2 645 aa8.97□□□□□ -0.97
VRK3-210ENST00000596121 TRIM64CA6NLI5 447 aa8.96□□□□□ -0.98
VRK3-210ENST00000596121 TOR1AO14656 332 aa8.96□□□□□ -0.98
VRK3-210ENST00000596121 PDCD5O14737 125 aa8.96□□□□□ -0.98
VRK3-210ENST00000596121 NAPSAO96009 420 aa8.96□□□□□ -0.98
VRK3-210ENST00000596121 HBZP02008 142 aa8.96□□□□□ -0.98
VRK3-210ENST00000596121 CRYBA1P05813 215 aa8.96□□□□□ -0.98
VRK3-210ENST00000596121 CD36P16671 472 aa8.96□□□□□ -0.98
VRK3-210ENST00000596121 RAB3BP20337 219 aa8.96□□□□□ -0.98
VRK3-210ENST00000596121 TGFBR1P36897 503 aa8.96□□□□□ -0.98
VRK3-210ENST00000596121 GNG10P50151 68 aa8.96□□□□□ -0.98
VRK3-210ENST00000596121 DYNLT3P51808 116 aa8.96□□□□□ -0.98
VRK3-210ENST00000596121 ZNF134P52741 427 aa8.96□□□□□ -0.98
VRK3-210ENST00000596121 MOGAT2Q3SYC2 334 aa8.96□□□□□ -0.98
VRK3-210ENST00000596121 TPTE2P1Q5T6R2 138 aa8.96□□□□□ -0.98
VRK3-210ENST00000596121 OLFML2AQ68BL7 652 aa8.96□□□□□ -0.98
VRK3-210ENST00000596121 Q6ZS46 218 aa8.96□□□□□ -0.98
VRK3-210ENST00000596121 TMEM219Q86XT9 240 aa8.96□□□□□ -0.98
VRK3-210ENST00000596121 C3orf56Q8N813 242 aa8.96□□□□□ -0.98
VRK3-210ENST00000596121 OR10A7Q8NGE5 316 aa8.96□□□□□ -0.98
VRK3-210ENST00000596121 OR9G1Q8NH87 305 aa8.96□□□□□ -0.98
VRK3-210ENST00000596121 ZNF596Q8TC21 504 aa8.96□□□□□ -0.98
VRK3-210ENST00000596121 RBMXL1Q96E39 390 aaKnown RBP8.96□□□□□ -0.98
VRK3-210ENST00000596121 NEDD4LQ96PU5 975 aa8.96□□□□□ -0.98
VRK3-210ENST00000596121 CHCHD6Q9BRQ6 235 aa8.96□□□□□ -0.98
VRK3-210ENST00000596121 HDHD3Q9BSH5 251 aaPredicted RBP8.96□□□□□ -0.98
VRK3-210ENST00000596121 CENPOQ9BU64 300 aa8.96□□□□□ -0.98
VRK3-210ENST00000596121 ZNF747Q9BV97 191 aa8.96□□□□□ -0.98
VRK3-210ENST00000596121 ZNF696Q9H7X3 374 aa8.96□□□□□ -0.98
VRK3-210ENST00000596121 TAF9BQ9HBM6 251 aa8.96□□□□□ -0.98
VRK3-210ENST00000596121 MBNL3Q9NUK0 354 aaKnown RBP8.96□□□□□ -0.98
VRK3-210ENST00000596121 GFOD1Q9NXC2 390 aa8.96□□□□□ -0.98
VRK3-210ENST00000596121 TRAPPC2LQ9UL33 140 aa8.96□□□□□ -0.98
VRK3-210ENST00000596121 TCF19Q9Y242 345 aa8.96□□□□□ -0.98
VRK3-210ENST00000596121 KCNK7Q9Y2U2 307 aa8.96□□□□□ -0.98
VRK3-210ENST00000596121 TRRAPQ9Y4A5 3859 aa8.95□□□□□ -0.98
VRK3-210ENST00000596121 BTBD17A6NE02 478 aa8.95□□□□□ -0.98
VRK3-210ENST00000596121 LEUTXA8MZ59 168 aa8.95□□□□□ -0.98
VRK3-210ENST00000596121 SDCBPO00560 298 aaPredicted RBP8.95□□□□□ -0.98
VRK3-210ENST00000596121 CA11O75493 328 aa8.95□□□□□ -0.98
VRK3-210ENST00000596121 TSPAN9O75954 239 aa8.95□□□□□ -0.98
VRK3-210ENST00000596121 TNFAIP8O95379 198 aa8.95□□□□□ -0.98
VRK3-210ENST00000596121 MYL9P24844 172 aa8.95□□□□□ -0.98
VRK3-210ENST00000596121 SDC2P34741 201 aa8.95□□□□□ -0.98
VRK3-210ENST00000596121 VEGFCP49767 419 aa8.95□□□□□ -0.98
VRK3-210ENST00000596121 PSMD7P51665 324 aa8.95□□□□□ -0.98
VRK3-210ENST00000596121 PRRX1P54821 245 aa8.95□□□□□ -0.98
VRK3-210ENST00000596121 RPL15P61313 204 aaKnown RBP8.95□□□□□ -0.98
VRK3-210ENST00000596121 GNMTQ14749 295 aa8.95□□□□□ -0.98
VRK3-210ENST00000596121 DHRS7BQ6IAN0 325 aaPredicted RBP8.95□□□□□ -0.98
VRK3-210ENST00000596121 ZNF880Q6PDB4 577 aa8.95□□□□□ -0.98
VRK3-210ENST00000596121 SLC16A12Q6ZSM3 486 aa8.95□□□□□ -0.98
VRK3-210ENST00000596121 ZNF439Q8NDP4 499 aa8.95□□□□□ -0.98
VRK3-210ENST00000596121 OR52L2PQ8NGH6 319 aa8.95□□□□□ -0.98
VRK3-210ENST00000596121 OR52M1Q8NGK5 317 aa8.95□□□□□ -0.98
VRK3-210ENST00000596121 OR4F5Q8NH21 305 aa8.95□□□□□ -0.98
VRK3-210ENST00000596121 YIPF6Q96EC8 236 aa8.95□□□□□ -0.98
VRK3-210ENST00000596121 ARHGAP5-AS1Q96IT6 56 aa8.95□□□□□ -0.98
VRK3-210ENST00000596121 PECRQ9BY49 303 aa8.95□□□□□ -0.98
VRK3-210ENST00000596121 C16orf95Q9H693 158 aa8.95□□□□□ -0.98
VRK3-210ENST00000596121 AK3Q9UIJ7 227 aa8.95□□□□□ -0.98
VRK3-210ENST00000596121 SSR3Q9UNL2 185 aa8.95□□□□□ -0.98
VRK3-210ENST00000596121 A0A087WXM4 84 aa8.94□□□□□ -0.98
VRK3-210ENST00000596121 LOC100506127A0A0U1RQW1 187 aa8.94□□□□□ -0.98
VRK3-210ENST00000596121 CLPSL1A2RUU4 121 aa8.94□□□□□ -0.98
VRK3-210ENST00000596121 SMIM18P0DKX4 95 aa8.94□□□□□ -0.98
VRK3-210ENST00000596121 PROK1P58294 105 aa8.94□□□□□ -0.98
VRK3-210ENST00000596121 CT45A1Q5HYN5 189 aa8.94□□□□□ -0.98
VRK3-210ENST00000596121 PRR18Q8N4B5 295 aa8.94□□□□□ -0.98
VRK3-210ENST00000596121 LINC00311Q8N616 119 aa8.94□□□□□ -0.98
VRK3-210ENST00000596121 OR10V1Q8NGI7 309 aa8.94□□□□□ -0.98
VRK3-210ENST00000596121 CT45A3Q8NHU0 189 aa8.94□□□□□ -0.98
VRK3-210ENST00000596121 CFHR4Q92496 578 aa8.94□□□□□ -0.98
VRK3-210ENST00000596121 URM1Q9BTM9 101 aaKnown RBP8.94□□□□□ -0.98
VRK3-210ENST00000596121 LIN7BQ9HAP6 207 aa8.94□□□□□ -0.98
VRK3-210ENST00000596121 PLEKHJ1Q9NW61 149 aa8.94□□□□□ -0.98
VRK3-210ENST00000596121 RAB22AQ9UL26 194 aa8.94□□□□□ -0.98
VRK3-210ENST00000596121 HSF4Q9ULV5 492 aa8.94□□□□□ -0.98
VRK3-210ENST00000596121 TRBV6-6A0A0A6YYG2 114 aa8.93□□□□□ -0.98
VRK3-210ENST00000596121 A0A1W2PPI3 338 aa8.93□□□□□ -0.98
VRK3-210ENST00000596121 FAM90A9PA6NNJ1 464 aa8.93□□□□□ -0.98
VRK3-210ENST00000596121 POM121CA8CG34 1229 aa8.93□□□□□ -0.98
VRK3-210ENST00000596121 NOTOA8MTQ0 251 aa8.93□□□□□ -0.98
VRK3-210ENST00000596121 H3BUI4 141 aa8.93□□□□□ -0.98
VRK3-210ENST00000596121 RAB27BO00194 218 aa8.93□□□□□ -0.98
VRK3-210ENST00000596121 SPINT2O43291 252 aa8.93□□□□□ -0.98
VRK3-210ENST00000596121 BLCAPP62952 87 aa8.93□□□□□ -0.98
VRK3-210ENST00000596121 MXD1Q05195 221 aa8.93□□□□□ -0.98
VRK3-210ENST00000596121 HABP2Q14520 560 aaPredicted RBP8.93□□□□□ -0.98
VRK3-210ENST00000596121 HMGN3Q15651 99 aa8.93□□□□□ -0.98
VRK3-210ENST00000596121 C6orf183Q5T699 404 aa8.93□□□□□ -0.98
VRK3-210ENST00000596121 HIST2H2BDQ6DRA6 164 aa8.93□□□□□ -0.98
VRK3-210ENST00000596121 Q6ZTK2 550 aa8.93□□□□□ -0.98
VRK3-210ENST00000596121 TPRA1Q86W33 373 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms