RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 PSG11Q9UQ72 335 aa15.58■□□□□ 0.08
SS18-208ENST00000577751 TMEM272A0A1B0GTI8 110 aa15.57■□□□□ 0.08
SS18-208ENST00000577751 A0A1B0GUS0 222 aa15.57■□□□□ 0.08
SS18-208ENST00000577751 TRIM64CA6NLI5 447 aa15.57■□□□□ 0.08
SS18-208ENST00000577751 POM121CA8CG34 1229 aa15.57■□□□□ 0.08
SS18-208ENST00000577751 C12orf77C9JDV5 145 aa15.57■□□□□ 0.08
SS18-208ENST00000577751 TSPAN9O75954 239 aa15.57■□□□□ 0.08
SS18-208ENST00000577751 CD36P16671 472 aa15.57■□□□□ 0.08
SS18-208ENST00000577751 JUNBP17275 347 aaPredicted RBP15.57■□□□□ 0.08
SS18-208ENST00000577751 LY6EQ16553 131 aa15.57■□□□□ 0.08
SS18-208ENST00000577751 PLA1AQ53H76 456 aa15.57■□□□□ 0.08
SS18-208ENST00000577751 C6orf183Q5T699 404 aa15.57■□□□□ 0.08
SS18-208ENST00000577751 TRAT1Q6PIZ9 186 aa15.57■□□□□ 0.08
SS18-208ENST00000577751 LIAT1Q6ZQX7 453 aa15.57■□□□□ 0.08
SS18-208ENST00000577751 ZNF554Q86TJ5 538 aa15.57■□□□□ 0.08
SS18-208ENST00000577751 PLEKHJ1Q9NW61 149 aa15.57■□□□□ 0.08
SS18-208ENST00000577751 GFOD1Q9NXC2 390 aa15.57■□□□□ 0.08
SS18-208ENST00000577751 HSF4Q9ULV5 492 aa15.57■□□□□ 0.08
SS18-208ENST00000577751 TCF19Q9Y242 345 aa15.57■□□□□ 0.08
SS18-208ENST00000577751 IGHV3-7P01780 117 aa15.56■□□□□ 0.08
SS18-208ENST00000577751 GADD45AP24522 165 aa15.56■□□□□ 0.08
SS18-208ENST00000577751 CEACAM3P40198 252 aa15.56■□□□□ 0.08
SS18-208ENST00000577751 PLA2G7Q13093 441 aa15.56■□□□□ 0.08
SS18-208ENST00000577751 TPTE2P1Q5T6R2 138 aa15.56■□□□□ 0.08
SS18-208ENST00000577751 DHRS7BQ6IAN0 325 aaPredicted RBP15.56■□□□□ 0.08
SS18-208ENST00000577751 CCBE1Q6UXH8 406 aaPredicted RBP15.56■□□□□ 0.08
SS18-208ENST00000577751 Q6ZSV7 163 aa15.56■□□□□ 0.08
SS18-208ENST00000577751 UBALD1Q8TB05 177 aa15.56■□□□□ 0.08
SS18-208ENST00000577751 CHCHD6Q9BRQ6 235 aa15.56■□□□□ 0.08
SS18-208ENST00000577751 ZNF747Q9BV97 191 aa15.56■□□□□ 0.08
SS18-208ENST00000577751 LIN7BQ9HAP6 207 aa15.56■□□□□ 0.08
SS18-208ENST00000577751 BEX1Q9HBH7 125 aa15.56■□□□□ 0.08
SS18-208ENST00000577751 TAF9BQ9HBM6 251 aa15.56■□□□□ 0.08
SS18-208ENST00000577751 RAB9BQ9NP90 201 aa15.56■□□□□ 0.08
SS18-208ENST00000577751 ABCB10Q9NRK6 738 aa15.56■□□□□ 0.08
SS18-208ENST00000577751 RAB22AQ9UL26 194 aa15.56■□□□□ 0.08
SS18-208ENST00000577751 A6NDX4 124 aa15.55■□□□□ 0.08
SS18-208ENST00000577751 NOTOA8MTQ0 251 aa15.55■□□□□ 0.08
SS18-208ENST00000577751 OOSP1A8MZH6 123 aa15.55■□□□□ 0.08
SS18-208ENST00000577751 SDCBPO00560 298 aaPredicted RBP15.55■□□□□ 0.08
SS18-208ENST00000577751 SPINT2O43291 252 aa15.55■□□□□ 0.08
SS18-208ENST00000577751 NAPSAO96009 420 aa15.55■□□□□ 0.08
SS18-208ENST00000577751 HBZP02008 142 aa15.55■□□□□ 0.08
SS18-208ENST00000577751 VEGFCP49767 419 aa15.55■□□□□ 0.08
SS18-208ENST00000577751 TMEM30BQ3MIR4 351 aa15.55■□□□□ 0.08
SS18-208ENST00000577751 Q3ZCU0 254 aa15.55■□□□□ 0.08
SS18-208ENST00000577751 ZNF880Q6PDB4 577 aa15.55■□□□□ 0.08
SS18-208ENST00000577751 C8orf31Q8N9H6 132 aa15.55■□□□□ 0.08
SS18-208ENST00000577751 LINC01006Q8NI28 216 aa15.55■□□□□ 0.08
SS18-208ENST00000577751 KCTD7Q96MP8 289 aa15.55■□□□□ 0.08
SS18-208ENST00000577751 C16orf95Q9H693 158 aa15.55■□□□□ 0.08
SS18-208ENST00000577751 RAB18Q9NP72 206 aa15.55■□□□□ 0.08
SS18-208ENST00000577751 AMMECR1Q9Y4X0 333 aaPredicted RBP15.55■□□□□ 0.08
SS18-208ENST00000577751 ANK2Q01484 3957 aa15.54■□□□□ 0.08
SS18-208ENST00000577751 CLPSL1A2RUU4 121 aa15.54■□□□□ 0.08
SS18-208ENST00000577751 SMIM30A4D0T7 59 aa15.54■□□□□ 0.08
SS18-208ENST00000577751 CHST1O43916 411 aa15.54■□□□□ 0.08
SS18-208ENST00000577751 RAB6AP20340 208 aa15.54■□□□□ 0.08
SS18-208ENST00000577751 GNG10P50151 68 aa15.54■□□□□ 0.08
SS18-208ENST00000577751 EFNB2P52799 333 aa15.54■□□□□ 0.08
SS18-208ENST00000577751 FAM53AQ6NSI3 398 aaPredicted RBP15.54■□□□□ 0.08
SS18-208ENST00000577751 Q6ZPA2 131 aa15.54■□□□□ 0.08
SS18-208ENST00000577751 LINC00311Q8N616 119 aa15.54■□□□□ 0.08
SS18-208ENST00000577751 OR56B1Q8NGI3 324 aa15.54■□□□□ 0.08
SS18-208ENST00000577751 OR1L1Q8NH94 360 aa15.54■□□□□ 0.08
SS18-208ENST00000577751 PTX4Q96A99 478 aa15.54■□□□□ 0.08
SS18-208ENST00000577751 RNF167Q9H6Y7 350 aa15.54■□□□□ 0.08
SS18-208ENST00000577751 PITPNC1Q9UKF7 332 aa15.54■□□□□ 0.08
SS18-208ENST00000577751 TRBV6-6A0A0A6YYG2 114 aa15.53■□□□□ 0.08
SS18-208ENST00000577751 IGHV3-43A0A0B4J1X8 118 aa15.53■□□□□ 0.08
SS18-208ENST00000577751 IGHV3-43DP0DP04 118 aa15.53■□□□□ 0.08
SS18-208ENST00000577751 SLC2A2P11168 524 aaPredicted RBP15.53■□□□□ 0.08
SS18-208ENST00000577751 SDC2P34741 201 aa15.53■□□□□ 0.08
SS18-208ENST00000577751 PLAC9Q5JTB6 97 aa15.53■□□□□ 0.08
SS18-208ENST00000577751 OLFML2AQ68BL7 652 aa15.53■□□□□ 0.08
SS18-208ENST00000577751 Q6ZTK2 550 aa15.53■□□□□ 0.08
SS18-208ENST00000577751 YIPF6Q96EC8 236 aa15.53■□□□□ 0.08
SS18-208ENST00000577751 ARHGAP5-AS1Q96IT6 56 aa15.53■□□□□ 0.08
SS18-208ENST00000577751 CENPOQ9BU64 300 aa15.53■□□□□ 0.08
SS18-208ENST00000577751 RIMS4Q9H426 269 aaPredicted RBP15.53■□□□□ 0.08
SS18-208ENST00000577751 VCX3AQ9NNX9 186 aa15.53■□□□□ 0.08
SS18-208ENST00000577751 KCNIP1Q9NZI2 227 aa15.53■□□□□ 0.08
SS18-208ENST00000577751 AK3Q9UIJ7 227 aa15.53■□□□□ 0.08
SS18-208ENST00000577751 A0A0B4J203 849 aa15.52■□□□□ 0.08
SS18-208ENST00000577751 LOC100506127A0A0U1RQW1 187 aa15.52■□□□□ 0.08
SS18-208ENST00000577751 A0A1W2PPE3 182 aa15.52■□□□□ 0.08
SS18-208ENST00000577751 BRS3P32247 399 aa15.52■□□□□ 0.08
SS18-208ENST00000577751 HTD2P86397 168 aa15.52■□□□□ 0.08
SS18-208ENST00000577751 MADCAM1Q13477 382 aa15.52■□□□□ 0.08
SS18-208ENST00000577751 HMGN3Q15651 99 aa15.52■□□□□ 0.08
SS18-208ENST00000577751 CCDC144NLQ6NUI1 221 aa15.52■□□□□ 0.08
SS18-208ENST00000577751 C5orf24Q7Z6I8 188 aa15.52■□□□□ 0.08
SS18-208ENST00000577751 PRR18Q8N4B5 295 aa15.52■□□□□ 0.08
SS18-208ENST00000577751 ZNF439Q8NDP4 499 aa15.52■□□□□ 0.08
SS18-208ENST00000577751 OCSTAMPQ9BR26 566 aa15.52■□□□□ 0.08
SS18-208ENST00000577751 PECRQ9BY49 303 aa15.52■□□□□ 0.08
SS18-208ENST00000577751 RANBP3Q9H6Z4 567 aaPredicted RBP15.52■□□□□ 0.08
SS18-208ENST00000577751 RAB27BO00194 218 aa15.51■□□□□ 0.07
SS18-208ENST00000577751 KIR2DS4P43632 304 aa15.51■□□□□ 0.07
SS18-208ENST00000577751 ARHGDIBP52566 201 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms