RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 OR5M8Q8NGP6 311 aa17.19■□□□□ 0.34
SNF8-216ENST00000573795 Q96MT0 163 aa17.19■□□□□ 0.34
SNF8-216ENST00000573795 SLC29A1Q99808 456 aa17.19■□□□□ 0.34
SNF8-216ENST00000573795 TMEM138Q9NPI0 162 aa17.19■□□□□ 0.34
SNF8-216ENST00000573795 SCOCQ9UIL1 159 aa17.19■□□□□ 0.34
SNF8-216ENST00000573795 U3KQK5 164 aa17.19■□□□□ 0.34
SNF8-216ENST00000573795 DYNC1I1O14576 645 aa17.18■□□□□ 0.34
SNF8-216ENST00000573795 IGHG4P01861 327 aa17.18■□□□□ 0.34
SNF8-216ENST00000573795 CD2P06729 351 aa17.18■□□□□ 0.34
SNF8-216ENST00000573795 ELANEP08246 267 aa17.18■□□□□ 0.34
SNF8-216ENST00000573795 ZNF134P52741 427 aa17.18■□□□□ 0.34
SNF8-216ENST00000573795 ZNF137PP52743 207 aa17.18■□□□□ 0.34
SNF8-216ENST00000573795 F2RL1P55085 397 aa17.18■□□□□ 0.34
SNF8-216ENST00000573795 FHL3Q13643 280 aa17.18■□□□□ 0.34
SNF8-216ENST00000573795 MPV17LQ2QL34 196 aa17.18■□□□□ 0.34
SNF8-216ENST00000573795 C9orf66Q5T8R8 295 aa17.18■□□□□ 0.34
SNF8-216ENST00000573795 RPL22L1Q6P5R6 122 aaKnown RBP17.18■□□□□ 0.34
SNF8-216ENST00000573795 OR13C5Q8NGS8 318 aa17.18■□□□□ 0.34
SNF8-216ENST00000573795 FGF20Q9NP95 211 aaPredicted RBP17.18■□□□□ 0.34
SNF8-216ENST00000573795 MAGEA13PA6NCF6 341 aa17.17■□□□□ 0.34
SNF8-216ENST00000573795 C12orf77C9JDV5 145 aa17.17■□□□□ 0.34
SNF8-216ENST00000573795 CSTBP04080 98 aaKnown RBP17.17■□□□□ 0.34
SNF8-216ENST00000573795 ETV1P50549 477 aa17.17■□□□□ 0.34
SNF8-216ENST00000573795 SMN1Q16637 294 aaKnown RBP17.17■□□□□ 0.34
SNF8-216ENST00000573795 Q3ZCU0 254 aa17.17■□□□□ 0.34
SNF8-216ENST00000573795 CCDC58Q4VC31 144 aa17.17■□□□□ 0.34
SNF8-216ENST00000573795 ATAD3CQ5T2N8 411 aa17.17■□□□□ 0.34
SNF8-216ENST00000573795 SLC25A48Q6ZT89 311 aaKnown RBP17.17■□□□□ 0.34
SNF8-216ENST00000573795 CYYR1Q96J86 154 aa17.17■□□□□ 0.34
SNF8-216ENST00000573795 GON7Q9BXV9 100 aa17.17■□□□□ 0.34
SNF8-216ENST00000573795 RCC2Q9P258 522 aaKnown RBP17.17■□□□□ 0.34
SNF8-216ENST00000573795 RPL36Q9Y3U8 105 aaKnown RBP17.17■□□□□ 0.34
SNF8-216ENST00000573795 LOC100130705A0A1B0GUX0 176 aa17.16■□□□□ 0.34
SNF8-216ENST00000573795 AIPO00170 330 aa17.16■□□□□ 0.34
SNF8-216ENST00000573795 IGFBP3P17936 291 aaPredicted RBP17.16■□□□□ 0.34
SNF8-216ENST00000573795 IL3RAP26951 378 aa17.16■□□□□ 0.34
SNF8-216ENST00000573795 PSMB8P28062 276 aa17.16■□□□□ 0.34
SNF8-216ENST00000573795 BDKRB2P30411 391 aa17.16■□□□□ 0.34
SNF8-216ENST00000573795 CT45A1Q5HYN5 189 aa17.16■□□□□ 0.34
SNF8-216ENST00000573795 OR2G6Q5TZ20 316 aa17.16■□□□□ 0.34
SNF8-216ENST00000573795 OR8H1Q8NGG4 311 aa17.16■□□□□ 0.34
SNF8-216ENST00000573795 CT45A3Q8NHU0 189 aa17.16■□□□□ 0.34
SNF8-216ENST00000573795 MYOZ3Q8TDC0 251 aa17.16■□□□□ 0.34
SNF8-216ENST00000573795 C4orf3Q8WVX3 66 aa17.16■□□□□ 0.34
SNF8-216ENST00000573795 RASL11BQ9BPW5 248 aa17.16■□□□□ 0.34
SNF8-216ENST00000573795 ZNF580Q9UK33 172 aa17.16■□□□□ 0.34
SNF8-216ENST00000573795 SEC14L6B5MCN3 397 aa17.15■□□□□ 0.34
SNF8-216ENST00000573795 RRP9O43818 475 aaKnown RBP17.15■□□□□ 0.34
SNF8-216ENST00000573795 WBP4O75554 376 aaKnown RBP17.15■□□□□ 0.34
SNF8-216ENST00000573795 LALBAP00709 142 aa17.15■□□□□ 0.34
SNF8-216ENST00000573795 IGF1P05019 195 aa17.15■□□□□ 0.34
SNF8-216ENST00000573795 ECI1P42126 302 aa17.15■□□□□ 0.34
SNF8-216ENST00000573795 PPP3R1P63098 170 aa17.15■□□□□ 0.34
SNF8-216ENST00000573795 SLC22A6Q4U2R8 563 aa17.15■□□□□ 0.34
SNF8-216ENST00000573795 ZFP1Q6P2D0 407 aa17.15■□□□□ 0.34
SNF8-216ENST00000573795 NEK7Q8TDX7 302 aa17.15■□□□□ 0.34
SNF8-216ENST00000573795 KCTD7Q96MP8 289 aa17.15■□□□□ 0.34
SNF8-216ENST00000573795 ZNF184Q99676 751 aaPredicted RBP17.15■□□□□ 0.34
SNF8-216ENST00000573795 OGG1O15527 345 aa17.14■□□□□ 0.33
SNF8-216ENST00000573795 SOX6P35712 828 aa17.14■□□□□ 0.33
SNF8-216ENST00000573795 KIAA0141Q14154 515 aaPredicted RBP17.14■□□□□ 0.33
SNF8-216ENST00000573795 ASPHD1Q5U4P2 390 aa17.14■□□□□ 0.33
SNF8-216ENST00000573795 GAPTQ8N292 157 aa17.14■□□□□ 0.33
SNF8-216ENST00000573795 OR10V1Q8NGI7 309 aa17.14■□□□□ 0.33
SNF8-216ENST00000573795 SMIM19Q96E16 107 aa17.14■□□□□ 0.33
SNF8-216ENST00000573795 PAK1IP1Q9NWT1 392 aaPredicted RBP17.14■□□□□ 0.33
SNF8-216ENST00000573795 TRBV5-5A0A0J9YX44 114 aa17.13■□□□□ 0.33
SNF8-216ENST00000573795 TXNL1O43396 289 aa17.13■□□□□ 0.33
SNF8-216ENST00000573795 ZNF780AO75290 641 aaPredicted RBP17.13■□□□□ 0.33
SNF8-216ENST00000573795 GTF2F2P13984 249 aa17.13■□□□□ 0.33
SNF8-216ENST00000573795 VDAC1P21796 283 aa17.13■□□□□ 0.33
SNF8-216ENST00000573795 RIPK1Q13546 671 aa17.13■□□□□ 0.33
SNF8-216ENST00000573795 SYT6Q5T7P8 510 aaPredicted RBP17.13■□□□□ 0.33
SNF8-216ENST00000573795 OR4K15Q8NH41 348 aa17.13■□□□□ 0.33
SNF8-216ENST00000573795 OR1L1Q8NH94 360 aa17.13■□□□□ 0.33
SNF8-216ENST00000573795 S100A13Q99584 98 aa17.13■□□□□ 0.33
SNF8-216ENST00000573795 ASCL2Q99929 193 aa17.13■□□□□ 0.33
SNF8-216ENST00000573795 C9orf16Q9BUW7 83 aa17.13■□□□□ 0.33
SNF8-216ENST00000573795 TRAV8-7A0A075B6U6 113 aa17.12■□□□□ 0.33
SNF8-216ENST00000573795 GPX5O75715 221 aa17.12■□□□□ 0.33
SNF8-216ENST00000573795 HBZP02008 142 aa17.12■□□□□ 0.33
SNF8-216ENST00000573795 PPIFP30405 207 aaKnown RBP17.12■□□□□ 0.33
SNF8-216ENST00000573795 RPS11P62280 158 aaKnown RBP eCLIP17.12■□□□□ 0.33
SNF8-216ENST00000573795 LSAMPQ13449 338 aa17.12■□□□□ 0.33
SNF8-216ENST00000573795 OR11H1Q8NG94 326 aa17.12■□□□□ 0.33
SNF8-216ENST00000573795 KLK15Q9H2R5 256 aa17.12■□□□□ 0.33
SNF8-216ENST00000573795 GNB4Q9HAV0 340 aa17.12■□□□□ 0.33
SNF8-216ENST00000573795 GNG12Q9UBI6 72 aa17.12■□□□□ 0.33
SNF8-216ENST00000573795 SLC2A2P11168 524 aaPredicted RBP17.11■□□□□ 0.33
SNF8-216ENST00000573795 RCC1P18754 421 aaPredicted RBP17.11■□□□□ 0.33
SNF8-216ENST00000573795 ADARB1P78563 741 aaKnown RBP17.11■□□□□ 0.33
SNF8-216ENST00000573795 ZNF260Q3ZCT1 412 aa17.11■□□□□ 0.33
SNF8-216ENST00000573795 C5orf24Q7Z6I8 188 aa17.11■□□□□ 0.33
SNF8-216ENST00000573795 STX19Q8N4C7 294 aa17.11■□□□□ 0.33
SNF8-216ENST00000573795 MUL1Q969V5 352 aa17.11■□□□□ 0.33
SNF8-216ENST00000573795 SPACA1Q9HBV2 294 aa17.11■□□□□ 0.33
SNF8-216ENST00000573795 ETAA1Q9NY74 926 aa17.11■□□□□ 0.33
SNF8-216ENST00000573795 ZNF107Q9UII5 783 aaPredicted RBP17.11■□□□□ 0.33
SNF8-216ENST00000573795 TRAPPC2LQ9UL33 140 aa17.11■□□□□ 0.33
SNF8-216ENST00000573795 I3L521 148 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms