RNA–Protein interactions for RNA: ENST00000561945.1

SPG7-205, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 411 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-205ENST00000561945 SLC25A48Q6ZT89 311 aaKnown RBP11.39□□□□□ -0.59
SPG7-205ENST00000561945 MOB3BQ86TA1 216 aa11.39□□□□□ -0.59
SPG7-205ENST00000561945 SATL1Q86VE3 508 aa11.39□□□□□ -0.59
SPG7-205ENST00000561945 ARL11Q969Q4 196 aa11.39□□□□□ -0.59
SPG7-205ENST00000561945 TMEM106AQ96A25 262 aa11.39□□□□□ -0.59
SPG7-205ENST00000561945 S1PR3Q99500 378 aa11.39□□□□□ -0.59
SPG7-205ENST00000561945 C9orf16Q9BUW7 83 aa11.39□□□□□ -0.59
SPG7-205ENST00000561945 AMBNQ9NP70 447 aa11.39□□□□□ -0.59
SPG7-205ENST00000561945 PAK1IP1Q9NWT1 392 aaPredicted RBP11.39□□□□□ -0.59
SPG7-205ENST00000561945 SCOCQ9UIL1 159 aa11.39□□□□□ -0.59
SPG7-205ENST00000561945 RPL36Q9Y3U8 105 aaKnown RBP11.39□□□□□ -0.59
SPG7-205ENST00000561945 OGG1O15527 345 aa11.38□□□□□ -0.59
SPG7-205ENST00000561945 BAG2O95816 211 aa11.38□□□□□ -0.59
SPG7-205ENST00000561945 REG1BP48304 166 aa11.38□□□□□ -0.59
SPG7-205ENST00000561945 CXorf66Q5JRM2 361 aaPredicted RBP11.38□□□□□ -0.59
SPG7-205ENST00000561945 C9orf66Q5T8R8 295 aa11.38□□□□□ -0.59
SPG7-205ENST00000561945 STEAP3Q658P3 488 aa11.38□□□□□ -0.59
SPG7-205ENST00000561945 OR5M8Q8NGP6 311 aa11.38□□□□□ -0.59
SPG7-205ENST00000561945 C4orf3Q8WVX3 66 aa11.38□□□□□ -0.59
SPG7-205ENST00000561945 DUX3Q96PT4 197 aa11.38□□□□□ -0.59
SPG7-205ENST00000561945 CHCHD6Q9BRQ6 235 aa11.38□□□□□ -0.59
SPG7-205ENST00000561945 FAM192AQ9GZU8 254 aa11.38□□□□□ -0.59
SPG7-205ENST00000561945 SIRT4Q9Y6E7 314 aaPredicted RBP11.38□□□□□ -0.59
SPG7-205ENST00000561945 IGHV3-72A0A0B4J1Y9 119 aa11.37□□□□□ -0.59
SPG7-205ENST00000561945 LOC100130705A0A1B0GUX0 176 aa11.37□□□□□ -0.59
SPG7-205ENST00000561945 NCBP2LA6PVI3 153 aaKnown RBP11.37□□□□□ -0.59
SPG7-205ENST00000561945 RRP9O43818 475 aaKnown RBP11.37□□□□□ -0.59
SPG7-205ENST00000561945 WBP4O75554 376 aaKnown RBP11.37□□□□□ -0.59
SPG7-205ENST00000561945 SC5DO75845 299 aa11.37□□□□□ -0.59
SPG7-205ENST00000561945 CSTBP04080 98 aaKnown RBP11.37□□□□□ -0.59
SPG7-205ENST00000561945 IL3RAP26951 378 aa11.37□□□□□ -0.59
SPG7-205ENST00000561945 BDKRB2P30411 391 aa11.37□□□□□ -0.59
SPG7-205ENST00000561945 SOX2P48431 317 aa11.37□□□□□ -0.59
SPG7-205ENST00000561945 ZNF134P52741 427 aa11.37□□□□□ -0.59
SPG7-205ENST00000561945 DDI2Q5TDH0 399 aa11.37□□□□□ -0.59
SPG7-205ENST00000561945 PQLC1Q8N2U9 271 aa11.37□□□□□ -0.59
SPG7-205ENST00000561945 TFAP2CQ92754 450 aa11.37□□□□□ -0.59
SPG7-205ENST00000561945 MRPS24Q96EL2 167 aaKnown RBP11.37□□□□□ -0.59
SPG7-205ENST00000561945 SLC29A1Q99808 456 aa11.37□□□□□ -0.59
SPG7-205ENST00000561945 HSPB9Q9BQS6 159 aa11.37□□□□□ -0.59
SPG7-205ENST00000561945 SPACA1Q9HBV2 294 aa11.37□□□□□ -0.59
SPG7-205ENST00000561945 ING4Q9UNL4 249 aa11.37□□□□□ -0.59
SPG7-205ENST00000561945 U3KQK5 164 aa11.37□□□□□ -0.59
SPG7-205ENST00000561945 TRBV5-5A0A0J9YX44 114 aa11.36□□□□□ -0.59
SPG7-205ENST00000561945 ZNF736B4DX44 427 aaPredicted RBP11.36□□□□□ -0.59
SPG7-205ENST00000561945 C12orf77C9JDV5 145 aa11.36□□□□□ -0.59
SPG7-205ENST00000561945 GTF2F2P13984 249 aa11.36□□□□□ -0.59
SPG7-205ENST00000561945 SERPINA2P20848 420 aa11.36□□□□□ -0.59
SPG7-205ENST00000561945 DCKP27707 260 aa11.36□□□□□ -0.59
SPG7-205ENST00000561945 PPIFP30405 207 aaKnown RBP11.36□□□□□ -0.59
SPG7-205ENST00000561945 LUMP51884 338 aaPredicted RBP11.36□□□□□ -0.59
SPG7-205ENST00000561945 PPP3R1P63098 170 aa11.36□□□□□ -0.59
SPG7-205ENST00000561945 RUNX1Q01196 453 aa11.36□□□□□ -0.59
SPG7-205ENST00000561945 KIAA0141Q14154 515 aaPredicted RBP11.36□□□□□ -0.59
SPG7-205ENST00000561945 GPR176Q14439 515 aa11.36□□□□□ -0.59
SPG7-205ENST00000561945 DEFB136Q30KP8 78 aa11.36□□□□□ -0.59
SPG7-205ENST00000561945 CT45A1Q5HYN5 189 aa11.36□□□□□ -0.59
SPG7-205ENST00000561945 FAM53AQ6NSI3 398 aaPredicted RBP11.36□□□□□ -0.59
SPG7-205ENST00000561945 LYPD6Q86Y78 171 aa11.36□□□□□ -0.59
SPG7-205ENST00000561945 CT45A3Q8NHU0 189 aa11.36□□□□□ -0.59
SPG7-205ENST00000561945 SMIM19Q96E16 107 aa11.36□□□□□ -0.59
SPG7-205ENST00000561945 RASL11BQ9BPW5 248 aa11.36□□□□□ -0.59
SPG7-205ENST00000561945 A0A1W2PP11 408 aa11.35□□□□□ -0.59
SPG7-205ENST00000561945 AIPO00170 330 aa11.35□□□□□ -0.59
SPG7-205ENST00000561945 SLC31A2O15432 143 aa11.35□□□□□ -0.59
SPG7-205ENST00000561945 CA11O75493 328 aa11.35□□□□□ -0.59
SPG7-205ENST00000561945 OR5H8P0DN80 308 aa11.35□□□□□ -0.59
SPG7-205ENST00000561945 FSTP19883 344 aa11.35□□□□□ -0.59
SPG7-205ENST00000561945 SOX6P35712 828 aa11.35□□□□□ -0.59
SPG7-205ENST00000561945 ETV1P50549 477 aa11.35□□□□□ -0.59
SPG7-205ENST00000561945 F2RL1P55085 397 aa11.35□□□□□ -0.59
SPG7-205ENST00000561945 RPS11P62280 158 aaKnown RBP eCLIP11.35□□□□□ -0.59
SPG7-205ENST00000561945 RIPK1Q13546 671 aa11.35□□□□□ -0.59
SPG7-205ENST00000561945 TRAT1Q6PIZ9 186 aa11.35□□□□□ -0.59
SPG7-205ENST00000561945 LCNL1Q6ZST4 164 aa11.35□□□□□ -0.59
SPG7-205ENST00000561945 ZNF554Q86TJ5 538 aa11.35□□□□□ -0.59
SPG7-205ENST00000561945 CDH26Q8IXH8 852 aa11.35□□□□□ -0.59
SPG7-205ENST00000561945 UBE2E2Q96LR5 201 aa11.35□□□□□ -0.59
SPG7-205ENST00000561945 S100A13Q99584 98 aa11.35□□□□□ -0.59
SPG7-205ENST00000561945 ZNF184Q99676 751 aaPredicted RBP11.35□□□□□ -0.59
SPG7-205ENST00000561945 RAB9BQ9NP90 201 aa11.35□□□□□ -0.59
SPG7-205ENST00000561945 BABAM2Q9NXR7 383 aa11.35□□□□□ -0.59
SPG7-205ENST00000561945 STARD9Q9P2P6 4700 aa11.34□□□□□ -0.59
SPG7-205ENST00000561945 IGHV3-43A0A0B4J1X8 118 aa11.34□□□□□ -0.59
SPG7-205ENST00000561945 FAM90A10PA6NDY2 464 aa11.34□□□□□ -0.59
SPG7-205ENST00000561945 FAM90A7PA6NKC0 464 aa11.34□□□□□ -0.59
SPG7-205ENST00000561945 FAM90A23PA8MXZ1 464 aa11.34□□□□□ -0.59
SPG7-205ENST00000561945 LANCL1O43813 399 aa11.34□□□□□ -0.59
SPG7-205ENST00000561945 LALBAP00709 142 aa11.34□□□□□ -0.59
SPG7-205ENST00000561945 IGLV1-40P01703 118 aa11.34□□□□□ -0.59
SPG7-205ENST00000561945 GLAP06280 429 aa11.34□□□□□ -0.59
SPG7-205ENST00000561945 IGHV3-43DP0DP04 118 aa11.34□□□□□ -0.59
SPG7-205ENST00000561945 VDAC1P21796 283 aa11.34□□□□□ -0.59
SPG7-205ENST00000561945 CHATP28329 748 aa11.34□□□□□ -0.59
SPG7-205ENST00000561945 INSL3P51460 131 aa11.34□□□□□ -0.59
SPG7-205ENST00000561945 LY6G6FQ5SQ64 297 aa11.34□□□□□ -0.59
SPG7-205ENST00000561945 ATAD3CQ5T2N8 411 aa11.34□□□□□ -0.59
SPG7-205ENST00000561945 SYT6Q5T7P8 510 aaPredicted RBP11.34□□□□□ -0.59
SPG7-205ENST00000561945 OR2G6Q5TZ20 316 aa11.34□□□□□ -0.59
SPG7-205ENST00000561945 DMKNQ6E0U4 476 aaPredicted RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms