RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 RHBDL1O75783 438 aa11.54□□□□□ -0.56
CSPG4P11-201ENST00000560634 SRP14P37108 136 aaKnown RBP11.54□□□□□ -0.56
CSPG4P11-201ENST00000560634 MGAT2Q10469 447 aa11.54□□□□□ -0.56
CSPG4P11-201ENST00000560634 GGTLC2Q14390 218 aa11.54□□□□□ -0.56
CSPG4P11-201ENST00000560634 SPINK14Q6IE38 97 aa11.54□□□□□ -0.56
CSPG4P11-201ENST00000560634 MARS2Q96GW9 593 aaKnown RBP11.54□□□□□ -0.56
CSPG4P11-201ENST00000560634 ABHD14BQ96IU4 210 aa11.54□□□□□ -0.56
CSPG4P11-201ENST00000560634 SPTA1P02549 2419 aa11.54□□□□□ -0.56
CSPG4P11-201ENST00000560634 ADAD2Q8NCV1 583 aaKnown RBP11.54□□□□□ -0.56
CSPG4P11-201ENST00000560634 ADAMTS17Q8TE56 1095 aa11.54□□□□□ -0.56
CSPG4P11-201ENST00000560634 OR4C12Q96R67 309 aa11.54□□□□□ -0.56
CSPG4P11-201ENST00000560634 ST6GALNAC2Q9UJ37 374 aa11.54□□□□□ -0.56
CSPG4P11-201ENST00000560634 TUBD1Q9UJT1 453 aa11.54□□□□□ -0.56
CSPG4P11-201ENST00000560634 PAM16Q9Y3D7 125 aa11.54□□□□□ -0.56
CSPG4P11-201ENST00000560634 HPRT1P00492 218 aa11.54□□□□□ -0.56
CSPG4P11-201ENST00000560634 SELENOTP62341 195 aa11.54□□□□□ -0.56
CSPG4P11-201ENST00000560634 VN1R17PQ8TDU5 208 aa11.54□□□□□ -0.56
CSPG4P11-201ENST00000560634 POM121Q96HA1 1249 aa11.54□□□□□ -0.56
CSPG4P11-201ENST00000560634 TJP1Q07157 1748 aa11.54□□□□□ -0.56
CSPG4P11-201ENST00000560634 COL18A1P39060 1754 aa11.54□□□□□ -0.56
CSPG4P11-201ENST00000560634 MFAP2P55001 183 aa11.54□□□□□ -0.56
CSPG4P11-201ENST00000560634 M0R3E3 92 aa11.53□□□□□ -0.56
CSPG4P11-201ENST00000560634 PTP4A3O75365 173 aa11.53□□□□□ -0.56
CSPG4P11-201ENST00000560634 HIST1H1BP16401 226 aaKnown RBP11.53□□□□□ -0.56
CSPG4P11-201ENST00000560634 FSTP19883 344 aa11.53□□□□□ -0.56
CSPG4P11-201ENST00000560634 CD1BP29016 333 aa11.53□□□□□ -0.56
CSPG4P11-201ENST00000560634 PRSS12P56730 875 aa11.53□□□□□ -0.56
CSPG4P11-201ENST00000560634 ZP4Q12836 540 aa11.53□□□□□ -0.56
CSPG4P11-201ENST00000560634 KCNMB1Q16558 191 aa11.53□□□□□ -0.56
CSPG4P11-201ENST00000560634 FBXW9Q5XUX1 488 aa11.53□□□□□ -0.56
CSPG4P11-201ENST00000560634 OR8A1Q8NGG7 326 aa11.53□□□□□ -0.56
CSPG4P11-201ENST00000560634 RND1Q92730 232 aa11.53□□□□□ -0.56
CSPG4P11-201ENST00000560634 TBX15Q96SF7 602 aa11.53□□□□□ -0.56
CSPG4P11-201ENST00000560634 MYH14Q7Z406 1995 aaKnown RBP11.53□□□□□ -0.56
CSPG4P11-201ENST00000560634 A0A0U1RQV5 110 aa11.53□□□□□ -0.56
CSPG4P11-201ENST00000560634 TMEM238LA0A1B0GVL6 79 aa11.53□□□□□ -0.56
CSPG4P11-201ENST00000560634 A6NJY4 79 aa11.53□□□□□ -0.56
CSPG4P11-201ENST00000560634 HYPMO75409 117 aa11.53□□□□□ -0.56
CSPG4P11-201ENST00000560634 CYB5R3P00387 301 aaPredicted RBP11.53□□□□□ -0.56
CSPG4P11-201ENST00000560634 CLDN18P56856 261 aa11.53□□□□□ -0.56
CSPG4P11-201ENST00000560634 TRIP6Q15654 476 aaKnown RBP11.53□□□□□ -0.56
CSPG4P11-201ENST00000560634 ZNF784Q8NCA9 323 aaPredicted RBP11.53□□□□□ -0.56
CSPG4P11-201ENST00000560634 FAM222BQ8WU58 562 aa11.53□□□□□ -0.56
CSPG4P11-201ENST00000560634 ZNF256Q9Y2P7 627 aaPredicted RBP11.53□□□□□ -0.56
CSPG4P11-201ENST00000560634 SHROOM3Q8TF72 1996 aa11.53□□□□□ -0.56
CSPG4P11-201ENST00000560634 SEC16AO15027 2179 aa11.53□□□□□ -0.56
CSPG4P11-201ENST00000560634 DDX60Q8IY21 1712 aaKnown RBP11.53□□□□□ -0.56
CSPG4P11-201ENST00000560634 PSG2P11465 335 aa11.53□□□□□ -0.56
CSPG4P11-201ENST00000560634 HOXA4Q00056 320 aaPredicted RBP11.53□□□□□ -0.56
CSPG4P11-201ENST00000560634 OVCH2Q7RTZ1 564 aa11.53□□□□□ -0.56
CSPG4P11-201ENST00000560634 GBGT1Q8N5D6 347 aa11.53□□□□□ -0.56
CSPG4P11-201ENST00000560634 PTPMT1Q8WUK0 201 aaPredicted RBP11.53□□□□□ -0.56
CSPG4P11-201ENST00000560634 ADAT3Q96EY9 351 aaPredicted RBP11.53□□□□□ -0.56
CSPG4P11-201ENST00000560634 PAXXQ9BUH6 204 aa11.53□□□□□ -0.56
CSPG4P11-201ENST00000560634 WDR54Q9H977 334 aa11.53□□□□□ -0.56
CSPG4P11-201ENST00000560634 USP54Q70EL1 1684 aa11.53□□□□□ -0.56
CSPG4P11-201ENST00000560634 TMEM265A0A087WTH1 108 aa11.53□□□□□ -0.56
CSPG4P11-201ENST00000560634 ZNF735P0CB33 412 aa11.53□□□□□ -0.56
CSPG4P11-201ENST00000560634 RBM11P57052 281 aaKnown RBP11.53□□□□□ -0.56
CSPG4P11-201ENST00000560634 PIGYQ3MUY2 71 aa11.53□□□□□ -0.56
CSPG4P11-201ENST00000560634 FAM27BQ5VT28 67 aa11.53□□□□□ -0.56
CSPG4P11-201ENST00000560634 KCNMB2Q9Y691 235 aa11.53□□□□□ -0.56
CSPG4P11-201ENST00000560634 CRXO43186 299 aaPredicted RBP11.52□□□□□ -0.56
CSPG4P11-201ENST00000560634 CELA2BP08218 269 aaPredicted RBP11.52□□□□□ -0.56
CSPG4P11-201ENST00000560634 ID1P41134 155 aa11.52□□□□□ -0.56
CSPG4P11-201ENST00000560634 SPANXN1Q5VSR9 72 aa11.52□□□□□ -0.56
CSPG4P11-201ENST00000560634 RALYQ9UKM9 306 aaKnown RBP11.52□□□□□ -0.56
CSPG4P11-201ENST00000560634 A0A1W2PPC1 479 aa11.52□□□□□ -0.57
CSPG4P11-201ENST00000560634 RELBQ01201 579 aa11.52□□□□□ -0.57
CSPG4P11-201ENST00000560634 APOBEC4Q8WW27 367 aaKnown RBP11.52□□□□□ -0.57
CSPG4P11-201ENST00000560634 GHITMQ9H3K2 345 aa11.52□□□□□ -0.57
CSPG4P11-201ENST00000560634 RAB29O14966 203 aa11.52□□□□□ -0.57
CSPG4P11-201ENST00000560634 COX6CP09669 75 aa11.52□□□□□ -0.57
CSPG4P11-201ENST00000560634 LIFP15018 202 aa11.52□□□□□ -0.57
CSPG4P11-201ENST00000560634 SPEM2Q0P670 501 aa11.52□□□□□ -0.57
CSPG4P11-201ENST00000560634 HES3Q5TGS1 186 aa11.52□□□□□ -0.57
CSPG4P11-201ENST00000560634 ZAR1Q86SH2 424 aa11.52□□□□□ -0.57
CSPG4P11-201ENST00000560634 TMEM252Q8N6L7 170 aa11.52□□□□□ -0.57
CSPG4P11-201ENST00000560634 DEFB124Q8NES8 71 aa11.52□□□□□ -0.57
CSPG4P11-201ENST00000560634 SCNM1Q9BWG6 230 aa11.52□□□□□ -0.57
CSPG4P11-201ENST00000560634 HIGD1AQ9Y241 93 aa11.52□□□□□ -0.57
CSPG4P11-201ENST00000560634 SLX4Q8IY92 1834 aa11.52□□□□□ -0.57
CSPG4P11-201ENST00000560634 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.52□□□□□ -0.57
CSPG4P11-201ENST00000560634 HSPB1P04792 205 aaKnown RBP11.52□□□□□ -0.57
CSPG4P11-201ENST00000560634 NGFRP08138 427 aa11.52□□□□□ -0.57
CSPG4P11-201ENST00000560634 KIR3DL2P43630 455 aa11.52□□□□□ -0.57
CSPG4P11-201ENST00000560634 GZMMP51124 257 aa11.52□□□□□ -0.57
CSPG4P11-201ENST00000560634 ZNF738Q8NE65 137 aa11.52□□□□□ -0.57
CSPG4P11-201ENST00000560634 MEGF10Q96KG7 1140 aa11.52□□□□□ -0.57
CSPG4P11-201ENST00000560634 RBM14Q96PK6 669 aaKnown RBP11.52□□□□□ -0.57
CSPG4P11-201ENST00000560634 CLN8Q9UBY8 286 aa11.52□□□□□ -0.57
CSPG4P11-201ENST00000560634 MAGEA5P43359 124 aa11.51□□□□□ -0.57
CSPG4P11-201ENST00000560634 EFNB2P52799 333 aa11.51□□□□□ -0.57
CSPG4P11-201ENST00000560634 C1orf210Q8IVY1 113 aa11.51□□□□□ -0.57
CSPG4P11-201ENST00000560634 A0A1B0GUL6 1792 aa11.51□□□□□ -0.57
CSPG4P11-201ENST00000560634 MGST3O14880 152 aa11.51□□□□□ -0.57
CSPG4P11-201ENST00000560634 EML2O95834 649 aa11.51□□□□□ -0.57
CSPG4P11-201ENST00000560634 MGPP08493 103 aa11.51□□□□□ -0.57
CSPG4P11-201ENST00000560634 FCGR3AP08637 254 aa11.51□□□□□ -0.57
CSPG4P11-201ENST00000560634 ZNF273Q14593 569 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms