RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 LOXL3P58215 753 aa8.63□□□□□ -1.03
TPM1-227ENST00000560970 QRFPP83859 136 aa8.63□□□□□ -1.03
TPM1-227ENST00000560970 PAX5Q02548 391 aa8.63□□□□□ -1.03
TPM1-227ENST00000560970 GPR176Q14439 515 aa8.63□□□□□ -1.03
TPM1-227ENST00000560970 HABP2Q14520 560 aaPredicted RBP8.63□□□□□ -1.03
TPM1-227ENST00000560970 P2RY14Q15391 338 aa8.63□□□□□ -1.03
TPM1-227ENST00000560970 PLA1AQ53H76 456 aa8.63□□□□□ -1.03
TPM1-227ENST00000560970 OXLD1Q5BKU9 147 aa8.63□□□□□ -1.03
TPM1-227ENST00000560970 C22orf42Q6IC83 251 aa8.63□□□□□ -1.03
TPM1-227ENST00000560970 LHFPL4Q7Z7J7 247 aa8.63□□□□□ -1.03
TPM1-227ENST00000560970 OR6Q1Q8NGQ2 317 aa8.63□□□□□ -1.03
TPM1-227ENST00000560970 PIFOQ8TCI5 191 aa8.63□□□□□ -1.03
TPM1-227ENST00000560970 BORCS5Q969J3 196 aa8.63□□□□□ -1.03
TPM1-227ENST00000560970 R3HDM4Q96D70 268 aa8.63□□□□□ -1.03
TPM1-227ENST00000560970 SELENOIQ9C0D9 397 aa8.63□□□□□ -1.03
TPM1-227ENST00000560970 WDR12Q9GZL7 423 aaKnown RBP8.63□□□□□ -1.03
TPM1-227ENST00000560970 MMP28Q9H239 520 aa8.63□□□□□ -1.03
TPM1-227ENST00000560970 PALMDQ9NP74 551 aa8.63□□□□□ -1.03
TPM1-227ENST00000560970 ABCB10Q9NRK6 738 aa8.63□□□□□ -1.03
TPM1-227ENST00000560970 PITPNC1Q9UKF7 332 aa8.63□□□□□ -1.03
TPM1-227ENST00000560970 SESN1Q9Y6P5 492 aa8.63□□□□□ -1.03
TPM1-227ENST00000560970 NOTCH3Q9UM47 2321 aa8.62□□□□□ -1.03
TPM1-227ENST00000560970 A0A075B6Q4 140 aa8.62□□□□□ -1.03
TPM1-227ENST00000560970 MEIKINA0A087WXM9 373 aa8.62□□□□□ -1.03
TPM1-227ENST00000560970 TRGV10A0A0A0MS01 117 aa8.62□□□□□ -1.03
TPM1-227ENST00000560970 IGHV2-26A0A0B4J1V2 119 aa8.62□□□□□ -1.03
TPM1-227ENST00000560970 FUOMA2VDF0 154 aa8.62□□□□□ -1.03
TPM1-227ENST00000560970 SMIM30A4D0T7 59 aa8.62□□□□□ -1.03
TPM1-227ENST00000560970 ADARB2-AS1A8MUL3 147 aa8.62□□□□□ -1.03
TPM1-227ENST00000560970 TMEM14DPA8MWL7 114 aa8.62□□□□□ -1.03
TPM1-227ENST00000560970 PEX14O75381 377 aa8.62□□□□□ -1.03
TPM1-227ENST00000560970 ARG1P05089 322 aa8.62□□□□□ -1.03
TPM1-227ENST00000560970 CGB3P0DN86 165 aa8.62□□□□□ -1.03
TPM1-227ENST00000560970 CGB7P0DN87 165 aa8.62□□□□□ -1.03
TPM1-227ENST00000560970 CD28P10747 220 aa8.62□□□□□ -1.03
TPM1-227ENST00000560970 CDK2P24941 298 aa8.62□□□□□ -1.03
TPM1-227ENST00000560970 TGFBR1P36897 503 aa8.62□□□□□ -1.03
TPM1-227ENST00000560970 CLDN12P56749 244 aa8.62□□□□□ -1.03
TPM1-227ENST00000560970 PLA2G7Q13093 441 aa8.62□□□□□ -1.03
TPM1-227ENST00000560970 ZNF846Q147U1 533 aa8.62□□□□□ -1.03
TPM1-227ENST00000560970 ARSJQ5FYB0 599 aaPredicted RBP8.62□□□□□ -1.03
TPM1-227ENST00000560970 ATAD3CQ5T2N8 411 aa8.62□□□□□ -1.03
TPM1-227ENST00000560970 ZNF626Q68DY1 528 aa8.62□□□□□ -1.03
TPM1-227ENST00000560970 NR2C2APQ86WQ0 139 aa8.62□□□□□ -1.03
TPM1-227ENST00000560970 CROCCP3Q8IVE0 287 aa8.62□□□□□ -1.03
TPM1-227ENST00000560970 DYNAPQ8N1N2 210 aa8.62□□□□□ -1.03
TPM1-227ENST00000560970 OR6M1Q8NGM8 313 aa8.62□□□□□ -1.03
TPM1-227ENST00000560970 MRGPRDQ8TDS7 321 aa8.62□□□□□ -1.03
TPM1-227ENST00000560970 WIPF2Q8TF74 440 aaPredicted RBP8.62□□□□□ -1.03
TPM1-227ENST00000560970 MRPS24Q96EL2 167 aaKnown RBP8.62□□□□□ -1.03
TPM1-227ENST00000560970 CITED2Q99967 270 aaPredicted RBP8.62□□□□□ -1.03
TPM1-227ENST00000560970 NICN1Q9BSH3 213 aa8.62□□□□□ -1.03
TPM1-227ENST00000560970 RNF167Q9H6Y7 350 aa8.62□□□□□ -1.03
TPM1-227ENST00000560970 AKIP1Q9NQ31 210 aa8.62□□□□□ -1.03
TPM1-227ENST00000560970 TAS2R3Q9NYW6 316 aa8.62□□□□□ -1.03
TPM1-227ENST00000560970 GHRLQ9UBU3 117 aa8.62□□□□□ -1.03
TPM1-227ENST00000560970 PEX16Q9Y5Y5 336 aa8.62□□□□□ -1.03
TPM1-227ENST00000560970 TRAV1-2A0A0B4J238 106 aa8.61□□□□□ -1.03
TPM1-227ENST00000560970 A6NDX4 124 aa8.61□□□□□ -1.03
TPM1-227ENST00000560970 FAM90A10PA6NDY2 464 aa8.61□□□□□ -1.03
TPM1-227ENST00000560970 FAM90A18PA6NE21 464 aa8.61□□□□□ -1.03
TPM1-227ENST00000560970 FAM90A16PA6NEW6 464 aa8.61□□□□□ -1.03
TPM1-227ENST00000560970 FAM90A20PA6NIJ5 464 aa8.61□□□□□ -1.03
TPM1-227ENST00000560970 FAM90A8PA6NJQ4 464 aa8.61□□□□□ -1.03
TPM1-227ENST00000560970 FAM90A7PA6NKC0 464 aa8.61□□□□□ -1.03
TPM1-227ENST00000560970 FAM90A22PA8MWA6 464 aa8.61□□□□□ -1.03
TPM1-227ENST00000560970 FAM90A12PA8MX19 464 aa8.61□□□□□ -1.03
TPM1-227ENST00000560970 FAM90A5PA8MXJ8 464 aa8.61□□□□□ -1.03
TPM1-227ENST00000560970 FAM90A23PA8MXZ1 464 aa8.61□□□□□ -1.03
TPM1-227ENST00000560970 F2RL2O00254 374 aa8.61□□□□□ -1.03
TPM1-227ENST00000560970 BPNT1O95861 308 aa8.61□□□□□ -1.03
TPM1-227ENST00000560970 FAM90A15PP0C7V4 464 aa8.61□□□□□ -1.03
TPM1-227ENST00000560970 FAM90A13PP0C7W8 464 aa8.61□□□□□ -1.03
TPM1-227ENST00000560970 FAM90A14PP0C7W9 464 aa8.61□□□□□ -1.03
TPM1-227ENST00000560970 FAM90A24PP0C7X0 464 aa8.61□□□□□ -1.03
TPM1-227ENST00000560970 UBBP0CG47 229 aa8.61□□□□□ -1.03
TPM1-227ENST00000560970 SSTR5P35346 364 aa8.61□□□□□ -1.03
TPM1-227ENST00000560970 VDAC2P45880 294 aaPredicted RBP8.61□□□□□ -1.03
TPM1-227ENST00000560970 KCNJ3P48549 501 aa8.61□□□□□ -1.03
TPM1-227ENST00000560970 RORCP51449 518 aa8.61□□□□□ -1.03
TPM1-227ENST00000560970 RPS27AP62979 156 aaKnown RBP8.61□□□□□ -1.03
TPM1-227ENST00000560970 RAB11BQ15907 218 aa8.61□□□□□ -1.03
TPM1-227ENST00000560970 HES5Q5TA89 166 aa8.61□□□□□ -1.03
TPM1-227ENST00000560970 RAB12Q6IQ22 244 aa8.61□□□□□ -1.03
TPM1-227ENST00000560970 HEPN1Q6WQI6 88 aa8.61□□□□□ -1.03
TPM1-227ENST00000560970 ZNF497Q6ZNH5 498 aa8.61□□□□□ -1.03
TPM1-227ENST00000560970 TMEM219Q86XT9 240 aa8.61□□□□□ -1.03
TPM1-227ENST00000560970 OR13D1Q8NGV5 346 aa8.61□□□□□ -1.03
TPM1-227ENST00000560970 AP3S1Q92572 193 aa8.61□□□□□ -1.03
TPM1-227ENST00000560970 SLC25A46Q96AG3 418 aa8.61□□□□□ -1.03
TPM1-227ENST00000560970 TM2D1Q9BX74 207 aa8.61□□□□□ -1.03
TPM1-227ENST00000560970 TMEM59Q9BXS4 323 aa8.61□□□□□ -1.03
TPM1-227ENST00000560970 PRSS22Q9GZN4 317 aa8.61□□□□□ -1.03
TPM1-227ENST00000560970 WNT10AQ9GZT5 417 aa8.61□□□□□ -1.03
TPM1-227ENST00000560970 CST11Q9H112 138 aa8.61□□□□□ -1.03
TPM1-227ENST00000560970 TMEM133Q9H2Q1 129 aa8.61□□□□□ -1.03
TPM1-227ENST00000560970 GAL3ST2Q9H3Q3 398 aa8.61□□□□□ -1.03
TPM1-227ENST00000560970 ZNF286AQ9HBT8 521 aa8.61□□□□□ -1.03
TPM1-227ENST00000560970 PCDHB16Q9NRJ7 776 aa8.61□□□□□ -1.03
TPM1-227ENST00000560970 CALYQ9NYX4 217 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms