RNA–Protein interactions for RNA: ENST00000578044.5

SMARCE1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-213ENST00000578044 SDCBPO00560 298 aaPredicted RBP11.46□□□□□ -0.57
SMARCE1-213ENST00000578044 SPINT2O43291 252 aa11.46□□□□□ -0.57
SMARCE1-213ENST00000578044 UBBP0CG47 229 aa11.46□□□□□ -0.57
SMARCE1-213ENST00000578044 CD37P11049 281 aa11.46□□□□□ -0.57
SMARCE1-213ENST00000578044 SERPINA2P20848 420 aa11.46□□□□□ -0.57
SMARCE1-213ENST00000578044 WNT4P56705 351 aa11.46□□□□□ -0.57
SMARCE1-213ENST00000578044 RPL23AP62750 156 aaKnown RBP11.46□□□□□ -0.57
SMARCE1-213ENST00000578044 DCTN2Q13561 401 aaKnown RBP11.46□□□□□ -0.57
SMARCE1-213ENST00000578044 HIST2H2BDQ6DRA6 164 aa11.46□□□□□ -0.57
SMARCE1-213ENST00000578044 C8orf59Q8N0T1 100 aaPredicted RBP11.46□□□□□ -0.57
SMARCE1-213ENST00000578044 MS4A15Q8N5U1 240 aa11.46□□□□□ -0.57
SMARCE1-213ENST00000578044 LINC00482Q8N8I6 264 aa11.46□□□□□ -0.57
SMARCE1-213ENST00000578044 ZNF439Q8NDP4 499 aa11.46□□□□□ -0.57
SMARCE1-213ENST00000578044 MRAPQ8TCY5 172 aa11.46□□□□□ -0.57
SMARCE1-213ENST00000578044 EAF1Q96JC9 268 aaPredicted RBP11.46□□□□□ -0.57
SMARCE1-213ENST00000578044 DERL3Q96Q80 235 aa11.46□□□□□ -0.57
SMARCE1-213ENST00000578044 FKBP14Q9NWM8 211 aa11.46□□□□□ -0.57
SMARCE1-213ENST00000578044 MRPS28Q9Y2Q9 187 aaKnown RBP11.46□□□□□ -0.57
SMARCE1-213ENST00000578044 TRAV8-7A0A075B6U6 113 aa11.45□□□□□ -0.58
SMARCE1-213ENST00000578044 AIPO00170 330 aa11.45□□□□□ -0.58
SMARCE1-213ENST00000578044 LANCL1O43813 399 aa11.45□□□□□ -0.58
SMARCE1-213ENST00000578044 IGKV1D-33P01593 117 aa11.45□□□□□ -0.58
SMARCE1-213ENST00000578044 IGKV1-33P01594 117 aa11.45□□□□□ -0.58
SMARCE1-213ENST00000578044 FUT3P21217 361 aa11.45□□□□□ -0.58
SMARCE1-213ENST00000578044 CAPGP40121 348 aa11.45□□□□□ -0.58
SMARCE1-213ENST00000578044 MYCNOSP40205 109 aa11.45□□□□□ -0.58
SMARCE1-213ENST00000578044 THBS3P49746 956 aa11.45□□□□□ -0.58
SMARCE1-213ENST00000578044 GPR50Q13585 617 aa11.45□□□□□ -0.58
SMARCE1-213ENST00000578044 HES1Q14469 280 aa11.45□□□□□ -0.58
SMARCE1-213ENST00000578044 ATAD3CQ5T2N8 411 aa11.45□□□□□ -0.58
SMARCE1-213ENST00000578044 TEX38Q6PEX7 206 aa11.45□□□□□ -0.58
SMARCE1-213ENST00000578044 SLC35E3Q7Z769 313 aa11.45□□□□□ -0.58
SMARCE1-213ENST00000578044 CYGBQ8WWM9 190 aa11.45□□□□□ -0.58
SMARCE1-213ENST00000578044 PHYHIPQ92561 330 aa11.45□□□□□ -0.58
SMARCE1-213ENST00000578044 LEAP2Q969E1 77 aa11.45□□□□□ -0.58
SMARCE1-213ENST00000578044 Q96M66 194 aa11.45□□□□□ -0.58
SMARCE1-213ENST00000578044 OR14A2Q96R54 314 aa11.45□□□□□ -0.58
SMARCE1-213ENST00000578044 PLSCR3Q9NRY6 295 aa11.45□□□□□ -0.58
SMARCE1-213ENST00000578044 ZNF581Q9P0T4 197 aa11.45□□□□□ -0.58
SMARCE1-213ENST00000578044 SERPINE3A8MV23 424 aa11.44□□□□□ -0.58
SMARCE1-213ENST00000578044 C12orf77C9JDV5 145 aa11.44□□□□□ -0.58
SMARCE1-213ENST00000578044 MOSP00540 346 aa11.44□□□□□ -0.58
SMARCE1-213ENST00000578044 IGLL1P15814 213 aa11.44□□□□□ -0.58
SMARCE1-213ENST00000578044 HTD2P86397 168 aa11.44□□□□□ -0.58
SMARCE1-213ENST00000578044 DIAPH2-AS1Q14236 149 aa11.44□□□□□ -0.58
SMARCE1-213ENST00000578044 SYT6Q5T7P8 510 aaPredicted RBP11.44□□□□□ -0.58
SMARCE1-213ENST00000578044 OGFRL1Q5TC84 451 aaPredicted RBP11.44□□□□□ -0.58
SMARCE1-213ENST00000578044 RAB12Q6IQ22 244 aa11.44□□□□□ -0.58
SMARCE1-213ENST00000578044 GLIPR1L1Q6UWM5 242 aa11.44□□□□□ -0.58
SMARCE1-213ENST00000578044 UNQ9370/PRO34162Q6UXP9 181 aa11.44□□□□□ -0.58
SMARCE1-213ENST00000578044 OR2W3Q7Z3T1 314 aa11.44□□□□□ -0.58
SMARCE1-213ENST00000578044 STPG2Q8N412 459 aa11.44□□□□□ -0.58
SMARCE1-213ENST00000578044 NANOGP1Q8N7R0 232 aa11.44□□□□□ -0.58
SMARCE1-213ENST00000578044 OR13C5Q8NGS8 318 aa11.44□□□□□ -0.58
SMARCE1-213ENST00000578044 P2RX4Q99571 388 aa11.44□□□□□ -0.58
SMARCE1-213ENST00000578044 CST11Q9H112 138 aa11.44□□□□□ -0.58
SMARCE1-213ENST00000578044 A0A1W2PP11 408 aa11.43□□□□□ -0.58
SMARCE1-213ENST00000578044 A0A1W2PRX2 142 aa11.43□□□□□ -0.58
SMARCE1-213ENST00000578044 MAGEA13PA6NCF6 341 aa11.43□□□□□ -0.58
SMARCE1-213ENST00000578044 H0YHG0 523 aa11.43□□□□□ -0.58
SMARCE1-213ENST00000578044 RRP9O43818 475 aaKnown RBP11.43□□□□□ -0.58
SMARCE1-213ENST00000578044 IGF1P05019 195 aa11.43□□□□□ -0.58
SMARCE1-213ENST00000578044 ELANEP08246 267 aa11.43□□□□□ -0.58
SMARCE1-213ENST00000578044 MGMTP16455 207 aa11.43□□□□□ -0.58
SMARCE1-213ENST00000578044 CELP19835 753 aa11.43□□□□□ -0.58
SMARCE1-213ENST00000578044 VHLP40337 213 aa11.43□□□□□ -0.58
SMARCE1-213ENST00000578044 RANBP1P43487 201 aa11.43□□□□□ -0.58
SMARCE1-213ENST00000578044 GNG10P50151 68 aa11.43□□□□□ -0.58
SMARCE1-213ENST00000578044 FOXE3Q13461 319 aa11.43□□□□□ -0.58
SMARCE1-213ENST00000578044 PNLIPRP3Q17RR3 467 aa11.43□□□□□ -0.58
SMARCE1-213ENST00000578044 C9orf152Q5JTZ5 239 aa11.43□□□□□ -0.58
SMARCE1-213ENST00000578044 AWAT2Q6E213 333 aa11.43□□□□□ -0.58
SMARCE1-213ENST00000578044 LAIR2Q6ISS4 152 aa11.43□□□□□ -0.58
SMARCE1-213ENST00000578044 ETV3LQ6ZN32 361 aa11.43□□□□□ -0.58
SMARCE1-213ENST00000578044 MRPL41Q8IXM3 137 aaKnown RBP11.43□□□□□ -0.58
SMARCE1-213ENST00000578044 JAGN1Q8N5M9 183 aa11.43□□□□□ -0.58
SMARCE1-213ENST00000578044 FAM71E2Q8N5Q1 922 aa11.43□□□□□ -0.58
SMARCE1-213ENST00000578044 Q8N9W7 124 aa11.43□□□□□ -0.58
SMARCE1-213ENST00000578044 NEK7Q8TDX7 302 aa11.43□□□□□ -0.58
SMARCE1-213ENST00000578044 DPF1Q92782 380 aa11.43□□□□□ -0.58
SMARCE1-213ENST00000578044 MUL1Q969V5 352 aa11.43□□□□□ -0.58
SMARCE1-213ENST00000578044 GHITMQ9H3K2 345 aa11.43□□□□□ -0.58
SMARCE1-213ENST00000578044 ETAA1Q9NY74 926 aa11.43□□□□□ -0.58
SMARCE1-213ENST00000578044 JPT1Q9UK76 154 aa11.43□□□□□ -0.58
SMARCE1-213ENST00000578044 TRAPPC2LQ9UL33 140 aa11.43□□□□□ -0.58
SMARCE1-213ENST00000578044 ERGIC3Q9Y282 383 aa11.43□□□□□ -0.58
SMARCE1-213ENST00000578044 PEX16Q9Y5Y5 336 aa11.43□□□□□ -0.58
SMARCE1-213ENST00000578044 TENM3Q9P273 2699 aa11.43□□□□□ -0.58
SMARCE1-213ENST00000578044 SORL1Q92673 2214 aa11.43□□□□□ -0.58
SMARCE1-213ENST00000578044 MYL12BO14950 172 aa11.42□□□□□ -0.58
SMARCE1-213ENST00000578044 PDCD6O75340 191 aa11.42□□□□□ -0.58
SMARCE1-213ENST00000578044 HBZP02008 142 aa11.42□□□□□ -0.58
SMARCE1-213ENST00000578044 OR5H8P0DN80 308 aa11.42□□□□□ -0.58
SMARCE1-213ENST00000578044 GPR12P47775 334 aa11.42□□□□□ -0.58
SMARCE1-213ENST00000578044 CDX1P47902 265 aaPredicted RBP11.42□□□□□ -0.58
SMARCE1-213ENST00000578044 LRRC36Q1X8D7 754 aa11.42□□□□□ -0.58
SMARCE1-213ENST00000578044 CT45A1Q5HYN5 189 aa11.42□□□□□ -0.58
SMARCE1-213ENST00000578044 C1orf100Q5SVJ3 147 aa11.42□□□□□ -0.58
SMARCE1-213ENST00000578044 C6orf141Q5SZD1 244 aa11.42□□□□□ -0.58
SMARCE1-213ENST00000578044 SIGIRRQ6IA17 410 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms