RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 KRTAP10-3P60369 221 aa10.31□□□□□ -0.76
CCDC57-211ENST00000578187 DYNC1I2Q13409 638 aaKnown RBP10.31□□□□□ -0.76
CCDC57-211ENST00000578187 NKAPLQ5M9Q1 402 aa10.31□□□□□ -0.76
CCDC57-211ENST00000578187 UTF1Q5T230 341 aa10.31□□□□□ -0.76
CCDC57-211ENST00000578187 HES5Q5TA89 166 aa10.31□□□□□ -0.76
CCDC57-211ENST00000578187 ABHD12Q8N2K0 398 aa10.31□□□□□ -0.76
CCDC57-211ENST00000578187 FAM89BQ8N5H3 189 aa10.31□□□□□ -0.76
CCDC57-211ENST00000578187 ZNF596Q8TC21 504 aa10.31□□□□□ -0.76
CCDC57-211ENST00000578187 MALSU1Q96EH3 234 aa10.31□□□□□ -0.76
CCDC57-211ENST00000578187 URM1Q9BTM9 101 aaKnown RBP10.31□□□□□ -0.76
CCDC57-211ENST00000578187 NPFFR1Q9GZQ6 430 aa10.31□□□□□ -0.76
CCDC57-211ENST00000578187 RANBP3Q9H6Z4 567 aaPredicted RBP10.31□□□□□ -0.76
CCDC57-211ENST00000578187 VCX3AQ9NNX9 186 aa10.31□□□□□ -0.76
CCDC57-211ENST00000578187 TMEM272A0A1B0GTI8 110 aa10.3□□□□□ -0.76
CCDC57-211ENST00000578187 UBE2QL1A1L167 161 aa10.3□□□□□ -0.76
CCDC57-211ENST00000578187 VGLL3A8MV65 326 aa10.3□□□□□ -0.76
CCDC57-211ENST00000578187 ORC5O43913 435 aa10.3□□□□□ -0.76
CCDC57-211ENST00000578187 JUNBP17275 347 aaPredicted RBP10.3□□□□□ -0.76
CCDC57-211ENST00000578187 GADD45AP24522 165 aa10.3□□□□□ -0.76
CCDC57-211ENST00000578187 NFYBP25208 207 aa10.3□□□□□ -0.76
CCDC57-211ENST00000578187 PAX6P26367 422 aa10.3□□□□□ -0.76
CCDC57-211ENST00000578187 HERPUD1Q15011 391 aa10.3□□□□□ -0.76
CCDC57-211ENST00000578187 LY6EQ16553 131 aa10.3□□□□□ -0.76
CCDC57-211ENST00000578187 C2orf76Q3KRA6 126 aa10.3□□□□□ -0.76
CCDC57-211ENST00000578187 TPRA1Q86W33 373 aa10.3□□□□□ -0.76
CCDC57-211ENST00000578187 MRPL30Q8TCC3 161 aaKnown RBP10.3□□□□□ -0.76
CCDC57-211ENST00000578187 CCDC107Q8WV48 283 aa10.3□□□□□ -0.76
CCDC57-211ENST00000578187 NEDD4LQ96PU5 975 aa10.3□□□□□ -0.76
CCDC57-211ENST00000578187 SULT4A1Q9BR01 284 aa10.3□□□□□ -0.76
CCDC57-211ENST00000578187 CHCHD6Q9BRQ6 235 aa10.3□□□□□ -0.76
CCDC57-211ENST00000578187 ABCB10Q9NRK6 738 aa10.3□□□□□ -0.76
CCDC57-211ENST00000578187 MBNL3Q9NUK0 354 aaKnown RBP10.3□□□□□ -0.76
CCDC57-211ENST00000578187 NOTOA8MTQ0 251 aa10.29□□□□□ -0.76
CCDC57-211ENST00000578187 C12orf77C9JDV5 145 aa10.29□□□□□ -0.76
CCDC57-211ENST00000578187 F2RL2O00254 374 aa10.29□□□□□ -0.76
CCDC57-211ENST00000578187 HTR1DP28221 377 aa10.29□□□□□ -0.76
CCDC57-211ENST00000578187 BLVRBP30043 206 aaPredicted RBP10.29□□□□□ -0.76
CCDC57-211ENST00000578187 HLA-DRB5Q30154 266 aa10.29□□□□□ -0.76
CCDC57-211ENST00000578187 C6orf183Q5T699 404 aa10.29□□□□□ -0.76
CCDC57-211ENST00000578187 TRAT1Q6PIZ9 186 aa10.29□□□□□ -0.76
CCDC57-211ENST00000578187 SLC16A12Q6ZSM3 486 aa10.29□□□□□ -0.76
CCDC57-211ENST00000578187 C6orf201Q7Z4U5 140 aa10.29□□□□□ -0.76
CCDC57-211ENST00000578187 OR52M1Q8NGK5 317 aa10.29□□□□□ -0.76
CCDC57-211ENST00000578187 OR4K15Q8NH41 348 aa10.29□□□□□ -0.76
CCDC57-211ENST00000578187 OR9G1Q8NH87 305 aa10.29□□□□□ -0.76
CCDC57-211ENST00000578187 RFESDQ8TAC1 157 aa10.29□□□□□ -0.76
CCDC57-211ENST00000578187 FAM110DQ8TAY7 271 aaPredicted RBP10.29□□□□□ -0.76
CCDC57-211ENST00000578187 PIFOQ8TCI5 191 aa10.29□□□□□ -0.76
CCDC57-211ENST00000578187 YIPF6Q96EC8 236 aa10.29□□□□□ -0.76
CCDC57-211ENST00000578187 KCTD7Q96MP8 289 aa10.29□□□□□ -0.76
CCDC57-211ENST00000578187 LIN7BQ9HAP6 207 aa10.29□□□□□ -0.76
CCDC57-211ENST00000578187 TRAPPC2LQ9UL33 140 aa10.29□□□□□ -0.76
CCDC57-211ENST00000578187 HSF4Q9ULV5 492 aa10.29□□□□□ -0.76
CCDC57-211ENST00000578187 LOC100506127A0A0U1RQW1 187 aa10.28□□□□□ -0.76
CCDC57-211ENST00000578187 SMIM30A4D0T7 59 aa10.28□□□□□ -0.76
CCDC57-211ENST00000578187 BUB1B-PAK6H3BSN5 160 aa10.28□□□□□ -0.76
CCDC57-211ENST00000578187 SOCS1O15524 211 aa10.28□□□□□ -0.76
CCDC57-211ENST00000578187 PEX14O75381 377 aa10.28□□□□□ -0.76
CCDC57-211ENST00000578187 TSPAN15O95858 294 aa10.28□□□□□ -0.76
CCDC57-211ENST00000578187 SMIM18P0DKX4 95 aa10.28□□□□□ -0.76
CCDC57-211ENST00000578187 RCC1P18754 421 aaPredicted RBP10.28□□□□□ -0.76
CCDC57-211ENST00000578187 RAB6AP20340 208 aa10.28□□□□□ -0.76
CCDC57-211ENST00000578187 KIR2DS4P43632 304 aa10.28□□□□□ -0.76
CCDC57-211ENST00000578187 DYNLT3P51808 116 aa10.28□□□□□ -0.76
CCDC57-211ENST00000578187 PRRX1P54821 245 aa10.28□□□□□ -0.76
CCDC57-211ENST00000578187 LOXL3P58215 753 aa10.28□□□□□ -0.76
CCDC57-211ENST00000578187 PLA2G7Q13093 441 aa10.28□□□□□ -0.76
CCDC57-211ENST00000578187 SSX2Q16385 188 aa10.28□□□□□ -0.76
CCDC57-211ENST00000578187 LTC4SQ16873 150 aa10.28□□□□□ -0.76
CCDC57-211ENST00000578187 TMEM30BQ3MIR4 351 aa10.28□□□□□ -0.76
CCDC57-211ENST00000578187 Q6ZPA2 131 aa10.28□□□□□ -0.76
CCDC57-211ENST00000578187 ZNF554Q86TJ5 538 aa10.28□□□□□ -0.76
CCDC57-211ENST00000578187 OR56B1Q8NGI3 324 aa10.28□□□□□ -0.76
CCDC57-211ENST00000578187 NDNFQ8TB73 568 aa10.28□□□□□ -0.76
CCDC57-211ENST00000578187 ARL11Q969Q4 196 aa10.28□□□□□ -0.76
CCDC57-211ENST00000578187 CREB3L1Q96BA8 519 aa10.28□□□□□ -0.76
CCDC57-211ENST00000578187 FAAP24Q9BTP7 215 aa10.28□□□□□ -0.76
CCDC57-211ENST00000578187 CENPOQ9BU64 300 aa10.28□□□□□ -0.76
CCDC57-211ENST00000578187 MMP28Q9H239 520 aa10.28□□□□□ -0.76
CCDC57-211ENST00000578187 RNF167Q9H6Y7 350 aa10.28□□□□□ -0.76
CCDC57-211ENST00000578187 RAB9BQ9NP90 201 aa10.28□□□□□ -0.76
CCDC57-211ENST00000578187 GFOD1Q9NXC2 390 aa10.28□□□□□ -0.76
CCDC57-211ENST00000578187 DPM3Q9P2X0 92 aa10.28□□□□□ -0.76
CCDC57-211ENST00000578187 PITPNC1Q9UKF7 332 aa10.28□□□□□ -0.76
CCDC57-211ENST00000578187 RAB22AQ9UL26 194 aa10.28□□□□□ -0.76
CCDC57-211ENST00000578187 PSG11Q9UQ72 335 aa10.28□□□□□ -0.76
CCDC57-211ENST00000578187 A0A0B4J203 849 aa10.27□□□□□ -0.77
CCDC57-211ENST00000578187 LEUTXA8MZ59 168 aa10.27□□□□□ -0.77
CCDC57-211ENST00000578187 LY6LH3BQJ8 138 aa10.27□□□□□ -0.77
CCDC57-211ENST00000578187 J3QR06 171 aa10.27□□□□□ -0.77
CCDC57-211ENST00000578187 SDCBPO00560 298 aaPredicted RBP10.27□□□□□ -0.77
CCDC57-211ENST00000578187 TOR1AO14656 332 aa10.27□□□□□ -0.77
CCDC57-211ENST00000578187 NAPSAO96009 420 aa10.27□□□□□ -0.77
CCDC57-211ENST00000578187 SDC2P34741 201 aa10.27□□□□□ -0.77
CCDC57-211ENST00000578187 CEACAM3P40198 252 aa10.27□□□□□ -0.77
CCDC57-211ENST00000578187 VEGFCP49767 419 aa10.27□□□□□ -0.77
CCDC57-211ENST00000578187 EFNB2P52799 333 aa10.27□□□□□ -0.77
CCDC57-211ENST00000578187 TMEM50BP56557 158 aa10.27□□□□□ -0.77
CCDC57-211ENST00000578187 FAM189A2Q15884 450 aa10.27□□□□□ -0.77
CCDC57-211ENST00000578187 TIMM50Q3ZCQ8 353 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms