RNA–Protein interactions for RNA: ENST00000581021.5

SS18-218, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-218ENST00000581021 FAAP24Q9BTP7 215 aa16.17■□□□□ 0.18
SS18-218ENST00000581021 C16orf95Q9H693 158 aa16.17■□□□□ 0.18
SS18-218ENST00000581021 IGHV3-43A0A0B4J1X8 118 aa16.16■□□□□ 0.18
SS18-218ENST00000581021 A0A0B4J203 849 aa16.16■□□□□ 0.18
SS18-218ENST00000581021 SMIM30A4D0T7 59 aa16.16■□□□□ 0.18
SS18-218ENST00000581021 LEUTXA8MZ59 168 aa16.16■□□□□ 0.18
SS18-218ENST00000581021 F2RL2O00254 374 aa16.16■□□□□ 0.18
SS18-218ENST00000581021 SOCS1O15524 211 aa16.16■□□□□ 0.18
SS18-218ENST00000581021 ORC5O43913 435 aa16.16■□□□□ 0.18
SS18-218ENST00000581021 IGHV3-43DP0DP04 118 aa16.16■□□□□ 0.18
SS18-218ENST00000581021 GZMHP20718 246 aa16.16■□□□□ 0.18
SS18-218ENST00000581021 GALP22466 123 aa16.16■□□□□ 0.18
SS18-218ENST00000581021 NEDD8Q15843 81 aa16.16■□□□□ 0.18
SS18-218ENST00000581021 FAM89BQ8N5H3 189 aa16.16■□□□□ 0.18
SS18-218ENST00000581021 MBNL3Q9NUK0 354 aaKnown RBP16.16■□□□□ 0.18
SS18-218ENST00000581021 TXNL4BQ9NX01 149 aaKnown RBP16.16■□□□□ 0.18
SS18-218ENST00000581021 TRAPPC2LQ9UL33 140 aa16.16■□□□□ 0.18
SS18-218ENST00000581021 RNF114Q9Y508 228 aa16.16■□□□□ 0.18
SS18-218ENST00000581021 NBEAL1Q6ZS30 2694 aa16.15■□□□□ 0.18
SS18-218ENST00000581021 TMEM272A0A1B0GTI8 110 aa16.15■□□□□ 0.18
SS18-218ENST00000581021 SDCBPO00560 298 aaPredicted RBP16.15■□□□□ 0.18
SS18-218ENST00000581021 CA11O75493 328 aa16.15■□□□□ 0.18
SS18-218ENST00000581021 C2orf76Q3KRA6 126 aa16.15■□□□□ 0.18
SS18-218ENST00000581021 SHISA2Q6UWI4 295 aa16.15■□□□□ 0.18
SS18-218ENST00000581021 OR51E2Q9H255 320 aa16.15■□□□□ 0.18
SS18-218ENST00000581021 ABCB10Q9NRK6 738 aa16.15■□□□□ 0.18
SS18-218ENST00000581021 GFOD1Q9NXC2 390 aa16.15■□□□□ 0.18
SS18-218ENST00000581021 FBLN5Q9UBX5 448 aa16.15■□□□□ 0.18
SS18-218ENST00000581021 STEAP1Q9UHE8 339 aa16.15■□□□□ 0.18
SS18-218ENST00000581021 STUB1Q9UNE7 303 aa16.15■□□□□ 0.18
SS18-218ENST00000581021 A0A1B0GUS0 222 aa16.14■□□□□ 0.17
SS18-218ENST00000581021 IFITM5A6NNB3 132 aa16.14■□□□□ 0.17
SS18-218ENST00000581021 SLC31A2O15432 143 aa16.14■□□□□ 0.17
SS18-218ENST00000581021 HBZP02008 142 aa16.14■□□□□ 0.17
SS18-218ENST00000581021 MYL9P24844 172 aa16.14■□□□□ 0.17
SS18-218ENST00000581021 BLVRBP30043 206 aaPredicted RBP16.14■□□□□ 0.17
SS18-218ENST00000581021 FGF9P31371 208 aaPredicted RBP16.14■□□□□ 0.17
SS18-218ENST00000581021 EFNB2P52799 333 aa16.14■□□□□ 0.17
SS18-218ENST00000581021 PRRX1P54821 245 aa16.14■□□□□ 0.17
SS18-218ENST00000581021 LIAT1Q6ZQX7 453 aa16.14■□□□□ 0.17
SS18-218ENST00000581021 OR52M1Q8NGK5 317 aa16.14■□□□□ 0.17
SS18-218ENST00000581021 NEDD4LQ96PU5 975 aa16.14■□□□□ 0.17
SS18-218ENST00000581021 HDHD3Q9BSH5 251 aaPredicted RBP16.14■□□□□ 0.17
SS18-218ENST00000581021 RNF167Q9H6Y7 350 aa16.14■□□□□ 0.17
SS18-218ENST00000581021 PKD1L1Q8TDX9 2849 aa16.13■□□□□ 0.17
SS18-218ENST00000581021 A0A1W2PPI3 338 aa16.13■□□□□ 0.17
SS18-218ENST00000581021 NAPSAO96009 420 aa16.13■□□□□ 0.17
SS18-218ENST00000581021 TMEM50BP56557 158 aa16.13■□□□□ 0.17
SS18-218ENST00000581021 GNMTQ14749 295 aa16.13■□□□□ 0.17
SS18-218ENST00000581021 Q6ZS46 218 aa16.13■□□□□ 0.17
SS18-218ENST00000581021 SLC16A12Q6ZSM3 486 aa16.13■□□□□ 0.17
SS18-218ENST00000581021 PRR18Q8N4B5 295 aa16.13■□□□□ 0.17
SS18-218ENST00000581021 ZNF439Q8NDP4 499 aa16.13■□□□□ 0.17
SS18-218ENST00000581021 ZNF702PQ9H963 129 aa16.13■□□□□ 0.17
SS18-218ENST00000581021 TAF9BQ9HBM6 251 aa16.13■□□□□ 0.17
SS18-218ENST00000581021 PDCD5O14737 125 aa16.12■□□□□ 0.17
SS18-218ENST00000581021 SLC2A2P11168 524 aaPredicted RBP16.12■□□□□ 0.17
SS18-218ENST00000581021 RAB3BP20337 219 aa16.12■□□□□ 0.17
SS18-218ENST00000581021 GADD45AP24522 165 aa16.12■□□□□ 0.17
SS18-218ENST00000581021 HABP2Q14520 560 aaPredicted RBP16.12■□□□□ 0.17
SS18-218ENST00000581021 PLAC9Q5JTB6 97 aa16.12■□□□□ 0.17
SS18-218ENST00000581021 C6orf183Q5T699 404 aa16.12■□□□□ 0.17
SS18-218ENST00000581021 OR10V1Q8NGI7 309 aa16.12■□□□□ 0.17
SS18-218ENST00000581021 OR4C13Q8NGP0 309 aa16.12■□□□□ 0.17
SS18-218ENST00000581021 CFHR4Q92496 578 aa16.12■□□□□ 0.17
SS18-218ENST00000581021 CREB3L1Q96BA8 519 aa16.12■□□□□ 0.17
SS18-218ENST00000581021 RAB18Q9NP72 206 aa16.12■□□□□ 0.17
SS18-218ENST00000581021 AK3Q9UIJ7 227 aa16.12■□□□□ 0.17
SS18-218ENST00000581021 MGAM2Q2M2H8 2515 aa16.11■□□□□ 0.17
SS18-218ENST00000581021 H3BUI4 141 aa16.11■□□□□ 0.17
SS18-218ENST00000581021 CEACAM3P40198 252 aa16.11■□□□□ 0.17
SS18-218ENST00000581021 KIR2DS4P43632 304 aa16.11■□□□□ 0.17
SS18-218ENST00000581021 VEGFCP49767 419 aa16.11■□□□□ 0.17
SS18-218ENST00000581021 PSMD7P51665 324 aa16.11■□□□□ 0.17
SS18-218ENST00000581021 ZNF134P52741 427 aa16.11■□□□□ 0.17
SS18-218ENST00000581021 MADCAM1Q13477 382 aa16.11■□□□□ 0.17
SS18-218ENST00000581021 HMGN3Q15651 99 aa16.11■□□□□ 0.17
SS18-218ENST00000581021 MOGAT2Q3SYC2 334 aa16.11■□□□□ 0.17
SS18-218ENST00000581021 ZNF880Q6PDB4 577 aa16.11■□□□□ 0.17
SS18-218ENST00000581021 TOMM40LQ969M1 308 aa16.11■□□□□ 0.17
SS18-218ENST00000581021 RPEQ96AT9 228 aa16.11■□□□□ 0.17
SS18-218ENST00000581021 ARHGAP5-AS1Q96IT6 56 aa16.11■□□□□ 0.17
SS18-218ENST00000581021 CITED1Q99966 193 aa16.11■□□□□ 0.17
SS18-218ENST00000581021 CHCHD6Q9BRQ6 235 aa16.11■□□□□ 0.17
SS18-218ENST00000581021 URM1Q9BTM9 101 aaKnown RBP16.11■□□□□ 0.17
SS18-218ENST00000581021 NPFFR1Q9GZQ6 430 aa16.11■□□□□ 0.17
SS18-218ENST00000581021 RANBP3Q9H6Z4 567 aaPredicted RBP16.11■□□□□ 0.17
SS18-218ENST00000581021 LIN7BQ9HAP6 207 aa16.11■□□□□ 0.17
SS18-218ENST00000581021 AMMECR1Q9Y4X0 333 aaPredicted RBP16.11■□□□□ 0.17
SS18-218ENST00000581021 OOSP1A8MZH6 123 aa16.1■□□□□ 0.17
SS18-218ENST00000581021 TIMM23O14925 209 aa16.1■□□□□ 0.17
SS18-218ENST00000581021 SPINT2O43291 252 aa16.1■□□□□ 0.17
SS18-218ENST00000581021 BLCAPP62952 87 aa16.1■□□□□ 0.17
SS18-218ENST00000581021 HIST2H2BDQ6DRA6 164 aa16.1■□□□□ 0.17
SS18-218ENST00000581021 Q8N2B8 174 aa16.1■□□□□ 0.17
SS18-218ENST00000581021 LINC00311Q8N616 119 aa16.1■□□□□ 0.17
SS18-218ENST00000581021 C8orf31Q8N9H6 132 aa16.1■□□□□ 0.17
SS18-218ENST00000581021 OR52L2PQ8NGH6 319 aa16.1■□□□□ 0.17
SS18-218ENST00000581021 OR10X1Q8NGY0 326 aa16.1■□□□□ 0.17
SS18-218ENST00000581021 OR56B4Q8NH76 319 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms