RNA–Protein interactions for RNA: ENST00000579716.2

COPS3-216, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 419 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-216ENST00000579716 UBIAD1Q9Y5Z9 338 aa5.36□□□□□ -1.55
COPS3-216ENST00000579716 SOX21Q9Y651 276 aaPredicted RBP5.36□□□□□ -1.55
COPS3-216ENST00000579716 CACNA1FO60840 1977 aa5.36□□□□□ -1.55
COPS3-216ENST00000579716 ARHGEF11O15085 1522 aa5.35□□□□□ -1.55
COPS3-216ENST00000579716 HFM1A2PYH4 1435 aa5.35□□□□□ -1.55
COPS3-216ENST00000579716 PLCH2O75038 1416 aa5.35□□□□□ -1.55
COPS3-216ENST00000579716 NFASCO94856 1347 aa5.35□□□□□ -1.55
COPS3-216ENST00000579716 MEIS3P1A6NDR6 274 aa5.35□□□□□ -1.55
COPS3-216ENST00000579716 KRTAP29-1A8MX34 341 aaPredicted RBP5.35□□□□□ -1.55
COPS3-216ENST00000579716 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.35□□□□□ -1.55
COPS3-216ENST00000579716 J3QRK9 145 aa5.35□□□□□ -1.55
COPS3-216ENST00000579716 PDCD5O14737 125 aa5.35□□□□□ -1.55
COPS3-216ENST00000579716 RAMP1O60894 148 aa5.35□□□□□ -1.55
COPS3-216ENST00000579716 ICOSLGO75144 302 aa5.35□□□□□ -1.55
COPS3-216ENST00000579716 MPC2O95563 127 aa5.35□□□□□ -1.55
COPS3-216ENST00000579716 AIFM1O95831 613 aa5.35□□□□□ -1.55
COPS3-216ENST00000579716 CSN2P05814 226 aa5.35□□□□□ -1.55
COPS3-216ENST00000579716 ZSCAN5DPP0CG00 497 aa5.35□□□□□ -1.55
COPS3-216ENST00000579716 HIST1H1DP16402 221 aaKnown RBP5.35□□□□□ -1.55
COPS3-216ENST00000579716 SELEP16581 610 aa5.35□□□□□ -1.55
COPS3-216ENST00000579716 CXCL3P19876 107 aa5.35□□□□□ -1.55
COPS3-216ENST00000579716 NTF3P20783 257 aa5.35□□□□□ -1.55
COPS3-216ENST00000579716 CXCL12P48061 93 aa5.35□□□□□ -1.55
COPS3-216ENST00000579716 APOC4P55056 127 aa5.35□□□□□ -1.55
COPS3-216ENST00000579716 MEF2BQ02080 365 aaPredicted RBP5.35□□□□□ -1.55
COPS3-216ENST00000579716 VAX1Q5SQQ9 334 aa5.35□□□□□ -1.55
COPS3-216ENST00000579716 GLYATL3Q5SZD4 288 aa5.35□□□□□ -1.55
COPS3-216ENST00000579716 LCE1AQ5T7P2 110 aa5.35□□□□□ -1.55
COPS3-216ENST00000579716 BCL2L15Q5TBC7 163 aa5.35□□□□□ -1.55
COPS3-216ENST00000579716 OR4C11Q6IEV9 310 aa5.35□□□□□ -1.55
COPS3-216ENST00000579716 TRNP1Q6NT89 227 aa5.35□□□□□ -1.55
COPS3-216ENST00000579716 GLIPR1L1Q6UWM5 242 aa5.35□□□□□ -1.55
COPS3-216ENST00000579716 C9orf139Q6ZV77 190 aa5.35□□□□□ -1.55
COPS3-216ENST00000579716 CDC20BQ86Y33 519 aa5.35□□□□□ -1.55
COPS3-216ENST00000579716 C20orf196Q8IYI0 205 aa5.35□□□□□ -1.55
COPS3-216ENST00000579716 PRR22Q8IZ63 422 aa5.35□□□□□ -1.55
COPS3-216ENST00000579716 FER1L6-AS1Q8NA97 138 aa5.35□□□□□ -1.55
COPS3-216ENST00000579716 SPATA3Q8NHX4 192 aa5.35□□□□□ -1.55
COPS3-216ENST00000579716 WBP1Q96G27 269 aa5.35□□□□□ -1.55
COPS3-216ENST00000579716 ZNF419Q96HQ0 510 aaPredicted RBP5.35□□□□□ -1.55
COPS3-216ENST00000579716 DERL3Q96Q80 235 aa5.35□□□□□ -1.55
COPS3-216ENST00000579716 TSPAN32Q96QS1 320 aa5.35□□□□□ -1.55
COPS3-216ENST00000579716 PLEKHF1Q96S99 279 aa5.35□□□□□ -1.55
COPS3-216ENST00000579716 NRTNQ99748 197 aa5.35□□□□□ -1.55
COPS3-216ENST00000579716 PRADC1Q9BSG0 188 aa5.35□□□□□ -1.55
COPS3-216ENST00000579716 RERGLQ9H628 205 aa5.35□□□□□ -1.55
COPS3-216ENST00000579716 C3orf14Q9HBI5 128 aa5.35□□□□□ -1.55
COPS3-216ENST00000579716 NOX3Q9HBY0 568 aa5.35□□□□□ -1.55
COPS3-216ENST00000579716 AKIP1Q9NQ31 210 aa5.35□□□□□ -1.55
COPS3-216ENST00000579716 SERTAD4Q9NUC0 356 aa5.35□□□□□ -1.55
COPS3-216ENST00000579716 PZPP20742 1482 aa5.34□□□□□ -1.55
COPS3-216ENST00000579716 MLH3Q9UHC1 1453 aa5.34□□□□□ -1.55
COPS3-216ENST00000579716 LOC102724200A0A096LPH7 203 aaPredicted RBP5.34□□□□□ -1.55
COPS3-216ENST00000579716 TRAV5A0A0B4J249 113 aa5.34□□□□□ -1.55
COPS3-216ENST00000579716 TRBV5-5A0A0J9YX44 114 aa5.34□□□□□ -1.55
COPS3-216ENST00000579716 GAGE12HA6NDE8 117 aa5.34□□□□□ -1.55
COPS3-216ENST00000579716 RBFOX3A6NFN3 312 aa5.34□□□□□ -1.55
COPS3-216ENST00000579716 TMEM178BH3BS89 294 aa5.34□□□□□ -1.55
COPS3-216ENST00000579716 K7EMT4 169 aa5.34□□□□□ -1.55
COPS3-216ENST00000579716 K7EPK0 472 aa5.34□□□□□ -1.55
COPS3-216ENST00000579716 WNT9BO14905 357 aa5.34□□□□□ -1.55
COPS3-216ENST00000579716 EDIL3O43854 480 aa5.34□□□□□ -1.55
COPS3-216ENST00000579716 MRPS14O60783 128 aaKnown RBP5.34□□□□□ -1.55
COPS3-216ENST00000579716 EDF1O60869 148 aaKnown RBP5.34□□□□□ -1.55
COPS3-216ENST00000579716 NXPH3O95157 252 aa5.34□□□□□ -1.55
COPS3-216ENST00000579716 SLC35G6P0C7Q6 338 aa5.34□□□□□ -1.55
COPS3-216ENST00000579716 LIFP15018 202 aa5.34□□□□□ -1.55
COPS3-216ENST00000579716 ZNF19P17023 458 aa5.34□□□□□ -1.55
COPS3-216ENST00000579716 CSRP1P21291 193 aaKnown RBP5.34□□□□□ -1.55
COPS3-216ENST00000579716 CA6P23280 308 aa5.34□□□□□ -1.55
COPS3-216ENST00000579716 SAA4P35542 130 aa5.34□□□□□ -1.55
COPS3-216ENST00000579716 TGFBR1P36897 503 aa5.34□□□□□ -1.55
COPS3-216ENST00000579716 GUCA1AP43080 201 aaPredicted RBP5.34□□□□□ -1.55
COPS3-216ENST00000579716 HNRNPA3P51991 378 aaKnown RBP5.34□□□□□ -1.55
COPS3-216ENST00000579716 TMBIM6P55061 237 aa5.34□□□□□ -1.55
COPS3-216ENST00000579716 BACE1P56817 501 aa5.34□□□□□ -1.55
COPS3-216ENST00000579716 RND3P61587 244 aa5.34□□□□□ -1.55
COPS3-216ENST00000579716 PSG7Q13046 419 aa5.34□□□□□ -1.55
COPS3-216ENST00000579716 CTF1Q16619 201 aa5.34□□□□□ -1.55
COPS3-216ENST00000579716 FHL5Q5TD97 284 aa5.34□□□□□ -1.55
COPS3-216ENST00000579716 SP5Q6BEB4 398 aaPredicted RBP5.34□□□□□ -1.55
COPS3-216ENST00000579716 ZNF773Q6PK81 442 aa5.34□□□□□ -1.55
COPS3-216ENST00000579716 RASL11AQ6T310 242 aa5.34□□□□□ -1.55
COPS3-216ENST00000579716 Q6ZVH6 145 aa5.34□□□□□ -1.55
COPS3-216ENST00000579716 ZNF550Q7Z398 422 aa5.34□□□□□ -1.55
COPS3-216ENST00000579716 GKN2Q86XP6 184 aa5.34□□□□□ -1.55
COPS3-216ENST00000579716 ZNF664Q8N3J9 261 aa5.34□□□□□ -1.55
COPS3-216ENST00000579716 FAM71E2Q8N5Q1 922 aa5.34□□□□□ -1.55
COPS3-216ENST00000579716 OR11G2Q8NGC1 345 aa5.34□□□□□ -1.55
COPS3-216ENST00000579716 OR51T1Q8NGJ9 327 aa5.34□□□□□ -1.55
COPS3-216ENST00000579716 CT55Q8WUE5 264 aa5.34□□□□□ -1.55
COPS3-216ENST00000579716 BLNKQ8WV28 456 aa5.34□□□□□ -1.55
COPS3-216ENST00000579716 RTBDNQ9BSG5 229 aaPredicted RBP5.34□□□□□ -1.55
COPS3-216ENST00000579716 LRRC61Q9BV99 259 aa5.34□□□□□ -1.55
COPS3-216ENST00000579716 SPANXDQ9BXN6 97 aa5.34□□□□□ -1.55
COPS3-216ENST00000579716 TMEM222Q9H0R3 208 aa5.34□□□□□ -1.55
COPS3-216ENST00000579716 TMEM30AQ9NV96 361 aa5.34□□□□□ -1.55
COPS3-216ENST00000579716 LAMTOR3Q9UHA4 124 aa5.34□□□□□ -1.55
COPS3-216ENST00000579716 KCNE5Q9UJ90 142 aa5.34□□□□□ -1.55
COPS3-216ENST00000579716 CYSLTR1Q9Y271 337 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms