RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 SVEP1Q4LDE5 3571 aa4.29□□□□□ -1.72
HERPUD1-207ENST00000563781 FAM90A10PA6NDY2 464 aa4.29□□□□□ -1.72
HERPUD1-207ENST00000563781 CCDC160A6NGH7 325 aa4.29□□□□□ -1.72
HERPUD1-207ENST00000563781 NKX6-3A6NJ46 265 aa4.29□□□□□ -1.72
HERPUD1-207ENST00000563781 A8MXK9 166 aa4.29□□□□□ -1.72
HERPUD1-207ENST00000563781 FAM157AC9JC47 383 aa4.29□□□□□ -1.72
HERPUD1-207ENST00000563781 DIRC3C9JPN6 131 aa4.29□□□□□ -1.72
HERPUD1-207ENST00000563781 F5H697 171 aa4.29□□□□□ -1.72
HERPUD1-207ENST00000563781 H7C1Q1 480 aa4.29□□□□□ -1.72
HERPUD1-207ENST00000563781 SIRPB1O00241 398 aa4.29□□□□□ -1.72
HERPUD1-207ENST00000563781 SLC33A1O00400 549 aaPredicted RBP4.29□□□□□ -1.72
HERPUD1-207ENST00000563781 SOCS1O15524 211 aa4.29□□□□□ -1.72
HERPUD1-207ENST00000563781 NDUFA2O43678 99 aa4.29□□□□□ -1.72
HERPUD1-207ENST00000563781 ZNF737O75373 536 aa4.29□□□□□ -1.72
HERPUD1-207ENST00000563781 CRTAPO75718 401 aaPredicted RBP4.29□□□□□ -1.72
HERPUD1-207ENST00000563781 OR2H2O95918 312 aa4.29□□□□□ -1.72
HERPUD1-207ENST00000563781 CHRM2P08172 466 aa4.29□□□□□ -1.72
HERPUD1-207ENST00000563781 GTF2F2P13984 249 aa4.29□□□□□ -1.72
HERPUD1-207ENST00000563781 ARSBP15848 533 aa4.29□□□□□ -1.72
HERPUD1-207ENST00000563781 ZNF182P17025 639 aaPredicted RBP4.29□□□□□ -1.72
HERPUD1-207ENST00000563781 USF1P22415 310 aaPredicted RBP4.29□□□□□ -1.72
HERPUD1-207ENST00000563781 LMO1P25800 156 aa4.29□□□□□ -1.72
HERPUD1-207ENST00000563781 CHATP28329 748 aa4.29□□□□□ -1.72
HERPUD1-207ENST00000563781 MC5RP33032 325 aa4.29□□□□□ -1.72
HERPUD1-207ENST00000563781 GABRA2P47869 451 aa4.29□□□□□ -1.72
HERPUD1-207ENST00000563781 OR3A1P47881 315 aa4.29□□□□□ -1.72
HERPUD1-207ENST00000563781 PITPNBP48739 271 aa4.29□□□□□ -1.72
HERPUD1-207ENST00000563781 RORCP51449 518 aa4.29□□□□□ -1.72
HERPUD1-207ENST00000563781 F2RL1P55085 397 aa4.29□□□□□ -1.72
HERPUD1-207ENST00000563781 TMEM50BP56557 158 aa4.29□□□□□ -1.72
HERPUD1-207ENST00000563781 SEC61A1P61619 476 aaKnown RBP4.29□□□□□ -1.72
HERPUD1-207ENST00000563781 NHLH2Q02577 135 aa4.29□□□□□ -1.72
HERPUD1-207ENST00000563781 COL10A1Q03692 680 aa4.29□□□□□ -1.72
HERPUD1-207ENST00000563781 LOXL1Q08397 574 aaPredicted RBP4.29□□□□□ -1.72
HERPUD1-207ENST00000563781 DYNC1I2Q13409 638 aaKnown RBP4.29□□□□□ -1.72
HERPUD1-207ENST00000563781 GPR176Q14439 515 aa4.29□□□□□ -1.72
HERPUD1-207ENST00000563781 KCNJ8Q15842 424 aa4.29□□□□□ -1.72
HERPUD1-207ENST00000563781 TAF9Q16594 264 aa4.29□□□□□ -1.72
HERPUD1-207ENST00000563781 MPV17LQ2QL34 196 aa4.29□□□□□ -1.72
HERPUD1-207ENST00000563781 MOGAT2Q3SYC2 334 aa4.29□□□□□ -1.72
HERPUD1-207ENST00000563781 SPIN3Q5JUX0 258 aa4.29□□□□□ -1.72
HERPUD1-207ENST00000563781 IDNKQ5T6J7 187 aa4.29□□□□□ -1.72
HERPUD1-207ENST00000563781 WDR25Q64LD2 544 aaPredicted RBP4.29□□□□□ -1.72
HERPUD1-207ENST00000563781 LINC00596Q86U02 117 aa4.29□□□□□ -1.72
HERPUD1-207ENST00000563781 CROCCP3Q8IVE0 287 aa4.29□□□□□ -1.72
HERPUD1-207ENST00000563781 MUC20Q8N307 709 aaPredicted RBP4.29□□□□□ -1.72
HERPUD1-207ENST00000563781 FAM89BQ8N5H3 189 aa4.29□□□□□ -1.72
HERPUD1-207ENST00000563781 SPICQ8N5J4 248 aa4.29□□□□□ -1.72
HERPUD1-207ENST00000563781 ZNRF1Q8ND25 227 aa4.29□□□□□ -1.72
HERPUD1-207ENST00000563781 MAPK1IP1LQ8NDC0 245 aa4.29□□□□□ -1.72
HERPUD1-207ENST00000563781 KCNG3Q8TAE7 436 aa4.29□□□□□ -1.72
HERPUD1-207ENST00000563781 C2CD4CQ8TF44 421 aa4.29□□□□□ -1.72
HERPUD1-207ENST00000563781 PTX4Q96A99 478 aa4.29□□□□□ -1.72
HERPUD1-207ENST00000563781 DGCR14Q96DF8 476 aaKnown RBP4.29□□□□□ -1.72
HERPUD1-207ENST00000563781 MRPS24Q96EL2 167 aaKnown RBP4.29□□□□□ -1.72
HERPUD1-207ENST00000563781 COQ2Q96H96 371 aa4.29□□□□□ -1.72
HERPUD1-207ENST00000563781 S100A13Q99584 98 aa4.29□□□□□ -1.72
HERPUD1-207ENST00000563781 GAL3ST1Q99999 423 aa4.29□□□□□ -1.72
HERPUD1-207ENST00000563781 NICN1Q9BSH3 213 aa4.29□□□□□ -1.72
HERPUD1-207ENST00000563781 DCUN1D5Q9BTE7 237 aa4.29□□□□□ -1.72
HERPUD1-207ENST00000563781 SELENOIQ9C0D9 397 aa4.29□□□□□ -1.72
HERPUD1-207ENST00000563781 SLIRPQ9GZT3 109 aaKnown RBP4.29□□□□□ -1.72
HERPUD1-207ENST00000563781 NXF2Q9GZY0 626 aaKnown RBP4.29□□□□□ -1.72
HERPUD1-207ENST00000563781 SHARPINQ9H0F6 387 aa4.29□□□□□ -1.72
HERPUD1-207ENST00000563781 CST11Q9H112 138 aa4.29□□□□□ -1.72
HERPUD1-207ENST00000563781 MIXL1Q9H2W2 232 aa4.29□□□□□ -1.72
HERPUD1-207ENST00000563781 ZNF665Q9H7R5 613 aa4.29□□□□□ -1.72
HERPUD1-207ENST00000563781 BATF3Q9NR55 127 aa4.29□□□□□ -1.72
HERPUD1-207ENST00000563781 RHBDL2Q9NX52 303 aa4.29□□□□□ -1.72
HERPUD1-207ENST00000563781 ABRACLQ9P1F3 81 aa4.29□□□□□ -1.72
HERPUD1-207ENST00000563781 OR14J1Q9UGF5 321 aa4.29□□□□□ -1.72
HERPUD1-207ENST00000563781 RAB22AQ9UL26 194 aa4.29□□□□□ -1.72
HERPUD1-207ENST00000563781 SPATA2Q9UM82 520 aa4.29□□□□□ -1.72
HERPUD1-207ENST00000563781 ETV7Q9Y603 341 aa4.29□□□□□ -1.72
HERPUD1-207ENST00000563781 DYSFO75923 2080 aa4.28□□□□□ -1.72
HERPUD1-207ENST00000563781 CHD3Q12873 2000 aaKnown RBP4.28□□□□□ -1.72
HERPUD1-207ENST00000563781 A0A075B6Q4 140 aa4.28□□□□□ -1.72
HERPUD1-207ENST00000563781 K7N7A8 449 aa4.28□□□□□ -1.72
HERPUD1-207ENST00000563781 DVL1O14640 695 aa4.28□□□□□ -1.72
HERPUD1-207ENST00000563781 SH2D1BO14796 132 aa4.28□□□□□ -1.72
HERPUD1-207ENST00000563781 DEGS1O15121 323 aa4.28□□□□□ -1.72
HERPUD1-207ENST00000563781 PHF1O43189 567 aaPredicted RBP4.28□□□□□ -1.72
HERPUD1-207ENST00000563781 PDCD6O75340 191 aa4.28□□□□□ -1.72
HERPUD1-207ENST00000563781 OR7C1O76099 320 aaPredicted RBP4.28□□□□□ -1.72
HERPUD1-207ENST00000563781 MBPP02686 304 aaPredicted RBP4.28□□□□□ -1.72
HERPUD1-207ENST00000563781 ZNF44P15621 663 aa4.28□□□□□ -1.72
HERPUD1-207ENST00000563781 GABRR1P24046 479 aa4.28□□□□□ -1.72
HERPUD1-207ENST00000563781 ZFP36P26651 326 aaKnown RBP4.28□□□□□ -1.72
HERPUD1-207ENST00000563781 RANBP1P43487 201 aa4.28□□□□□ -1.72
HERPUD1-207ENST00000563781 VEGFCP49767 419 aa4.28□□□□□ -1.72
HERPUD1-207ENST00000563781 DGCR2P98153 550 aa4.28□□□□□ -1.72
HERPUD1-207ENST00000563781 PAX2Q02962 417 aa4.28□□□□□ -1.72
HERPUD1-207ENST00000563781 KRTAP1-1Q07627 177 aa4.28□□□□□ -1.72
HERPUD1-207ENST00000563781 TMEM249Q2WGJ8 235 aa4.28□□□□□ -1.72
HERPUD1-207ENST00000563781 CXorf66Q5JRM2 361 aaPredicted RBP4.28□□□□□ -1.72
HERPUD1-207ENST00000563781 PLAC9Q5JTB6 97 aa4.28□□□□□ -1.72
HERPUD1-207ENST00000563781 SPNS3Q6ZMD2 512 aa4.28□□□□□ -1.72
HERPUD1-207ENST00000563781 Q6ZPA2 131 aa4.28□□□□□ -1.72
HERPUD1-207ENST00000563781 TCF23Q7RTU1 214 aa4.28□□□□□ -1.72
HERPUD1-207ENST00000563781 ZNF561Q8N587 486 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms