RNA–Protein interactions for RNA: ENST00000592690.1

LIG3-215, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-215ENST00000592690 OR10A3P58181 314 aa12.61□□□□□ -0.39
LIG3-215ENST00000592690 DIAPH2-AS1Q14236 149 aa12.61□□□□□ -0.39
LIG3-215ENST00000592690 OR2W3Q7Z3T1 314 aa12.61□□□□□ -0.39
LIG3-215ENST00000592690 C6orf201Q7Z4U5 140 aa12.61□□□□□ -0.39
LIG3-215ENST00000592690 C5orf24Q7Z6I8 188 aa12.61□□□□□ -0.39
LIG3-215ENST00000592690 OR51D1Q8NGF3 324 aa12.61□□□□□ -0.39
LIG3-215ENST00000592690 OR52M1Q8NGK5 317 aa12.61□□□□□ -0.39
LIG3-215ENST00000592690 OR1L1Q8NH94 360 aa12.61□□□□□ -0.39
LIG3-215ENST00000592690 SGMS2Q8NHU3 365 aa12.61□□□□□ -0.39
LIG3-215ENST00000592690 FCGR1BQ92637 280 aa12.61□□□□□ -0.39
LIG3-215ENST00000592690 CREB3L1Q96BA8 519 aa12.61□□□□□ -0.39
LIG3-215ENST00000592690 NEDD4LQ96PU5 975 aa12.61□□□□□ -0.39
LIG3-215ENST00000592690 CITED1Q99966 193 aa12.61□□□□□ -0.39
LIG3-215ENST00000592690 NPFFR1Q9GZQ6 430 aa12.61□□□□□ -0.39
LIG3-215ENST00000592690 LPAR5Q9H1C0 372 aa12.61□□□□□ -0.39
LIG3-215ENST00000592690 GFOD1Q9NXC2 390 aa12.61□□□□□ -0.39
LIG3-215ENST00000592690 FBLN5Q9UBX5 448 aa12.61□□□□□ -0.39
LIG3-215ENST00000592690 PITPNC1Q9UKF7 332 aa12.61□□□□□ -0.39
LIG3-215ENST00000592690 AMMECR1Q9Y4X0 333 aaPredicted RBP12.61□□□□□ -0.39
LIG3-215ENST00000592690 V9GY05 133 aa12.61□□□□□ -0.39
LIG3-215ENST00000592690 TRAV1-2A0A0B4J238 106 aa12.6□□□□□ -0.39
LIG3-215ENST00000592690 KIR2DS4P43632 304 aa12.6□□□□□ -0.39
LIG3-215ENST00000592690 C6orf183Q5T699 404 aa12.6□□□□□ -0.39
LIG3-215ENST00000592690 HES5Q5TA89 166 aa12.6□□□□□ -0.39
LIG3-215ENST00000592690 C22orf42Q6IC83 251 aa12.6□□□□□ -0.39
LIG3-215ENST00000592690 SLC16A12Q6ZSM3 486 aa12.6□□□□□ -0.39
LIG3-215ENST00000592690 PRR18Q8N4B5 295 aa12.6□□□□□ -0.39
LIG3-215ENST00000592690 TOMM40LQ969M1 308 aa12.6□□□□□ -0.39
LIG3-215ENST00000592690 RPEQ96AT9 228 aa12.6□□□□□ -0.39
LIG3-215ENST00000592690 FAM3DQ96BQ1 224 aa12.6□□□□□ -0.39
LIG3-215ENST00000592690 FAAP24Q9BTP7 215 aa12.6□□□□□ -0.39
LIG3-215ENST00000592690 ZNF702PQ9H963 129 aa12.6□□□□□ -0.39
LIG3-215ENST00000592690 A0A1W2PPI3 338 aa12.59□□□□□ -0.39
LIG3-215ENST00000592690 OOSP1A8MZH6 123 aa12.59□□□□□ -0.39
LIG3-215ENST00000592690 H3BUI4 141 aa12.59□□□□□ -0.39
LIG3-215ENST00000592690 SOCS1O15524 211 aa12.59□□□□□ -0.39
LIG3-215ENST00000592690 HBZP02008 142 aa12.59□□□□□ -0.39
LIG3-215ENST00000592690 MYL9P24844 172 aa12.59□□□□□ -0.39
LIG3-215ENST00000592690 BLVRBP30043 206 aaPredicted RBP12.59□□□□□ -0.39
LIG3-215ENST00000592690 BRS3P32247 399 aa12.59□□□□□ -0.39
LIG3-215ENST00000592690 EFNB2P52799 333 aa12.59□□□□□ -0.39
LIG3-215ENST00000592690 PLA2G7Q13093 441 aa12.59□□□□□ -0.39
LIG3-215ENST00000592690 MADCAM1Q13477 382 aa12.59□□□□□ -0.39
LIG3-215ENST00000592690 HABP2Q14520 560 aaPredicted RBP12.59□□□□□ -0.39
LIG3-215ENST00000592690 KCTD21Q4G0X4 260 aa12.59□□□□□ -0.39
LIG3-215ENST00000592690 Q6ZPA2 131 aa12.59□□□□□ -0.39
LIG3-215ENST00000592690 TAF9BQ9HBM6 251 aa12.59□□□□□ -0.39
LIG3-215ENST00000592690 MBNL3Q9NUK0 354 aaKnown RBP12.59□□□□□ -0.39
LIG3-215ENST00000592690 TMEM272A0A1B0GTI8 110 aa12.58□□□□□ -0.4
LIG3-215ENST00000592690 SMIM30A4D0T7 59 aa12.58□□□□□ -0.4
LIG3-215ENST00000592690 FOXI3A8MTJ6 420 aaPredicted RBP12.58□□□□□ -0.4
LIG3-215ENST00000592690 LDLRAD4O15165 306 aa12.58□□□□□ -0.4
LIG3-215ENST00000592690 SLC31A2O15432 143 aa12.58□□□□□ -0.4
LIG3-215ENST00000592690 SPINT2O43291 252 aa12.58□□□□□ -0.4
LIG3-215ENST00000592690 GALP22466 123 aa12.58□□□□□ -0.4
LIG3-215ENST00000592690 MNDAP41218 407 aa12.58□□□□□ -0.4
LIG3-215ENST00000592690 ARHGDIBP52566 201 aa12.58□□□□□ -0.4
LIG3-215ENST00000592690 NEDD8Q15843 81 aa12.58□□□□□ -0.4
LIG3-215ENST00000592690 C2orf76Q3KRA6 126 aa12.58□□□□□ -0.4
LIG3-215ENST00000592690 CCDC144NLQ6NUI1 221 aa12.58□□□□□ -0.4
LIG3-215ENST00000592690 TRAT1Q6PIZ9 186 aa12.58□□□□□ -0.4
LIG3-215ENST00000592690 Q6ZS46 218 aa12.58□□□□□ -0.4
LIG3-215ENST00000592690 NR2C2APQ86WQ0 139 aa12.58□□□□□ -0.4
LIG3-215ENST00000592690 FAM89BQ8N5H3 189 aa12.58□□□□□ -0.4
LIG3-215ENST00000592690 ZNF439Q8NDP4 499 aa12.58□□□□□ -0.4
LIG3-215ENST00000592690 OR10V1Q8NGI7 309 aa12.58□□□□□ -0.4
LIG3-215ENST00000592690 OR10X1Q8NGY0 326 aa12.58□□□□□ -0.4
LIG3-215ENST00000592690 OR56B4Q8NH76 319 aa12.58□□□□□ -0.4
LIG3-215ENST00000592690 OR2T6Q8NHC8 308 aa12.58□□□□□ -0.4
LIG3-215ENST00000592690 URM1Q9BTM9 101 aaKnown RBP12.58□□□□□ -0.4
LIG3-215ENST00000592690 TXNL4BQ9NX01 149 aaKnown RBP12.58□□□□□ -0.4
LIG3-215ENST00000592690 STEAP1Q9UHE8 339 aa12.58□□□□□ -0.4
LIG3-215ENST00000592690 STUB1Q9UNE7 303 aa12.58□□□□□ -0.4
LIG3-215ENST00000592690 NBEAL1Q6ZS30 2694 aa12.58□□□□□ -0.4
LIG3-215ENST00000592690 PKD1L1Q8TDX9 2849 aa12.57□□□□□ -0.4
LIG3-215ENST00000592690 PDCD5O14737 125 aa12.57□□□□□ -0.4
LIG3-215ENST00000592690 TIMM23O14925 209 aa12.57□□□□□ -0.4
LIG3-215ENST00000592690 RAB3BP20337 219 aa12.57□□□□□ -0.4
LIG3-215ENST00000592690 VEGFCP49767 419 aa12.57□□□□□ -0.4
LIG3-215ENST00000592690 PSMD7P51665 324 aa12.57□□□□□ -0.4
LIG3-215ENST00000592690 BLCAPP62952 87 aa12.57□□□□□ -0.4
LIG3-215ENST00000592690 GNMTQ14749 295 aa12.57□□□□□ -0.4
LIG3-215ENST00000592690 PRR31Q5SQ13 230 aa12.57□□□□□ -0.4
LIG3-215ENST00000592690 Q8N2B8 174 aa12.57□□□□□ -0.4
LIG3-215ENST00000592690 LINC00311Q8N616 119 aa12.57□□□□□ -0.4
LIG3-215ENST00000592690 DRAM1Q8N682 238 aa12.57□□□□□ -0.4
LIG3-215ENST00000592690 CFHR4Q92496 578 aa12.57□□□□□ -0.4
LIG3-215ENST00000592690 SLC25A33Q9BSK2 321 aa12.57□□□□□ -0.4
LIG3-215ENST00000592690 ZNF696Q9H7X3 374 aa12.57□□□□□ -0.4
LIG3-215ENST00000592690 RAB9BQ9NP90 201 aa12.57□□□□□ -0.4
LIG3-215ENST00000592690 SERTAD4Q9NUC0 356 aa12.57□□□□□ -0.4
LIG3-215ENST00000592690 PLEKHJ1Q9NW61 149 aa12.57□□□□□ -0.4
LIG3-215ENST00000592690 GNG12Q9UBI6 72 aa12.57□□□□□ -0.4
LIG3-215ENST00000592690 A0A0B4J203 849 aa12.56□□□□□ -0.4
LIG3-215ENST00000592690 IFITM5A6NNB3 132 aa12.56□□□□□ -0.4
LIG3-215ENST00000592690 HSD17B6O14756 317 aa12.56□□□□□ -0.4
LIG3-215ENST00000592690 NAPSAO96009 420 aa12.56□□□□□ -0.4
LIG3-215ENST00000592690 FGF9P31371 208 aaPredicted RBP12.56□□□□□ -0.4
LIG3-215ENST00000592690 REG1BP48304 166 aa12.56□□□□□ -0.4
LIG3-215ENST00000592690 ZNF134P52741 427 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms