RNA–Protein interactions for RNA: ENST00000579329.1

LIMD2-207, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 920 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-207ENST00000579329 OR4C13Q8NGP0 309 aa19.27■□□□□ 0.68
LIMD2-207ENST00000579329 WFDC12Q8WWY7 111 aa19.27■□□□□ 0.68
LIMD2-207ENST00000579329 FAM3DQ96BQ1 224 aa19.27■□□□□ 0.68
LIMD2-207ENST00000579329 LPAR5Q9H1C0 372 aa19.27■□□□□ 0.68
LIMD2-207ENST00000579329 RANBP3Q9H6Z4 567 aaPredicted RBP19.27■□□□□ 0.68
LIMD2-207ENST00000579329 SHISA3A0PJX4 238 aa19.26■□□□□ 0.67
LIMD2-207ENST00000579329 C12orf77C9JDV5 145 aa19.26■□□□□ 0.67
LIMD2-207ENST00000579329 LY6LH3BQJ8 138 aa19.26■□□□□ 0.67
LIMD2-207ENST00000579329 SPINT2O43291 252 aa19.26■□□□□ 0.67
LIMD2-207ENST00000579329 IGHV3-7P01780 117 aa19.26■□□□□ 0.67
LIMD2-207ENST00000579329 BRS3P32247 399 aa19.26■□□□□ 0.67
LIMD2-207ENST00000579329 GNG10P50151 68 aa19.26■□□□□ 0.67
LIMD2-207ENST00000579329 CLDN12P56749 244 aa19.26■□□□□ 0.67
LIMD2-207ENST00000579329 TMEM30BQ3MIR4 351 aa19.26■□□□□ 0.67
LIMD2-207ENST00000579329 HES5Q5TA89 166 aa19.26■□□□□ 0.67
LIMD2-207ENST00000579329 CCDC144NLQ6NUI1 221 aa19.26■□□□□ 0.67
LIMD2-207ENST00000579329 UBALD1Q8TB05 177 aa19.26■□□□□ 0.67
LIMD2-207ENST00000579329 SULT4A1Q9BR01 284 aa19.26■□□□□ 0.67
LIMD2-207ENST00000579329 NPFFR1Q9GZQ6 430 aa19.26■□□□□ 0.67
LIMD2-207ENST00000579329 GFOD1Q9NXC2 390 aa19.26■□□□□ 0.67
LIMD2-207ENST00000579329 FBLN5Q9UBX5 448 aa19.26■□□□□ 0.67
LIMD2-207ENST00000579329 STEAP1Q9UHE8 339 aa19.26■□□□□ 0.67
LIMD2-207ENST00000579329 STUB1Q9UNE7 303 aa19.26■□□□□ 0.67
LIMD2-207ENST00000579329 KCNAB3O43448 404 aa19.25■□□□□ 0.67
LIMD2-207ENST00000579329 RAB3BP20337 219 aa19.25■□□□□ 0.67
LIMD2-207ENST00000579329 BLVRBP30043 206 aaPredicted RBP19.25■□□□□ 0.67
LIMD2-207ENST00000579329 FGF9P31371 208 aaPredicted RBP19.25■□□□□ 0.67
LIMD2-207ENST00000579329 CCBE1Q6UXH8 406 aaPredicted RBP19.25■□□□□ 0.67
LIMD2-207ENST00000579329 C6orf201Q7Z4U5 140 aa19.25■□□□□ 0.67
LIMD2-207ENST00000579329 MRPL30Q8TCC3 161 aaKnown RBP19.25■□□□□ 0.67
LIMD2-207ENST00000579329 TOMM40LQ969M1 308 aa19.25■□□□□ 0.67
LIMD2-207ENST00000579329 RPEQ96AT9 228 aa19.25■□□□□ 0.67
LIMD2-207ENST00000579329 CYYR1Q96J86 154 aa19.25■□□□□ 0.67
LIMD2-207ENST00000579329 MBNL3Q9NUK0 354 aaKnown RBP19.25■□□□□ 0.67
LIMD2-207ENST00000579329 KCNIP1Q9NZI2 227 aa19.25■□□□□ 0.67
LIMD2-207ENST00000579329 A0A0A6YYD4 124 aa19.24■□□□□ 0.67
LIMD2-207ENST00000579329 RCC1P18754 421 aaPredicted RBP19.24■□□□□ 0.67
LIMD2-207ENST00000579329 MNDAP41218 407 aa19.24■□□□□ 0.67
LIMD2-207ENST00000579329 OR10A3P58181 314 aa19.24■□□□□ 0.67
LIMD2-207ENST00000579329 NEDD8Q15843 81 aa19.24■□□□□ 0.67
LIMD2-207ENST00000579329 ZNF554Q86TJ5 538 aa19.24■□□□□ 0.67
LIMD2-207ENST00000579329 TMEM219Q86XT9 240 aa19.24■□□□□ 0.67
LIMD2-207ENST00000579329 FAM89BQ8N5H3 189 aa19.24■□□□□ 0.67
LIMD2-207ENST00000579329 DTX3Q8N9I9 347 aa19.24■□□□□ 0.67
LIMD2-207ENST00000579329 FAAP24Q9BTP7 215 aa19.24■□□□□ 0.67
LIMD2-207ENST00000579329 PLEKHJ1Q9NW61 149 aa19.24■□□□□ 0.67
LIMD2-207ENST00000579329 TXNL4BQ9NX01 149 aaKnown RBP19.24■□□□□ 0.67
LIMD2-207ENST00000579329 SSR3Q9UNL2 185 aa19.24■□□□□ 0.67
LIMD2-207ENST00000579329 HBZP02008 142 aa19.23■□□□□ 0.67
LIMD2-207ENST00000579329 LOXL3P58215 753 aa19.23■□□□□ 0.67
LIMD2-207ENST00000579329 PROK1P58294 105 aa19.23■□□□□ 0.67
LIMD2-207ENST00000579329 MADCAM1Q13477 382 aa19.23■□□□□ 0.67
LIMD2-207ENST00000579329 C2orf76Q3KRA6 126 aa19.23■□□□□ 0.67
LIMD2-207ENST00000579329 Q3ZCU0 254 aa19.23■□□□□ 0.67
LIMD2-207ENST00000579329 PRR18Q8N4B5 295 aa19.23■□□□□ 0.67
LIMD2-207ENST00000579329 OR10X1Q8NGY0 326 aa19.23■□□□□ 0.67
LIMD2-207ENST00000579329 SGMS2Q8NHU3 365 aa19.23■□□□□ 0.67
LIMD2-207ENST00000579329 TAF9BQ9HBM6 251 aa19.23■□□□□ 0.67
LIMD2-207ENST00000579329 PKD1L1Q8TDX9 2849 aa19.23■□□□□ 0.67
LIMD2-207ENST00000579329 IGHV3-43A0A0B4J1X8 118 aa19.22■□□□□ 0.67
LIMD2-207ENST00000579329 IFITM5A6NNB3 132 aa19.22■□□□□ 0.67
LIMD2-207ENST00000579329 LDLRAD4O15165 306 aa19.22■□□□□ 0.67
LIMD2-207ENST00000579329 SOCS1O15524 211 aa19.22■□□□□ 0.67
LIMD2-207ENST00000579329 IGHV3-43DP0DP04 118 aa19.22■□□□□ 0.67
LIMD2-207ENST00000579329 KIR2DS4P43632 304 aa19.22■□□□□ 0.67
LIMD2-207ENST00000579329 C8orf31Q8N9H6 132 aa19.22■□□□□ 0.67
LIMD2-207ENST00000579329 OR1L1Q8NH94 360 aa19.22■□□□□ 0.67
LIMD2-207ENST00000579329 GNG12Q9UBI6 72 aa19.22■□□□□ 0.67
LIMD2-207ENST00000579329 TMEM272A0A1B0GTI8 110 aa19.21■□□□□ 0.67
LIMD2-207ENST00000579329 A0A1W2PPE3 182 aa19.21■□□□□ 0.67
LIMD2-207ENST00000579329 TNFAIP8O95379 198 aa19.21■□□□□ 0.67
LIMD2-207ENST00000579329 LINC00311Q8N616 119 aa19.21■□□□□ 0.67
LIMD2-207ENST00000579329 OR56B1Q8NGI3 324 aa19.21■□□□□ 0.67
LIMD2-207ENST00000579329 OR2T6Q8NHC8 308 aa19.21■□□□□ 0.67
LIMD2-207ENST00000579329 CHMP1AQ9HD42 196 aaPredicted RBP19.21■□□□□ 0.67
LIMD2-207ENST00000579329 RAB22AQ9UL26 194 aa19.21■□□□□ 0.67
LIMD2-207ENST00000579329 HSF4Q9ULV5 492 aa19.21■□□□□ 0.67
LIMD2-207ENST00000579329 FOXI3A8MTJ6 420 aaPredicted RBP19.2■□□□□ 0.66
LIMD2-207ENST00000579329 VEGFCP49767 419 aa19.2■□□□□ 0.66
LIMD2-207ENST00000579329 RAB7AP51149 207 aa19.2■□□□□ 0.66
LIMD2-207ENST00000579329 C16orf82Q7Z2V1 217 aa19.2■□□□□ 0.66
LIMD2-207ENST00000579329 OCSTAMPQ9BR26 566 aa19.2■□□□□ 0.66
LIMD2-207ENST00000579329 OR51E2Q9H255 320 aa19.2■□□□□ 0.66
LIMD2-207ENST00000579329 RIMS4Q9H426 269 aaPredicted RBP19.2■□□□□ 0.66
LIMD2-207ENST00000579329 A0A087WXM4 84 aa19.19■□□□□ 0.66
LIMD2-207ENST00000579329 NAPSAO96009 420 aa19.19■□□□□ 0.66
LIMD2-207ENST00000579329 CD24P25063 80 aa19.19■□□□□ 0.66
LIMD2-207ENST00000579329 IL3RAP26951 378 aa19.19■□□□□ 0.66
LIMD2-207ENST00000579329 FAM53AQ6NSI3 398 aaPredicted RBP19.19■□□□□ 0.66
LIMD2-207ENST00000579329 C11orf88Q6PI97 169 aa19.19■□□□□ 0.66
LIMD2-207ENST00000579329 MOB1BQ7L9L4 216 aa19.19■□□□□ 0.66
LIMD2-207ENST00000579329 TPRA1Q86W33 373 aa19.19■□□□□ 0.66
LIMD2-207ENST00000579329 OR8H3Q8N146 312 aa19.19■□□□□ 0.66
LIMD2-207ENST00000579329 OR10V1Q8NGI7 309 aa19.19■□□□□ 0.66
LIMD2-207ENST00000579329 AKR1E2Q96JD6 320 aa19.19■□□□□ 0.66
LIMD2-207ENST00000579329 LIN7BQ9HAP6 207 aa19.19■□□□□ 0.66
LIMD2-207ENST00000579329 VCX3AQ9NNX9 186 aa19.19■□□□□ 0.66
LIMD2-207ENST00000579329 HSD17B6O14756 317 aa19.18■□□□□ 0.66
LIMD2-207ENST00000579329 CD36P16671 472 aa19.18■□□□□ 0.66
LIMD2-207ENST00000579329 EFNB2P52799 333 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms