RNA–Protein interactions for RNA: ENST00000588300.1

ERCC1-206, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 1,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-206ENST00000588300 MT-ND4P03905 459 aa12.51□□□□□ -0.41
ERCC1-206ENST00000588300 FOXE3Q13461 319 aa12.51□□□□□ -0.41
ERCC1-206ENST00000588300 GPR176Q14439 515 aa12.51□□□□□ -0.41
ERCC1-206ENST00000588300 SMN1Q16637 294 aaKnown RBP12.51□□□□□ -0.41
ERCC1-206ENST00000588300 SLC22A6Q4U2R8 563 aa12.51□□□□□ -0.41
ERCC1-206ENST00000588300 OR2G6Q5TZ20 316 aa12.51□□□□□ -0.41
ERCC1-206ENST00000588300 TMEM104Q8NE00 496 aa12.51□□□□□ -0.41
ERCC1-206ENST00000588300 OR8H1Q8NGG4 311 aa12.51□□□□□ -0.41
ERCC1-206ENST00000588300 ST6GALNAC6Q969X2 333 aa12.51□□□□□ -0.41
ERCC1-206ENST00000588300 ORAI1Q96D31 301 aa12.51□□□□□ -0.41
ERCC1-206ENST00000588300 S1PR3Q99500 378 aa12.51□□□□□ -0.41
ERCC1-206ENST00000588300 ZNF184Q99676 751 aaPredicted RBP12.51□□□□□ -0.41
ERCC1-206ENST00000588300 RASL11BQ9BPW5 248 aa12.51□□□□□ -0.41
ERCC1-206ENST00000588300 SPACA1Q9HBV2 294 aa12.51□□□□□ -0.41
ERCC1-206ENST00000588300 A0A1W2PP11 408 aa12.5□□□□□ -0.41
ERCC1-206ENST00000588300 IRGMA1A4Y4 181 aa12.5□□□□□ -0.41
ERCC1-206ENST00000588300 OGG1O15527 345 aa12.5□□□□□ -0.41
ERCC1-206ENST00000588300 SPINT2O43291 252 aa12.5□□□□□ -0.41
ERCC1-206ENST00000588300 WBP4O75554 376 aaKnown RBP12.5□□□□□ -0.41
ERCC1-206ENST00000588300 ELANEP08246 267 aa12.5□□□□□ -0.41
ERCC1-206ENST00000588300 IGFBP3P17936 291 aaPredicted RBP12.5□□□□□ -0.41
ERCC1-206ENST00000588300 TMEM30BQ3MIR4 351 aa12.5□□□□□ -0.41
ERCC1-206ENST00000588300 FAM53AQ6NSI3 398 aaPredicted RBP12.5□□□□□ -0.41
ERCC1-206ENST00000588300 RNF152Q8N8N0 203 aa12.5□□□□□ -0.41
ERCC1-206ENST00000588300 ZNF555Q8NEP9 628 aa12.5□□□□□ -0.41
ERCC1-206ENST00000588300 OR5M8Q8NGP6 311 aa12.5□□□□□ -0.41
ERCC1-206ENST00000588300 OR13C5Q8NGS8 318 aa12.5□□□□□ -0.41
ERCC1-206ENST00000588300 TFAP2CQ92754 450 aa12.5□□□□□ -0.41
ERCC1-206ENST00000588300 PLSCR3Q9NRY6 295 aa12.5□□□□□ -0.41
ERCC1-206ENST00000588300 BABAM2Q9NXR7 383 aa12.5□□□□□ -0.41
ERCC1-206ENST00000588300 GNG12Q9UBI6 72 aa12.5□□□□□ -0.41
ERCC1-206ENST00000588300 CKLFQ9UBR5 152 aa12.5□□□□□ -0.41
ERCC1-206ENST00000588300 TRAPPC2LQ9UL33 140 aa12.5□□□□□ -0.41
ERCC1-206ENST00000588300 SIRT4Q9Y6E7 314 aaPredicted RBP12.5□□□□□ -0.41
ERCC1-206ENST00000588300 TENM3Q9P273 2699 aa12.5□□□□□ -0.41
ERCC1-206ENST00000588300 TRBV5-5A0A0J9YX44 114 aa12.49□□□□□ -0.41
ERCC1-206ENST00000588300 C12orf77C9JDV5 145 aa12.49□□□□□ -0.41
ERCC1-206ENST00000588300 MCRIP1C9JLW8 97 aa12.49□□□□□ -0.41
ERCC1-206ENST00000588300 SLC31A2O15432 143 aa12.49□□□□□ -0.41
ERCC1-206ENST00000588300 MYL12AP19105 171 aa12.49□□□□□ -0.41
ERCC1-206ENST00000588300 VDAC1P21796 283 aa12.49□□□□□ -0.41
ERCC1-206ENST00000588300 CDX1P47902 265 aaPredicted RBP12.49□□□□□ -0.41
ERCC1-206ENST00000588300 ZNF137PP52743 207 aa12.49□□□□□ -0.41
ERCC1-206ENST00000588300 KIR2DS1Q14954 304 aa12.49□□□□□ -0.41
ERCC1-206ENST00000588300 DEFB136Q30KP8 78 aa12.49□□□□□ -0.41
ERCC1-206ENST00000588300 Q499Y3 187 aa12.49□□□□□ -0.41
ERCC1-206ENST00000588300 C6orf183Q5T699 404 aa12.49□□□□□ -0.41
ERCC1-206ENST00000588300 SYT6Q5T7P8 510 aaPredicted RBP12.49□□□□□ -0.41
ERCC1-206ENST00000588300 LCNL1Q6ZST4 164 aa12.49□□□□□ -0.41
ERCC1-206ENST00000588300 SLC25A48Q6ZT89 311 aaKnown RBP12.49□□□□□ -0.41
ERCC1-206ENST00000588300 PQLC1Q8N2U9 271 aa12.49□□□□□ -0.41
ERCC1-206ENST00000588300 ZNF439Q8NDP4 499 aa12.49□□□□□ -0.41
ERCC1-206ENST00000588300 S100A14Q9HCY8 104 aa12.49□□□□□ -0.41
ERCC1-206ENST00000588300 ETAA1Q9NY74 926 aa12.49□□□□□ -0.41
ERCC1-206ENST00000588300 RCC2Q9P258 522 aaKnown RBP12.49□□□□□ -0.41
ERCC1-206ENST00000588300 EXOSC1Q9Y3B2 195 aaKnown RBP12.49□□□□□ -0.41
ERCC1-206ENST00000588300 ZNF736B4DX44 427 aaPredicted RBP12.48□□□□□ -0.41
ERCC1-206ENST00000588300 GPX5O75715 221 aa12.48□□□□□ -0.41
ERCC1-206ENST00000588300 SOX6P35712 828 aa12.48□□□□□ -0.41
ERCC1-206ENST00000588300 LUMP51884 338 aaPredicted RBP12.48□□□□□ -0.41
ERCC1-206ENST00000588300 MED21Q13503 144 aa12.48□□□□□ -0.41
ERCC1-206ENST00000588300 YIF1BQ5BJH7 314 aa12.48□□□□□ -0.41
ERCC1-206ENST00000588300 C9orf66Q5T8R8 295 aa12.48□□□□□ -0.41
ERCC1-206ENST00000588300 TRAT1Q6PIZ9 186 aa12.48□□□□□ -0.41
ERCC1-206ENST00000588300 FAM71E2Q8N5Q1 922 aa12.48□□□□□ -0.41
ERCC1-206ENST00000588300 OR4K15Q8NH41 348 aa12.48□□□□□ -0.41
ERCC1-206ENST00000588300 GHSRQ92847 366 aa12.48□□□□□ -0.41
ERCC1-206ENST00000588300 MRPS24Q96EL2 167 aaKnown RBP12.48□□□□□ -0.41
ERCC1-206ENST00000588300 RDH12Q96NR8 316 aa12.48□□□□□ -0.41
ERCC1-206ENST00000588300 HSPB9Q9BQS6 159 aa12.48□□□□□ -0.41
ERCC1-206ENST00000588300 SMPD3Q9NY59 655 aaPredicted RBP12.48□□□□□ -0.41
ERCC1-206ENST00000588300 DIMT1Q9UNQ2 313 aaKnown RBP12.48□□□□□ -0.41
ERCC1-206ENST00000588300 MRPS28Q9Y2Q9 187 aaKnown RBP12.48□□□□□ -0.41
ERCC1-206ENST00000588300 MAGEA13PA6NCF6 341 aa12.47□□□□□ -0.41
ERCC1-206ENST00000588300 LALBAP00709 142 aa12.47□□□□□ -0.41
ERCC1-206ENST00000588300 IGHG4P01861 327 aa12.47□□□□□ -0.41
ERCC1-206ENST00000588300 NHLRC4P0CG21 123 aaPredicted RBP12.47□□□□□ -0.41
ERCC1-206ENST00000588300 VSIG8P0DPA2 414 aa12.47□□□□□ -0.41
ERCC1-206ENST00000588300 FSTP19883 344 aa12.47□□□□□ -0.41
ERCC1-206ENST00000588300 ZNF134P52741 427 aa12.47□□□□□ -0.41
ERCC1-206ENST00000588300 F2RL1P55085 397 aa12.47□□□□□ -0.41
ERCC1-206ENST00000588300 CFHR3Q02985 330 aa12.47□□□□□ -0.41
ERCC1-206ENST00000588300 CT45A1Q5HYN5 189 aa12.47□□□□□ -0.41
ERCC1-206ENST00000588300 DMKNQ6E0U4 476 aaPredicted RBP12.47□□□□□ -0.41
ERCC1-206ENST00000588300 RAB12Q6IQ22 244 aa12.47□□□□□ -0.41
ERCC1-206ENST00000588300 GLIPR1L1Q6UWM5 242 aa12.47□□□□□ -0.41
ERCC1-206ENST00000588300 PRR18Q8N4B5 295 aa12.47□□□□□ -0.41
ERCC1-206ENST00000588300 JAGN1Q8N5M9 183 aa12.47□□□□□ -0.41
ERCC1-206ENST00000588300 OR10V1Q8NGI7 309 aa12.47□□□□□ -0.41
ERCC1-206ENST00000588300 CT45A3Q8NHU0 189 aa12.47□□□□□ -0.41
ERCC1-206ENST00000588300 C4orf3Q8WVX3 66 aa12.47□□□□□ -0.41
ERCC1-206ENST00000588300 MUL1Q969V5 352 aa12.47□□□□□ -0.41
ERCC1-206ENST00000588300 CHCHD3Q9NX63 227 aaKnown RBP12.47□□□□□ -0.41
ERCC1-206ENST00000588300 ZNF580Q9UK33 172 aa12.47□□□□□ -0.41
ERCC1-206ENST00000588300 TRAV8-7A0A075B6U6 113 aa12.46□□□□□ -0.41
ERCC1-206ENST00000588300 CA11O75493 328 aa12.46□□□□□ -0.41
ERCC1-206ENST00000588300 HBZP02008 142 aa12.46□□□□□ -0.41
ERCC1-206ENST00000588300 IGF1P05019 195 aa12.46□□□□□ -0.41
ERCC1-206ENST00000588300 OR5H8P0DN80 308 aa12.46□□□□□ -0.41
ERCC1-206ENST00000588300 STEAP3Q658P3 488 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms