RNA–Protein interactions for RNA: ENST00000575513.1

CIITA-210, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-210ENST00000575513 OR10K2Q6IF99 312 aa10.96□□□□□ -0.65
CIITA-210ENST00000575513 SHISA2Q6UWI4 295 aa10.96□□□□□ -0.65
CIITA-210ENST00000575513 BAIAP2L2Q6UXY1 529 aa10.96□□□□□ -0.65
CIITA-210ENST00000575513 NR2C2APQ86WQ0 139 aa10.96□□□□□ -0.65
CIITA-210ENST00000575513 C8orf31Q8N9H6 132 aa10.96□□□□□ -0.65
CIITA-210ENST00000575513 OR51D1Q8NGF3 324 aa10.96□□□□□ -0.65
CIITA-210ENST00000575513 ARL11Q969Q4 196 aa10.96□□□□□ -0.65
CIITA-210ENST00000575513 MMP28Q9H239 520 aa10.96□□□□□ -0.65
CIITA-210ENST00000575513 TRAPPC2LQ9UL33 140 aa10.96□□□□□ -0.65
CIITA-210ENST00000575513 AMMECR1Q9Y4X0 333 aaPredicted RBP10.96□□□□□ -0.65
CIITA-210ENST00000575513 SPINT2O43291 252 aa10.95□□□□□ -0.66
CIITA-210ENST00000575513 NFYBP25208 207 aa10.95□□□□□ -0.66
CIITA-210ENST00000575513 BRS3P32247 399 aa10.95□□□□□ -0.66
CIITA-210ENST00000575513 SDC2P34741 201 aa10.95□□□□□ -0.66
CIITA-210ENST00000575513 SSTR5P35346 364 aa10.95□□□□□ -0.66
CIITA-210ENST00000575513 C2orf76Q3KRA6 126 aa10.95□□□□□ -0.66
CIITA-210ENST00000575513 HES5Q5TA89 166 aa10.95□□□□□ -0.66
CIITA-210ENST00000575513 CCDC144NLQ6NUI1 221 aa10.95□□□□□ -0.66
CIITA-210ENST00000575513 Q6ZSV7 163 aa10.95□□□□□ -0.66
CIITA-210ENST00000575513 LINC01006Q8NI28 216 aa10.95□□□□□ -0.66
CIITA-210ENST00000575513 RFESDQ8TAC1 157 aa10.95□□□□□ -0.66
CIITA-210ENST00000575513 FUNDC2Q9BWH2 189 aa10.95□□□□□ -0.66
CIITA-210ENST00000575513 LPAR5Q9H1C0 372 aa10.95□□□□□ -0.66
CIITA-210ENST00000575513 RIMS4Q9H426 269 aaPredicted RBP10.95□□□□□ -0.66
CIITA-210ENST00000575513 RNF167Q9H6Y7 350 aa10.95□□□□□ -0.66
CIITA-210ENST00000575513 RANBP3Q9H6Z4 567 aaPredicted RBP10.95□□□□□ -0.66
CIITA-210ENST00000575513 MBNL3Q9NUK0 354 aaKnown RBP10.95□□□□□ -0.66
CIITA-210ENST00000575513 HSF4Q9ULV5 492 aa10.95□□□□□ -0.66
CIITA-210ENST00000575513 PSG11Q9UQ72 335 aa10.95□□□□□ -0.66
CIITA-210ENST00000575513 TCF19Q9Y242 345 aa10.95□□□□□ -0.66
CIITA-210ENST00000575513 HILPDAQ9Y5L2 63 aa10.95□□□□□ -0.66
CIITA-210ENST00000575513 A6NDX4 124 aa10.94□□□□□ -0.66
CIITA-210ENST00000575513 HAX1O00165 279 aa10.94□□□□□ -0.66
CIITA-210ENST00000575513 TMEM127O75204 238 aa10.94□□□□□ -0.66
CIITA-210ENST00000575513 PAX6P26367 422 aa10.94□□□□□ -0.66
CIITA-210ENST00000575513 KIR2DS4P43632 304 aa10.94□□□□□ -0.66
CIITA-210ENST00000575513 CLDN12P56749 244 aa10.94□□□□□ -0.66
CIITA-210ENST00000575513 LOXL3P58215 753 aa10.94□□□□□ -0.66
CIITA-210ENST00000575513 STEAP3Q658P3 488 aa10.94□□□□□ -0.66
CIITA-210ENST00000575513 ANKRD13BQ86YJ7 626 aa10.94□□□□□ -0.66
CIITA-210ENST00000575513 LINC00311Q8N616 119 aa10.94□□□□□ -0.66
CIITA-210ENST00000575513 CCDC107Q8WV48 283 aa10.94□□□□□ -0.66
CIITA-210ENST00000575513 PLEKHJ1Q9NW61 149 aa10.94□□□□□ -0.66
CIITA-210ENST00000575513 KCNIP1Q9NZI2 227 aa10.94□□□□□ -0.66
CIITA-210ENST00000575513 RAB22AQ9UL26 194 aa10.94□□□□□ -0.66
CIITA-210ENST00000575513 TRAV39A0A0B4J263 110 aa10.93□□□□□ -0.66
CIITA-210ENST00000575513 TMEM272A0A1B0GTI8 110 aa10.93□□□□□ -0.66
CIITA-210ENST00000575513 UBE2QL1A1L167 161 aa10.93□□□□□ -0.66
CIITA-210ENST00000575513 C12orf77C9JDV5 145 aa10.93□□□□□ -0.66
CIITA-210ENST00000575513 SDCBPO00560 298 aaPredicted RBP10.93□□□□□ -0.66
CIITA-210ENST00000575513 CLEC2LP0C7M8 214 aa10.93□□□□□ -0.66
CIITA-210ENST00000575513 RAB6AP20340 208 aa10.93□□□□□ -0.66
CIITA-210ENST00000575513 BLVRBP30043 206 aaPredicted RBP10.93□□□□□ -0.66
CIITA-210ENST00000575513 MNDAP41218 407 aa10.93□□□□□ -0.66
CIITA-210ENST00000575513 RPL5P46777 297 aaKnown RBP10.93□□□□□ -0.66
CIITA-210ENST00000575513 RAB13P51153 203 aa10.93□□□□□ -0.66
CIITA-210ENST00000575513 MADCAM1Q13477 382 aa10.93□□□□□ -0.66
CIITA-210ENST00000575513 LY6EQ16553 131 aa10.93□□□□□ -0.66
CIITA-210ENST00000575513 NKAPLQ5M9Q1 402 aa10.93□□□□□ -0.66
CIITA-210ENST00000575513 TPTE2P1Q5T6R2 138 aa10.93□□□□□ -0.66
CIITA-210ENST00000575513 SFXN4Q6P4A7 337 aa10.93□□□□□ -0.66
CIITA-210ENST00000575513 C11orf88Q6PI97 169 aa10.93□□□□□ -0.66
CIITA-210ENST00000575513 GPR141Q7Z602 305 aa10.93□□□□□ -0.66
CIITA-210ENST00000575513 OR4K15Q8NH41 348 aa10.93□□□□□ -0.66
CIITA-210ENST00000575513 SGMS2Q8NHU3 365 aa10.93□□□□□ -0.66
CIITA-210ENST00000575513 MRPL30Q8TCC3 161 aaKnown RBP10.93□□□□□ -0.66
CIITA-210ENST00000575513 TAF15Q92804 592 aaKnown RBP eCLIP10.93□□□□□ -0.66
CIITA-210ENST00000575513 PTX4Q96A99 478 aa10.93□□□□□ -0.66
CIITA-210ENST00000575513 SULT4A1Q9BR01 284 aa10.93□□□□□ -0.66
CIITA-210ENST00000575513 NICN1Q9BSH3 213 aa10.93□□□□□ -0.66
CIITA-210ENST00000575513 NPFFR1Q9GZQ6 430 aa10.93□□□□□ -0.66
CIITA-210ENST00000575513 KCNK15Q9H427 330 aa10.93□□□□□ -0.66
CIITA-210ENST00000575513 LIN7BQ9HAP6 207 aa10.93□□□□□ -0.66
CIITA-210ENST00000575513 GFOD1Q9NXC2 390 aa10.93□□□□□ -0.66
CIITA-210ENST00000575513 RNF114Q9Y508 228 aa10.93□□□□□ -0.66
CIITA-210ENST00000575513 A0A0A6YYD4 124 aa10.92□□□□□ -0.66
CIITA-210ENST00000575513 TRBV6-6A0A0A6YYG2 114 aa10.92□□□□□ -0.66
CIITA-210ENST00000575513 FAM172BPA6NC97 362 aa10.92□□□□□ -0.66
CIITA-210ENST00000575513 FOXI3A8MTJ6 420 aaPredicted RBP10.92□□□□□ -0.66
CIITA-210ENST00000575513 GABARAPO95166 117 aa10.92□□□□□ -0.66
CIITA-210ENST00000575513 NAPSAO96009 420 aa10.92□□□□□ -0.66
CIITA-210ENST00000575513 HBZP02008 142 aa10.92□□□□□ -0.66
CIITA-210ENST00000575513 RCC1P18754 421 aaPredicted RBP10.92□□□□□ -0.66
CIITA-210ENST00000575513 RAB7AP51149 207 aa10.92□□□□□ -0.66
CIITA-210ENST00000575513 SCAND1P57086 179 aa10.92□□□□□ -0.66
CIITA-210ENST00000575513 HTD2P86397 168 aa10.92□□□□□ -0.66
CIITA-210ENST00000575513 LY6G6FQ5SQ64 297 aa10.92□□□□□ -0.66
CIITA-210ENST00000575513 UTF1Q5T230 341 aa10.92□□□□□ -0.66
CIITA-210ENST00000575513 CCBE1Q6UXH8 406 aaPredicted RBP10.92□□□□□ -0.66
CIITA-210ENST00000575513 C16orf82Q7Z2V1 217 aa10.92□□□□□ -0.66
CIITA-210ENST00000575513 C6orf201Q7Z4U5 140 aa10.92□□□□□ -0.66
CIITA-210ENST00000575513 THNSL2Q86YJ6 484 aa10.92□□□□□ -0.66
CIITA-210ENST00000575513 CROCCP3Q8IVE0 287 aa10.92□□□□□ -0.66
CIITA-210ENST00000575513 OR56B1Q8NGI3 324 aa10.92□□□□□ -0.66
CIITA-210ENST00000575513 OR4C13Q8NGP0 309 aa10.92□□□□□ -0.66
CIITA-210ENST00000575513 OR10X1Q8NGY0 326 aa10.92□□□□□ -0.66
CIITA-210ENST00000575513 WFDC12Q8WWY7 111 aa10.92□□□□□ -0.66
CIITA-210ENST00000575513 RPEQ96AT9 228 aa10.92□□□□□ -0.66
CIITA-210ENST00000575513 OCSTAMPQ9BR26 566 aa10.92□□□□□ -0.66
CIITA-210ENST00000575513 FAAP24Q9BTP7 215 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms