RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 OR51D1Q8NGF3 324 aa9.14□□□□□ -0.95
LIG3-207ENST00000586119 OR51T1Q8NGJ9 327 aa9.14□□□□□ -0.95
LIG3-207ENST00000586119 OR5D14Q8NGL3 314 aa9.14□□□□□ -0.95
LIG3-207ENST00000586119 OR10K1Q8NGX5 313 aa9.14□□□□□ -0.95
LIG3-207ENST00000586119 UBALD1Q8TB05 177 aa9.14□□□□□ -0.95
LIG3-207ENST00000586119 MRGPRDQ8TDS7 321 aa9.14□□□□□ -0.95
LIG3-207ENST00000586119 RGP1Q92546 391 aaPredicted RBP9.14□□□□□ -0.95
LIG3-207ENST00000586119 DPF1Q92782 380 aa9.14□□□□□ -0.95
LIG3-207ENST00000586119 ZCCHC4Q9H5U6 513 aa9.14□□□□□ -0.95
LIG3-207ENST00000586119 LSM4Q9Y4Z0 139 aaKnown RBP9.14□□□□□ -0.95
LIG3-207ENST00000586119 DYNC2H1Q8NCM8 4307 aaKnown RBP9.14□□□□□ -0.95
LIG3-207ENST00000586119 OOSP1A8MZH6 123 aa9.13□□□□□ -0.95
LIG3-207ENST00000586119 CCL24O00175 119 aa9.13□□□□□ -0.95
LIG3-207ENST00000586119 CCRL2O00421 344 aa9.13□□□□□ -0.95
LIG3-207ENST00000586119 GPX5O75715 221 aa9.13□□□□□ -0.95
LIG3-207ENST00000586119 IGHG2P01859 326 aa9.13□□□□□ -0.95
LIG3-207ENST00000586119 OCMP0CE72 109 aaPredicted RBP9.13□□□□□ -0.95
LIG3-207ENST00000586119 PSMB9P28065 219 aa9.13□□□□□ -0.95
LIG3-207ENST00000586119 SSTR5P35346 364 aa9.13□□□□□ -0.95
LIG3-207ENST00000586119 KISS1Q15726 138 aa9.13□□□□□ -0.95
LIG3-207ENST00000586119 PAN3Q58A45 887 aaKnown RBP9.13□□□□□ -0.95
LIG3-207ENST00000586119 RSBN1Q5VWQ0 802 aaPredicted RBP9.13□□□□□ -0.95
LIG3-207ENST00000586119 LIPKQ5VXJ0 399 aa9.13□□□□□ -0.95
LIG3-207ENST00000586119 UNQ9370/PRO34162Q6UXP9 181 aa9.13□□□□□ -0.95
LIG3-207ENST00000586119 SLC35E3Q7Z769 313 aa9.13□□□□□ -0.95
LIG3-207ENST00000586119 ZNF695Q8IW36 515 aa9.13□□□□□ -0.95
LIG3-207ENST00000586119 STPG2Q8N412 459 aa9.13□□□□□ -0.95
LIG3-207ENST00000586119 CHPT1Q8WUD6 406 aa9.13□□□□□ -0.95
LIG3-207ENST00000586119 MUL1Q969V5 352 aa9.13□□□□□ -0.95
LIG3-207ENST00000586119 CREB3L1Q96BA8 519 aa9.13□□□□□ -0.95
LIG3-207ENST00000586119 MRPS26Q9BYN8 205 aaKnown RBP9.13□□□□□ -0.95
LIG3-207ENST00000586119 ZFP57Q9NU63 452 aa9.13□□□□□ -0.95
LIG3-207ENST00000586119 NDUFB11Q9NX14 153 aa9.13□□□□□ -0.95
LIG3-207ENST00000586119 OR6C3Q9NZP0 311 aa9.13□□□□□ -0.95
LIG3-207ENST00000586119 U3KQK5 164 aa9.13□□□□□ -0.95
LIG3-207ENST00000586119 TRBV5-7A0A0A0MS05 114 aa9.12□□□□□ -0.95
LIG3-207ENST00000586119 PNMA8CA0A1B0GUJ8 204 aa9.12□□□□□ -0.95
LIG3-207ENST00000586119 ZNF736B4DX44 427 aaPredicted RBP9.12□□□□□ -0.95
LIG3-207ENST00000586119 NPIPB11E5RHQ5 1161 aa9.12□□□□□ -0.95
LIG3-207ENST00000586119 SC5DO75845 299 aa9.12□□□□□ -0.95
LIG3-207ENST00000586119 HCKP08631 526 aa9.12□□□□□ -0.95
LIG3-207ENST00000586119 FSTP19883 344 aa9.12□□□□□ -0.95
LIG3-207ENST00000586119 SOX2P48431 317 aa9.12□□□□□ -0.95
LIG3-207ENST00000586119 NEDD8Q15843 81 aa9.12□□□□□ -0.95
LIG3-207ENST00000586119 PIGYQ3MUY2 71 aa9.12□□□□□ -0.95
LIG3-207ENST00000586119 ACSM3Q53FZ2 586 aa9.12□□□□□ -0.95
LIG3-207ENST00000586119 ZNF529Q6P280 563 aa9.12□□□□□ -0.95
LIG3-207ENST00000586119 MOB3BQ86TA1 216 aa9.12□□□□□ -0.95
LIG3-207ENST00000586119 SAXO1Q8IYX7 474 aa9.12□□□□□ -0.95
LIG3-207ENST00000586119 ZNF565Q8N9K5 539 aa9.12□□□□□ -0.95
LIG3-207ENST00000586119 CHST4Q8NCG5 386 aa9.12□□□□□ -0.95
LIG3-207ENST00000586119 OR51A2Q8NGJ7 313 aa9.12□□□□□ -0.95
LIG3-207ENST00000586119 TMEM106AQ96A25 262 aa9.12□□□□□ -0.95
LIG3-207ENST00000586119 CPNE2Q96FN4 548 aaPredicted RBP9.12□□□□□ -0.95
LIG3-207ENST00000586119 CYYR1Q96J86 154 aa9.12□□□□□ -0.95
LIG3-207ENST00000586119 EAF1Q96JC9 268 aaPredicted RBP9.12□□□□□ -0.95
LIG3-207ENST00000586119 MCRIP2Q9BUT9 160 aaKnown RBP9.12□□□□□ -0.95
LIG3-207ENST00000586119 TMED9Q9BVK6 235 aa9.12□□□□□ -0.95
LIG3-207ENST00000586119 CKLFQ9UBR5 152 aa9.12□□□□□ -0.95
LIG3-207ENST00000586119 SCOCQ9UIL1 159 aa9.12□□□□□ -0.95
LIG3-207ENST00000586119 SORL1Q92673 2214 aa9.12□□□□□ -0.95
LIG3-207ENST00000586119 RYR2Q92736 4967 aa9.12□□□□□ -0.95
LIG3-207ENST00000586119 A6NHS1 94 aa9.11□□□□□ -0.95
LIG3-207ENST00000586119 NCBP2LA6PVI3 153 aaKnown RBP9.11□□□□□ -0.95
LIG3-207ENST00000586119 FGF16O43320 207 aa9.11□□□□□ -0.95
LIG3-207ENST00000586119 SULT1B1O43704 296 aa9.11□□□□□ -0.95
LIG3-207ENST00000586119 ARL6IP5O75915 188 aa9.11□□□□□ -0.95
LIG3-207ENST00000586119 IL1AP01583 271 aa9.11□□□□□ -0.95
LIG3-207ENST00000586119 SMIM18P0DKX4 95 aa9.11□□□□□ -0.95
LIG3-207ENST00000586119 RAB3AP20336 220 aa9.11□□□□□ -0.95
LIG3-207ENST00000586119 ECI1P42126 302 aa9.11□□□□□ -0.95
LIG3-207ENST00000586119 GP2P55259 537 aaKnown RBP9.11□□□□□ -0.95
LIG3-207ENST00000586119 RPS25P62851 125 aaKnown RBP9.11□□□□□ -0.95
LIG3-207ENST00000586119 PPP3R1P63098 170 aa9.11□□□□□ -0.95
LIG3-207ENST00000586119 MADCAM1Q13477 382 aa9.11□□□□□ -0.95
LIG3-207ENST00000586119 SSX1Q16384 188 aa9.11□□□□□ -0.95
LIG3-207ENST00000586119 CD200R1LQ6Q8B3 271 aa9.11□□□□□ -0.95
LIG3-207ENST00000586119 SATL1Q86VE3 508 aa9.11□□□□□ -0.95
LIG3-207ENST00000586119 CDH26Q8IXH8 852 aa9.11□□□□□ -0.95
LIG3-207ENST00000586119 Q8N9W7 124 aa9.11□□□□□ -0.95
LIG3-207ENST00000586119 DERL3Q96Q80 235 aa9.11□□□□□ -0.95
LIG3-207ENST00000586119 OR14A2Q96R54 314 aa9.11□□□□□ -0.95
LIG3-207ENST00000586119 GPR61Q9BZJ8 451 aa9.11□□□□□ -0.95
LIG3-207ENST00000586119 LINC00574Q9H8X3 128 aa9.11□□□□□ -0.95
LIG3-207ENST00000586119 PLSCR3Q9NRY6 295 aa9.11□□□□□ -0.95
LIG3-207ENST00000586119 GAR1Q9NY12 217 aaKnown RBP9.11□□□□□ -0.95
LIG3-207ENST00000586119 AMMECR1Q9Y4X0 333 aaPredicted RBP9.11□□□□□ -0.95
LIG3-207ENST00000586119 SACSQ9NZJ4 4579 aa9.1□□□□□ -0.95
LIG3-207ENST00000586119 IGHV3-43A0A0B4J1X8 118 aa9.1□□□□□ -0.95
LIG3-207ENST00000586119 IGHV1-3A0A0C4DH29 117 aa9.1□□□□□ -0.95
LIG3-207ENST00000586119 TRDV1A0A1B0GX56 115 aa9.1□□□□□ -0.95
LIG3-207ENST00000586119 GABRPO00591 440 aa9.1□□□□□ -0.95
LIG3-207ENST00000586119 HSD17B6O14756 317 aa9.1□□□□□ -0.95
LIG3-207ENST00000586119 SLC31A2O15432 143 aa9.1□□□□□ -0.95
LIG3-207ENST00000586119 MAGEB3O15480 346 aa9.1□□□□□ -0.95
LIG3-207ENST00000586119 CDRT1O95170 752 aa9.1□□□□□ -0.95
LIG3-207ENST00000586119 UCHL1P09936 223 aa9.1□□□□□ -0.95
LIG3-207ENST00000586119 IGHV3-43DP0DP04 118 aa9.1□□□□□ -0.95
LIG3-207ENST00000586119 IGFBP3P17936 291 aaPredicted RBP9.1□□□□□ -0.95
LIG3-207ENST00000586119 GPR12P47775 334 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms