RNA–Protein interactions for RNA: ENST00000560435.1

SPG11-222, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-222ENST00000560435 PCOTHQ58A44 107 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 CENPWQ5EE01 88 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 OR10J3Q5JRS4 329 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 TIMM23BQ5SRD1 257 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 HENMT1Q5T8I9 393 aaKnown RBP0.31□□□□□ -2.36
SPG11-222ENST00000560435 NOXRED1Q6NXP6 359 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 EBLN2Q6P2I7 272 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 Q6ZRU5 148 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 OLIG3Q7RTU3 272 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 SCXQ7RTU7 201 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 VN1R4Q7Z5H5 301 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 LRRC6Q86X45 466 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 C10orf107Q8IVU9 208 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 YIPF7Q8N8F6 280 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 FER1L6-AS1Q8NA97 138 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 OR11G2Q8NGC1 345 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 OR8K1Q8NGG5 319 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 OR5K1Q8NHB7 308 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 SUN5Q8TC36 379 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 DYNC2LI1Q8TCX1 351 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 CD200R1Q8TD46 325 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 DTD1Q8TEA8 209 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 OR5P3Q8WZ94 311 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 DDIT4LQ96D03 193 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 MRAP2Q96G30 205 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 PGLYRP3Q96LB9 341 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 CATSPER2Q96P56 530 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 TBX5Q99593 518 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 TAPBPLQ9BX59 468 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 UGT2B28Q9BY64 529 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 GNB1LQ9BYB4 327 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 FBXL15Q9H469 300 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 C11orf49Q9H6J7 331 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 METTL17Q9H7H0 456 aaPredicted RBP0.31□□□□□ -2.36
SPG11-222ENST00000560435 UBQLN4Q9NRR5 601 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 NAGKQ9UJ70 344 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 SCML1Q9UN30 329 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 CCL26Q9Y258 94 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 STK38LQ9Y2H1 464 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 OR51B4Q9Y5P0 310 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 URGCP-MRPS24S4R325 110 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 HSPE1-MOB4S4R3N1 261 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 ADGRB3O60242 1522 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 MYO15BQ96JP2 1530 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 COL18A1P39060 1754 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 LTBP2Q14767 1821 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 RAB3GAP2Q9H2M9 1393 aa0.31□□□□□ -2.36
SPG11-222ENST00000560435 PTPRKQ15262 1439 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 YLPM1P49750 1951 aaKnown RBP0.3□□□□□ -2.36
SPG11-222ENST00000560435 ICE1Q9Y2F5 2266 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 MUC21A0A0G2JKD1 596 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 MUC21A0A140T8X8 626 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 KNCNA6PVL3 124 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 HSBP1L1C9JCN9 74 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 F8VZ95 297 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 LY6LH3BQJ8 138 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 GOLGA8RI6L899 631 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 GPR171O14626 319 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 SLC25A20O43772 301 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 MPZL2O60487 215 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 PSIP1O75475 530 aaKnown RBP0.3□□□□□ -2.36
SPG11-222ENST00000560435 IGLV3-27P01718 113 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 IGKV1-16P04430 117 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 GYPCP04921 128 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 CBR1P16152 277 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 ZNF3P17036 446 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 ATF1P18846 271 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 CRABP2P29373 138 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 KDELR2P33947 212 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 CBX5P45973 191 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 GABRA4P48169 554 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 HSPA13P48723 471 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 PSMB3P49720 205 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 DLX6P56179 175 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 SNAP25P60880 206 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 FGF12P61328 243 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 MGAT3Q09327 533 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 XRCC4Q13426 336 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 TMED1Q13445 227 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 RAB31Q13636 194 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 FLOT2Q14254 428 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 PDGFRLQ15198 375 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 CST6Q15828 149 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 EXOC3L4Q17RC7 722 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 ZNF181Q2M3W8 571 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 FAM45BPQ6NSW5 357 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 NIPAL1Q6NVV3 410 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 SDIM1Q6ZPB5 146 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 ZNF767PQ75MW2 155 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 TCF23Q7RTU1 214 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 C2orf73Q8N5S3 287 aaPredicted RBP0.3□□□□□ -2.36
SPG11-222ENST00000560435 OR52E4Q8NGH9 312 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 OR5L1Q8NGL2 311 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 OR4P4Q8NGL7 312 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 OR51H1Q8NH63 302 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 OR2V1Q8NHB1 315 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 MFSD8Q8NHS3 518 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 RNASEH2CQ8TDP1 164 aaKnown RBP0.3□□□□□ -2.36
SPG11-222ENST00000560435 IFT81Q8WYA0 676 aa0.3□□□□□ -2.36
SPG11-222ENST00000560435 HIST1H2BAQ96A08 127 aa0.3□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms