RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 TIMM50Q3ZCQ8 353 aa13.97□□□□□ -0.17
USB1-209ENST00000564387 C6orf183Q5T699 404 aa13.97□□□□□ -0.17
USB1-209ENST00000564387 Q6ZPA2 131 aa13.97□□□□□ -0.17
USB1-209ENST00000564387 OR56B1Q8NGI3 324 aa13.97□□□□□ -0.17
USB1-209ENST00000564387 OR4K15Q8NH41 348 aa13.97□□□□□ -0.17
USB1-209ENST00000564387 CREB3L1Q96BA8 519 aa13.97□□□□□ -0.17
USB1-209ENST00000564387 RNF167Q9H6Y7 350 aa13.97□□□□□ -0.17
USB1-209ENST00000564387 C1RLQ9NZP8 487 aa13.97□□□□□ -0.17
USB1-209ENST00000564387 TRAPPC2LQ9UL33 140 aa13.97□□□□□ -0.17
USB1-209ENST00000564387 PSG11Q9UQ72 335 aa13.97□□□□□ -0.17
USB1-209ENST00000564387 NFYBP25208 207 aa13.96□□□□□ -0.17
USB1-209ENST00000564387 EFNB2P52799 333 aa13.96□□□□□ -0.17
USB1-209ENST00000564387 RELBQ01201 579 aa13.96□□□□□ -0.17
USB1-209ENST00000564387 FOXL1Q12952 345 aa13.96□□□□□ -0.17
USB1-209ENST00000564387 FAM189A2Q15884 450 aa13.96□□□□□ -0.17
USB1-209ENST00000564387 PLAC9Q5JTB6 97 aa13.96□□□□□ -0.17
USB1-209ENST00000564387 NKAPLQ5M9Q1 402 aa13.96□□□□□ -0.17
USB1-209ENST00000564387 LINC00311Q8N616 119 aa13.96□□□□□ -0.17
USB1-209ENST00000564387 MMP28Q9H239 520 aa13.96□□□□□ -0.17
USB1-209ENST00000564387 RIMS4Q9H426 269 aaPredicted RBP13.96□□□□□ -0.17
USB1-209ENST00000564387 RAB9BQ9NP90 201 aa13.96□□□□□ -0.17
USB1-209ENST00000564387 TNFRSF19Q9NS68 423 aa13.96□□□□□ -0.17
USB1-209ENST00000564387 PLEKHJ1Q9NW61 149 aa13.96□□□□□ -0.17
USB1-209ENST00000564387 GFOD1Q9NXC2 390 aa13.96□□□□□ -0.17
USB1-209ENST00000564387 MMP24Q9Y5R2 645 aa13.96□□□□□ -0.17
USB1-209ENST00000564387 A0A0B4J203 849 aa13.95□□□□□ -0.18
USB1-209ENST00000564387 LOC100506127A0A0U1RQW1 187 aa13.95□□□□□ -0.18
USB1-209ENST00000564387 FAM172BPA6NC97 362 aa13.95□□□□□ -0.18
USB1-209ENST00000564387 BTBD17A6NE02 478 aa13.95□□□□□ -0.18
USB1-209ENST00000564387 LEUTXA8MZ59 168 aa13.95□□□□□ -0.18
USB1-209ENST00000564387 OOSP1A8MZH6 123 aa13.95□□□□□ -0.18
USB1-209ENST00000564387 RAB27BO00194 218 aa13.95□□□□□ -0.18
USB1-209ENST00000564387 TMEM127O75204 238 aa13.95□□□□□ -0.18
USB1-209ENST00000564387 SLC2A2P11168 524 aaPredicted RBP13.95□□□□□ -0.18
USB1-209ENST00000564387 VEGFCP49767 419 aa13.95□□□□□ -0.18
USB1-209ENST00000564387 SCAND1P57086 179 aa13.95□□□□□ -0.18
USB1-209ENST00000564387 SFXN4Q6P4A7 337 aa13.95□□□□□ -0.18
USB1-209ENST00000564387 PECRQ9BY49 303 aa13.95□□□□□ -0.18
USB1-209ENST00000564387 TAF9BQ9HBM6 251 aa13.95□□□□□ -0.18
USB1-209ENST00000564387 KCNK7Q9Y2U2 307 aa13.95□□□□□ -0.18
USB1-209ENST00000564387 TOR1AO14656 332 aa13.94□□□□□ -0.18
USB1-209ENST00000564387 SPINT2O43291 252 aa13.94□□□□□ -0.18
USB1-209ENST00000564387 HBZP02008 142 aa13.94□□□□□ -0.18
USB1-209ENST00000564387 CEACAM3P40198 252 aa13.94□□□□□ -0.18
USB1-209ENST00000564387 HTD2P86397 168 aa13.94□□□□□ -0.18
USB1-209ENST00000564387 HMGN3Q15651 99 aa13.94□□□□□ -0.18
USB1-209ENST00000564387 AWAT1Q58HT5 328 aa13.94□□□□□ -0.18
USB1-209ENST00000564387 LY6G6FQ5SQ64 297 aa13.94□□□□□ -0.18
USB1-209ENST00000564387 LIAT1Q6ZQX7 453 aa13.94□□□□□ -0.18
USB1-209ENST00000564387 Q6ZTK2 550 aa13.94□□□□□ -0.18
USB1-209ENST00000564387 ZNF439Q8NDP4 499 aa13.94□□□□□ -0.18
USB1-209ENST00000564387 OR13F1Q8NGS4 319 aa13.94□□□□□ -0.18
USB1-209ENST00000564387 NDNFQ8TB73 568 aa13.94□□□□□ -0.18
USB1-209ENST00000564387 ARHGAP5-AS1Q96IT6 56 aa13.94□□□□□ -0.18
USB1-209ENST00000564387 HILPDAQ9Y5L2 63 aa13.94□□□□□ -0.18
USB1-209ENST00000564387 ANK2Q01484 3957 aa13.94□□□□□ -0.18
USB1-209ENST00000564387 SMIM30A4D0T7 59 aa13.93□□□□□ -0.18
USB1-209ENST00000564387 A6NDX4 124 aa13.93□□□□□ -0.18
USB1-209ENST00000564387 SDCBPO00560 298 aaPredicted RBP13.93□□□□□ -0.18
USB1-209ENST00000564387 AIREO43918 545 aa13.93□□□□□ -0.18
USB1-209ENST00000564387 TSPAN9O75954 239 aa13.93□□□□□ -0.18
USB1-209ENST00000564387 CLEC2LP0C7M8 214 aa13.93□□□□□ -0.18
USB1-209ENST00000564387 MOGAT2Q3SYC2 334 aa13.93□□□□□ -0.18
USB1-209ENST00000564387 TPTE2P1Q5T6R2 138 aa13.93□□□□□ -0.18
USB1-209ENST00000564387 STEAP3Q658P3 488 aa13.93□□□□□ -0.18
USB1-209ENST00000564387 MOB1BQ7L9L4 216 aa13.93□□□□□ -0.18
USB1-209ENST00000564387 OR10R2Q8NGX6 335 aa13.93□□□□□ -0.18
USB1-209ENST00000564387 OR1L1Q8NH94 360 aa13.93□□□□□ -0.18
USB1-209ENST00000564387 TAF15Q92804 592 aaKnown RBP eCLIP13.93□□□□□ -0.18
USB1-209ENST00000564387 LEAP2Q969E1 77 aa13.93□□□□□ -0.18
USB1-209ENST00000564387 AK3Q9UIJ7 227 aa13.93□□□□□ -0.18
USB1-209ENST00000564387 DAPK2Q9UIK4 370 aa13.93□□□□□ -0.18
USB1-209ENST00000564387 TCF19Q9Y242 345 aa13.93□□□□□ -0.18
USB1-209ENST00000564387 AMMECR1Q9Y4X0 333 aaPredicted RBP13.93□□□□□ -0.18
USB1-209ENST00000564387 A0A1B0GUS0 222 aa13.92□□□□□ -0.18
USB1-209ENST00000564387 CRYBA1P05813 215 aa13.92□□□□□ -0.18
USB1-209ENST00000564387 RAB13P51153 203 aa13.92□□□□□ -0.18
USB1-209ENST00000564387 LTC4SQ16873 150 aa13.92□□□□□ -0.18
USB1-209ENST00000564387 FAM53AQ6NSI3 398 aaPredicted RBP13.92□□□□□ -0.18
USB1-209ENST00000564387 CCBE1Q6UXH8 406 aaPredicted RBP13.92□□□□□ -0.18
USB1-209ENST00000564387 UBALD1Q8TB05 177 aa13.92□□□□□ -0.18
USB1-209ENST00000564387 ST6GALNAC6Q969X2 333 aa13.92□□□□□ -0.18
USB1-209ENST00000564387 OCSTAMPQ9BR26 566 aa13.92□□□□□ -0.18
USB1-209ENST00000564387 FUNDC2Q9BWH2 189 aa13.92□□□□□ -0.18
USB1-209ENST00000564387 C16orf95Q9H693 158 aa13.92□□□□□ -0.18
USB1-209ENST00000564387 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.92□□□□□ -0.18
USB1-209ENST00000564387 KCNIP1Q9NZI2 227 aa13.92□□□□□ -0.18
USB1-209ENST00000564387 METTL21EPA6NDL7 271 aa13.91□□□□□ -0.18
USB1-209ENST00000564387 FAM90A9PA6NNJ1 464 aa13.91□□□□□ -0.18
USB1-209ENST00000564387 MFNGO00587 321 aa13.91□□□□□ -0.18
USB1-209ENST00000564387 IGHV3-7P01780 117 aa13.91□□□□□ -0.18
USB1-209ENST00000564387 ZNF134P52741 427 aa13.91□□□□□ -0.18
USB1-209ENST00000564387 ZNF137PP52743 207 aa13.91□□□□□ -0.18
USB1-209ENST00000564387 RAG2P55895 527 aa13.91□□□□□ -0.18
USB1-209ENST00000564387 MXD1Q05195 221 aa13.91□□□□□ -0.18
USB1-209ENST00000564387 MADCAM1Q13477 382 aa13.91□□□□□ -0.18
USB1-209ENST00000564387 MORN2Q502X0 79 aa13.91□□□□□ -0.18
USB1-209ENST00000564387 C12orf54Q6X4T0 127 aa13.91□□□□□ -0.18
USB1-209ENST00000564387 Q6ZSV7 163 aa13.91□□□□□ -0.18
USB1-209ENST00000564387 SLC25A48Q6ZT89 311 aaKnown RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms