RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 PLAC9Q5JTB6 97 aa11.19□□□□□ -0.62
TPM1-230ENST00000561266 MINOS1Q5TGZ0 78 aa11.19□□□□□ -0.62
TPM1-230ENST00000561266 Q6ZSV7 163 aa11.19□□□□□ -0.62
TPM1-230ENST00000561266 NDNFQ8TB73 568 aa11.19□□□□□ -0.62
TPM1-230ENST00000561266 MBNL3Q9NUK0 354 aaKnown RBP11.19□□□□□ -0.62
TPM1-230ENST00000561266 TRAPPC2LQ9UL33 140 aa11.19□□□□□ -0.62
TPM1-230ENST00000561266 MINOS1-NBL1R4GNA1 71 aa11.19□□□□□ -0.62
TPM1-230ENST00000561266 A0A087WXM4 84 aa11.18□□□□□ -0.62
TPM1-230ENST00000561266 LOC100506127A0A0U1RQW1 187 aa11.18□□□□□ -0.62
TPM1-230ENST00000561266 A6NDX4 124 aa11.18□□□□□ -0.62
TPM1-230ENST00000561266 J3QR06 171 aa11.18□□□□□ -0.62
TPM1-230ENST00000561266 F2RL2O00254 374 aa11.18□□□□□ -0.62
TPM1-230ENST00000561266 PDCD5O14737 125 aa11.18□□□□□ -0.62
TPM1-230ENST00000561266 ORC5O43913 435 aa11.18□□□□□ -0.62
TPM1-230ENST00000561266 HBZP02008 142 aa11.18□□□□□ -0.62
TPM1-230ENST00000561266 GZMHP20718 246 aa11.18□□□□□ -0.62
TPM1-230ENST00000561266 HTR1DP28221 377 aa11.18□□□□□ -0.62
TPM1-230ENST00000561266 SDC2P34741 201 aa11.18□□□□□ -0.62
TPM1-230ENST00000561266 RBM39Q14498 530 aaKnown RBP11.18□□□□□ -0.62
TPM1-230ENST00000561266 AANATQ16613 207 aa11.18□□□□□ -0.62
TPM1-230ENST00000561266 TMEM219Q86XT9 240 aa11.18□□□□□ -0.62
TPM1-230ENST00000561266 ARHGAP5-AS1Q96IT6 56 aa11.18□□□□□ -0.62
TPM1-230ENST00000561266 NEDD4LQ96PU5 975 aa11.18□□□□□ -0.62
TPM1-230ENST00000561266 GFOD1Q9NXC2 390 aa11.18□□□□□ -0.62
TPM1-230ENST00000561266 DPM3Q9P2X0 92 aa11.18□□□□□ -0.62
TPM1-230ENST00000561266 AK3Q9UIJ7 227 aa11.18□□□□□ -0.62
TPM1-230ENST00000561266 SSR3Q9UNL2 185 aa11.18□□□□□ -0.62
TPM1-230ENST00000561266 KCNK7Q9Y2U2 307 aa11.18□□□□□ -0.62
TPM1-230ENST00000561266 NDUFA7O95182 113 aa11.17□□□□□ -0.62
TPM1-230ENST00000561266 NAPSAO96009 420 aa11.17□□□□□ -0.62
TPM1-230ENST00000561266 ZNF134P52741 427 aa11.17□□□□□ -0.62
TPM1-230ENST00000561266 RAG2P55895 527 aa11.17□□□□□ -0.62
TPM1-230ENST00000561266 MXD1Q05195 221 aa11.17□□□□□ -0.62
TPM1-230ENST00000561266 GNMTQ14749 295 aa11.17□□□□□ -0.62
TPM1-230ENST00000561266 TPTE2P1Q5T6R2 138 aa11.17□□□□□ -0.62
TPM1-230ENST00000561266 ZNF880Q6PDB4 577 aa11.17□□□□□ -0.62
TPM1-230ENST00000561266 Q6ZS46 218 aa11.17□□□□□ -0.62
TPM1-230ENST00000561266 PRR18Q8N4B5 295 aa11.17□□□□□ -0.62
TPM1-230ENST00000561266 ZNF439Q8NDP4 499 aa11.17□□□□□ -0.62
TPM1-230ENST00000561266 OR10V1Q8NGI7 309 aa11.17□□□□□ -0.62
TPM1-230ENST00000561266 OR5R1Q8NH85 324 aa11.17□□□□□ -0.62
TPM1-230ENST00000561266 OR9G1Q8NH87 305 aa11.17□□□□□ -0.62
TPM1-230ENST00000561266 PECRQ9BY49 303 aa11.17□□□□□ -0.62
TPM1-230ENST00000561266 MMP28Q9H239 520 aa11.17□□□□□ -0.62
TPM1-230ENST00000561266 LIN7BQ9HAP6 207 aa11.17□□□□□ -0.62
TPM1-230ENST00000561266 TAF9BQ9HBM6 251 aa11.17□□□□□ -0.62
TPM1-230ENST00000561266 PLEKHJ1Q9NW61 149 aa11.17□□□□□ -0.62
TPM1-230ENST00000561266 ELF5Q9UKW6 265 aaPredicted RBP11.17□□□□□ -0.62
TPM1-230ENST00000561266 SIGLEC9Q9Y336 463 aa11.17□□□□□ -0.62
TPM1-230ENST00000561266 NOTOA8MTQ0 251 aa11.16□□□□□ -0.62
TPM1-230ENST00000561266 SDCBPO00560 298 aaPredicted RBP11.16□□□□□ -0.62
TPM1-230ENST00000561266 TOR1AO14656 332 aa11.16□□□□□ -0.62
TPM1-230ENST00000561266 SNRPBP14678 240 aaKnown RBP11.16□□□□□ -0.62
TPM1-230ENST00000561266 PSMD7P51665 324 aa11.16□□□□□ -0.62
TPM1-230ENST00000561266 FOXL1Q12952 345 aa11.16□□□□□ -0.62
TPM1-230ENST00000561266 GDPGP1Q6ZNW5 385 aa11.16□□□□□ -0.62
TPM1-230ENST00000561266 OR10A7Q8NGE5 316 aa11.16□□□□□ -0.62
TPM1-230ENST00000561266 OR52L2PQ8NGH6 319 aa11.16□□□□□ -0.62
TPM1-230ENST00000561266 LINC01006Q8NI28 216 aa11.16□□□□□ -0.62
TPM1-230ENST00000561266 ZNF596Q8TC21 504 aa11.16□□□□□ -0.62
TPM1-230ENST00000561266 URM1Q9BTM9 101 aaKnown RBP11.16□□□□□ -0.62
TPM1-230ENST00000561266 RAB22AQ9UL26 194 aa11.16□□□□□ -0.62
TPM1-230ENST00000561266 TCF19Q9Y242 345 aa11.16□□□□□ -0.62
TPM1-230ENST00000561266 BTBD17A6NE02 478 aa11.15□□□□□ -0.62
TPM1-230ENST00000561266 LEUTXA8MZ59 168 aa11.15□□□□□ -0.62
TPM1-230ENST00000561266 RAB27BO00194 218 aa11.15□□□□□ -0.62
TPM1-230ENST00000561266 CA11O75493 328 aa11.15□□□□□ -0.62
TPM1-230ENST00000561266 CRYBA1P05813 215 aa11.15□□□□□ -0.62
TPM1-230ENST00000561266 DYNLT3P51808 116 aa11.15□□□□□ -0.62
TPM1-230ENST00000561266 PRRX1P54821 245 aa11.15□□□□□ -0.62
TPM1-230ENST00000561266 LSM3P62310 102 aaKnown RBP11.15□□□□□ -0.62
TPM1-230ENST00000561266 HMGN3Q15651 99 aa11.15□□□□□ -0.62
TPM1-230ENST00000561266 CT45A1Q5HYN5 189 aa11.15□□□□□ -0.62
TPM1-230ENST00000561266 HIST2H2BDQ6DRA6 164 aa11.15□□□□□ -0.62
TPM1-230ENST00000561266 DHRS7BQ6IAN0 325 aaPredicted RBP11.15□□□□□ -0.62
TPM1-230ENST00000561266 Q6ZTK2 550 aa11.15□□□□□ -0.62
TPM1-230ENST00000561266 TPRA1Q86W33 373 aa11.15□□□□□ -0.62
TPM1-230ENST00000561266 OR52M1Q8NGK5 317 aa11.15□□□□□ -0.62
TPM1-230ENST00000561266 OR5H6Q8NGV6 325 aa11.15□□□□□ -0.62
TPM1-230ENST00000561266 CT45A3Q8NHU0 189 aa11.15□□□□□ -0.62
TPM1-230ENST00000561266 KCTD7Q96MP8 289 aa11.15□□□□□ -0.62
TPM1-230ENST00000561266 DAPK2Q9UIK4 370 aa11.15□□□□□ -0.62
TPM1-230ENST00000561266 HSF4Q9ULV5 492 aa11.15□□□□□ -0.62
TPM1-230ENST00000561266 MMP24Q9Y5R2 645 aa11.15□□□□□ -0.62
TPM1-230ENST00000561266 A0A1W2PPI3 338 aa11.14□□□□□ -0.63
TPM1-230ENST00000561266 TSPAN9O75954 239 aa11.14□□□□□ -0.63
TPM1-230ENST00000561266 HABP2Q14520 560 aaPredicted RBP11.14□□□□□ -0.63
TPM1-230ENST00000561266 C6orf183Q5T699 404 aa11.14□□□□□ -0.63
TPM1-230ENST00000561266 SFXN4Q6P4A7 337 aa11.14□□□□□ -0.63
TPM1-230ENST00000561266 LINC00311Q8N616 119 aa11.14□□□□□ -0.63
TPM1-230ENST00000561266 C3orf56Q8N813 242 aa11.14□□□□□ -0.63
TPM1-230ENST00000561266 CFHR4Q92496 578 aa11.14□□□□□ -0.63
TPM1-230ENST00000561266 ST6GALNAC6Q969X2 333 aa11.14□□□□□ -0.63
TPM1-230ENST00000561266 ZNF747Q9BV97 191 aa11.14□□□□□ -0.63
TPM1-230ENST00000561266 NAA50Q9GZZ1 169 aaKnown RBP11.14□□□□□ -0.63
TPM1-230ENST00000561266 PARP12Q9H0J9 701 aaKnown RBP11.14□□□□□ -0.63
TPM1-230ENST00000561266 C16orf95Q9H693 158 aa11.14□□□□□ -0.63
TPM1-230ENST00000561266 TRBV6-6A0A0A6YYG2 114 aa11.13□□□□□ -0.63
TPM1-230ENST00000561266 CLPSL1A2RUU4 121 aa11.13□□□□□ -0.63
TPM1-230ENST00000561266 SPINT2O43291 252 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms